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2,614 results for “RNA-seq analysis”

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geo20/100

Transcriptomic analysis of HIV-associated nephropathy (Tg26) mouse kidney [single-nuclear RNA-seq]

GEO Series GSE205059. Mus musculus. 8 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenMay 2024View details →
geo20/100

Next Generation Sequencing Facilitates Quantitative Analysis of in 14-day-old wt, syd-5 and swi3d-1 seedlings [RNA-seq]

GEO Series GSE218842. Arabidopsis. 9 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenApr 2023View details →
geo20/100

RNA-Seq analysis of germinal center B cells from Tfr-depleted and control kidney transplant recipients

GEO Series GSE286974. Mus musculus. 10 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenFeb 2025View details →
geo20/100

Bulk RNA-seq analysis of WT and MPI MT LX-2 cells

GEO Series GSE193043. Homo sapiens. 6 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenMar 2022View details →
geo20/100

Gene expression analysis upon mtDNA depletion [RNA-seq]

GEO Series GSE100132. Homo sapiens. 12 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenMar 2018View details →
geo20/100

RNA-Seq analysis of CD115- monocytes and CD115+ monocytes from naïve and tumor-bearing mice

GEO Series GSE199008. Mus musculus. 8 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenMar 2022View details →
geo20/100

RNA-seq analysis of A2780 and OVCAR3 human ovarian cancer cell lines after overexpression of collagen type XI alpha 1 (COL11A1)

GEO Series GSE112985. Homo sapiens. 6 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenOct 2019View details →
geo20/100

single cell RNA-seq analysis of H9-derived expandable hepatoblast organoids and their derivatitives of functional polarized hepatocyte organoids under 3D suspended culture conditions

GEO Series GSE240097. Homo sapiens. 2 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenDec 2024View details →
geo20/100

Transcriptomic analysis of transgenic mouse kidney glomeruli with HIV-associated nephropathy (Tg26) and human APOL1 variants expression [bulk RNA-seq]

GEO Series GSE227234. Mus musculus. 34 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenMay 2024View details →
geo20/100

Human gastric cancer cell line; RNA-seq analysis of SNU-16 clones cells

GEO Series GSE285828. Homo sapiens. 3 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenJan 2025View details →
geo20/100

RNA-seq analysis of wildtype and GPD2 knockout cancer cells

GEO Series GSE197257. Mus musculus. 6 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenMar 2022View details →
geo20/100

RNA-seq analysis in ARIEL knockdown Jurkat samples

GEO Series GSE112077. Homo sapiens. 4 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenMay 2019View details →
geo20/100

Single-cell RNA-seq analysis of cervical lymph nodes from mice intradermally infected with Mycobacterium tuberculosis

GEO Series GSE300819. Mus musculus. 6 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenNov 2025View details →
geo20/100

RNAseq analysis of the herbicide propyzamide on a pre-clinical model of IBD on Mouse using single cell RNA-Seq II

GEO Series GSE194411. Mus musculus. 4 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenOct 2022View details →
geo20/100

Exploring transcriptional regulation of Mycobacterium avium subsp. paratuberculosis after human THP-1 cell infection via dual RNA-seq analysis

GEO Series GSE199476. Homo sapiens; Mycobacterium avium subsp. paratuberculosis K-10. 6 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenSep 2022View details →
geo20/100

RNA-seq analysis of ex vivo microtumor models comprising control or Arpc4 knockout (KO) PDAC cells

GEO Series GSE284423. Mus musculus. 18 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenDec 2025View details →
geo20/100

Small RNAseq analysis of C.elegans from Parental P0 to F3 generations under hypoxic stress in both WT and hrde-1 mutant [small RNA-seq]

GEO Series GSE188270. Caenorhabditis elegans. 32 samples. Type: Non-coding RNA profiling by high throughput sequencing.

openGEO-OpenDec 2022View details →
geo20/100

Bulk RNA-seq analysis in pulmonary endothelial cells between saline and LPS group, WT (Fgfr1loxp/loxp) and endothelial Fgfr1-conditional knock out mice (Fgfr1iΔEC/iΔEC mice).

GEO Series GSE216635. Mus musculus. 16 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenMar 2023View details →
geo20/100

RNA-seq analysis of single cells of the oligodendrocyte lineage from nine distinct regions of the anterior-posterior and dorsal-ventral axis of the mouse juvenile central nervous system

GEO Series GSE75330. Mus musculus. 5069 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenJun 2016View details →
geo20/100

RNA-seq analysis of RRN3 knockdown in HCT116 cells

GEO Series GSE282213. Homo sapiens. 6 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenMay 2025View details →

ScienceDex guides

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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.

Compare curated datasets

Allen Brain Atlas

Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.

allen-brain-atlas
neuroscienceopenDocumentation, web resources, and API references are available online.
Last verified 2026-04-30Open record

Annotated Behaviour and Observability Dataset (ABODe)

ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.

abode-home-cage
behavioral-neuroscienceopenThe DataShare record exposes download links for annotations, documentation, license text, and the zipped per-snippet data directory.
Last verified 2026-04-30Open record

DANDI Archive for NWB datasets

DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.

dandi-nwb
electrophysiologyopenPublished Dandiset metadata and archive endpoints are available through the production DANDI API.
Last verified 2026-04-30Open record

International Brain Laboratory public data

The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.

ibl
behavioral-neuroscienceopenPublic sessions can be searched and loaded from the IBL public data server through ONE.
Last verified 2026-04-29Open record

OpenNeuro

OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.

openneuro
neuroscienceopenPublished datasets are available on demand over the internet.
Last verified 2026-04-29Open record