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Figure 5 from: Hedin M, Derkarabetian S, Blair J, Paquin P (2018) Sequence capture phylogenomics of eyeless Cicurina spiders from Texas caves, with emphasis on US federally-endangered species from Bexar County (Araneae, Hahniidae). ZooKeys 769: 49-76. https://doi.org/10.3897/zookeys.769.25814

Figure 5 Distribution of C. madla and C. cf. madla in Bexar and adjacent counties, with corresponding 399_70 RAxML UCE phylogeny (not all bootstrap values shown). Different geographic populations designated by different colors. Cave locations approximate.

opencc-by-4.0Jul 2018View details →
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Figure 12 from: Hedin M, Derkarabetian S, Blair J, Paquin P (2018) Sequence capture phylogenomics of eyeless Cicurina spiders from Texas caves, with emphasis on US federally-endangered species from Bexar County (Araneae, Hahniidae). ZooKeys 769: 49-76. https://doi.org/10.3897/zookeys.769.25814

Figure 12 Male palpal morphology of C. madla and C. vespera (left palp, ventral view). Specimens from Stevens Ranch Trash Hole Cave (CIC_1745) and Robbers Cave (TX_241) from PP personal collection. Image of specimen TK_188519 from Joel Ledford. Abbreviations: CB = cymbium, T = tegulum, E = embolus. Scale bar: 0.5 mm.

opencc-by-4.0Jul 2018View details →
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Figure 1 from: Hedin M, Derkarabetian S, Blair J, Paquin P (2018) Sequence capture phylogenomics of eyeless Cicurina spiders from Texas caves, with emphasis on US federally-endangered species from Bexar County (Araneae, Hahniidae). ZooKeys 769: 49-76. https://doi.org/10.3897/zookeys.769.25814

Figure 1 Phylogenetic tree from RAxML analysis of 399 UCE loci, 70% (399_70) occupancy matrix. Bootstrap values below 75 not shown. Geography and morphology highlighted. Abbreviations: ME (= mostly elongate) spermathecae clade, R (= rounded) spermathecae clade. Further details regarding specimen codes and locations found in Suppl. material 5. Inset: sampled Texas counties.

opencc-by-4.0Jul 2018View details →
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Figure 9 from: Hedin M, Derkarabetian S, Blair J, Paquin P (2018) Sequence capture phylogenomics of eyeless Cicurina spiders from Texas caves, with emphasis on US federally-endangered species from Bexar County (Araneae, Hahniidae). ZooKeys 769: 49-76. https://doi.org/10.3897/zookeys.769.25814

Figure 9 Morphology of adult C. loftini with corresponding 399_70 UCE RAxML phylogeny. Imaged specimens highlighted on phylogeny; images of specimen TK_188520 from J. Ledford, specimen TK_188686 from J. Cokendolpher (via Symbiota Collections of Arthropods Network). Scale bar: 0.5 mm.

opencc-by-4.0Jul 2018View details →
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Figure 8 from: Hedin M, Derkarabetian S, Blair J, Paquin P (2018) Sequence capture phylogenomics of eyeless Cicurina spiders from Texas caves, with emphasis on US federally-endangered species from Bexar County (Araneae, Hahniidae). ZooKeys 769: 49-76. https://doi.org/10.3897/zookeys.769.25814

Figure 8 Distribution of R clade in Bexar and Comal counties, with corresponding 399_70 UCE RAxML phylogeny. Different species designated by different colors. Cave locations approximate.

opencc-by-4.0Jul 2018View details →
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Figure 7 from: Hedin M, Derkarabetian S, Blair J, Paquin P (2018) Sequence capture phylogenomics of eyeless Cicurina spiders from Texas caves, with emphasis on US federally-endangered species from Bexar County (Araneae, Hahniidae). ZooKeys 769: 49-76. https://doi.org/10.3897/zookeys.769.25814

Figure 7 Morphology of R clade with corresponding 399_70 UCE RAxML phylogeny (not all bootstrap values shown). Holotype female spermathecal images from Paquin and Dupérré (2009), used with permission. Images not to scale.

opencc-by-4.0Jul 2018View details →
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Figure 4 from: Hedin M, Derkarabetian S, Blair J, Paquin P (2018) Sequence capture phylogenomics of eyeless Cicurina spiders from Texas caves, with emphasis on US federally-endangered species from Bexar County (Araneae, Hahniidae). ZooKeys 769: 49-76. https://doi.org/10.3897/zookeys.769.25814

Figure 4 Morphology of ME clade with corresponding 399_70 UCE RAxML phylogeny (not all bootstrap values shown). Holotype female spermathecal images from Paquin and Dupérré (2009), used with permission. Images not to scale.

opencc-by-4.0Jul 2018View details →
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Figure 3 from: Hedin M, Derkarabetian S, Blair J, Paquin P (2018) Sequence capture phylogenomics of eyeless Cicurina spiders from Texas caves, with emphasis on US federally-endangered species from Bexar County (Araneae, Hahniidae). ZooKeys 769: 49-76. https://doi.org/10.3897/zookeys.769.25814

Figure 3 Phylogenetic tree from RAxML analysis of COI mitochondrial data. Previously published sequences with corresponding GenBank numbers (AY#), some with cave location codes as in Paquin and Hedin (2004). Bootstrap values above 70 shown only for major lineages. Bootstrap values within C. madla shown on Figure 6, those for C. loftini shown on Figure 10.

opencc-by-4.0Jul 2018View details →
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Figure 11 from: Hedin M, Derkarabetian S, Blair J, Paquin P (2018) Sequence capture phylogenomics of eyeless Cicurina spiders from Texas caves, with emphasis on US federally-endangered species from Bexar County (Araneae, Hahniidae). ZooKeys 769: 49-76. https://doi.org/10.3897/zookeys.769.25814

Figure 11 Anomalous geographic distribution of C. venii and C. vespera type specimens. All views ventral.

opencc-by-4.0Jul 2018View details →
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Figure 10 from: Hedin M, Derkarabetian S, Blair J, Paquin P (2018) Sequence capture phylogenomics of eyeless Cicurina spiders from Texas caves, with emphasis on US federally-endangered species from Bexar County (Araneae, Hahniidae). ZooKeys 769: 49-76. https://doi.org/10.3897/zookeys.769.25814

Figure 10 Distribution of C. loftini in Culebra Anticline KFR, with corresponding COI RAxML phylogeny. Different mtDNA microclades designated by different colors. Cave locations approximate.

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Figure 2 from: Hedin M, Derkarabetian S, Blair J, Paquin P (2018) Sequence capture phylogenomics of eyeless Cicurina spiders from Texas caves, with emphasis on US federally-endangered species from Bexar County (Araneae, Hahniidae). ZooKeys 769: 49-76. https://doi.org/10.3897/zookeys.769.25814

Figure 2 Phylogenetic tree from BEAST analysis of 399_70 UCE matrix. Posterior probability values above 0.95 shown. Inset: Boxplots of TI values (from Suppl. material 6) for ME and R clade members from Bexar County (for ME clade, two small juveniles and Stahl Cave specimens not included).

opencc-by-4.0Jul 2018View details →
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Figure 3 from: Murase A, Miki R, Wada M, Itou M, Motomura H, Senou H (2018) Review of the Japanese records of an endangered grouper, Epinephelus tukula, with comments on its population status (Teleostei, Serranidae). ZooKeys 772: 153-163. https://doi.org/10.3897/zookeys.772.24374

Figure 3 An adult individual of Epinephelus tukula (ca 100 cm TL, photo number KPM-NR 179394A) landed at Meitsu Fishing Port, Nichinan City, Miyazaki Prefecture, eastern coast of Kyushu, southern Japan. Photograph R. Miki, 17 May 2012.

opencc-by-4.0Jul 2018View details →
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Figure 2 from: Murase A, Miki R, Wada M, Itou M, Motomura H, Senou H (2018) Review of the Japanese records of an endangered grouper, Epinephelus tukula, with comments on its population status (Teleostei, Serranidae). ZooKeys 772: 153-163. https://doi.org/10.3897/zookeys.772.24374

Figure 2 Distribution map of Epinephelus tukula in Japanese waters. Key: solid circle, specimen records from the present study; open circle, photo records from the present study; solid triangle, voucher (specimen or photo) records from the past studies; open triangle, literature records without any vouchers or web records. Arrow showing the course of Kuroshio Current.

opencc-by-4.0Jul 2018View details →
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Figure 1 from: Murase A, Miki R, Wada M, Itou M, Motomura H, Senou H (2018) Review of the Japanese records of an endangered grouper, Epinephelus tukula, with comments on its population status (Teleostei, Serranidae). ZooKeys 772: 153-163. https://doi.org/10.3897/zookeys.772.24374

Figure 1 Color images of Epinephelus tukula (KPM-NI 42540, 544.0 mm SL) captured at Kadogawa Bay, Miyazaki Prefecture, eastern coast of Kyushu, southern Japan: A lateral view of fresh specimen (photo number KPM-NR 180045A, photo by H. Senou) B lateral view of live condition in a market tank (KPM-NR 180045E, R. Miki) C frontal view of live condition in a market tank (KPM-NR 180045D, R. Miki).

opencc-by-4.0Jul 2018View details →
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Figure 4 from: Costa WJEM, Amorim PF, Mattos JLO (2018) Cryptic species diversity in the Hypsolebias magnificus complex, a clade of endangered seasonal killifishes from the São Francisco River basin, Brazilian Caatinga (Cyprinodontiformes, Aplocheilidae). ZooKeys 777: 141-158. https://doi.org/10.3897/zookeys.777.25058

Figure 4 Hypsolebiashamadryades sp. n. A live holotype, UFRJ 6893, male, 26.9 mm SL (caudal fin damaged and regenerated) B live paratype, UFRJ 6895, female, 21.2 mm SL. Photographs by WJEM Costa.

opencc-by-4.0Aug 2018View details →
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Figure 3 from: Costa WJEM, Amorim PF, Mattos JLO (2018) Cryptic species diversity in the Hypsolebias magnificus complex, a clade of endangered seasonal killifishes from the São Francisco River basin, Brazilian Caatinga (Cyprinodontiformes, Aplocheilidae). ZooKeys 777: 141-158. https://doi.org/10.3897/zookeys.777.25058

Figure 3 Localities of specimens belonging to species of the Hypsolebiasmagnificus complex used in this study: black dot, H.hamadryades; white dot, H.magnificus; red dot, H.gardneri; yellow dot, H.harmonicus; blue dot, H.picturatus.

opencc-by-4.0Aug 2018View details →
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Figure 2 from: Costa WJEM, Amorim PF, Mattos JLO (2018) Cryptic species diversity in the Hypsolebias magnificus complex, a clade of endangered seasonal killifishes from the São Francisco River basin, Brazilian Caatinga (Cyprinodontiformes, Aplocheilidae). ZooKeys 777: 141-158. https://doi.org/10.3897/zookeys.777.25058

Figure 2 Hypsolebiasgardneri sp. n. A live holotype, UFRJ 11859, male, 36.9 mm SLB live paratype, UFRJ 6797, female, 30.0 mm SL. Photographs by WJEM Costa.

opencc-by-4.0Aug 2018View details →
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Figure 1 from: Costa WJEM, Amorim PF, Mattos JLO (2018) Cryptic species diversity in the Hypsolebias magnificus complex, a clade of endangered seasonal killifishes from the São Francisco River basin, Brazilian Caatinga (Cyprinodontiformes, Aplocheilidae). ZooKeys 777: 141-158. https://doi.org/10.3897/zookeys.777.25058

Figure 1 Bayesian phylogeny used to delimit species of the Hypsolebiasmagnificus complex inferred by using sequences of the mitochondrial gene cytochrome b, 463 bp. Numbers above nodes are posterior probability values above 95 %; numbers before species names are catalogue numbers for specimens.

opencc-by-4.0Aug 2018View details →
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Figure 5 from: Costa WJEM, Amorim PF, Mattos JLO (2018) Cryptic species diversity in the Hypsolebias magnificus complex, a clade of endangered seasonal killifishes from the São Francisco River basin, Brazilian Caatinga (Cyprinodontiformes, Aplocheilidae). ZooKeys 777: 141-158. https://doi.org/10.3897/zookeys.777.25058

Figure 5 Caudal fin of live males of the Hypsolebiasmagnificus species complex. AH.harmonicus, holotype, UFRJ 6696, 29.4 mm SLBH.gardneri sp. n., paratype, UFRJ 6797, 34.4 mm SLCH.hamadryades Costa sp. n., paratype, UFRJ 6895, 24.8 mm SLDH.magnificus, specimen from Gado Bravo, UFRJ 4959, 31.2 mm SLEH.magnificus, topotype not preserved, about 25 mm SLFH.picturatus. Paratype, UFRJ 5053, 38.6 mm SL. Photographs by WJEM Costa.

opencc-by-4.0Aug 2018View details →
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Figure 5 from: Liu D, Zhou Y, Yang K, Zhang X, Chen Y, Li C, Li H, Song Z (2018) Low genetic diversity in broodstocks of endangered Chinese sucker, Myxocyprinus asiaticus: implications for artificial propagation and conservation. ZooKeys 792: 117-132. https://doi.org/10.3897/zookeys.792.23785

Figure 5 Neighbor-joining trees of individuals in three Myxocyprinusasiaticus broodstocks based on mtDNA control region.

opencc-by-4.0Oct 2018View details →

ScienceDex guides

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Allen Brain Atlas

Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.

allen-brain-atlas
neuroscienceopenDocumentation, web resources, and API references are available online.
Last verified 2026-04-30Open record

Annotated Behaviour and Observability Dataset (ABODe)

ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.

abode-home-cage
behavioral-neuroscienceopenThe DataShare record exposes download links for annotations, documentation, license text, and the zipped per-snippet data directory.
Last verified 2026-04-30Open record

DANDI Archive for NWB datasets

DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.

dandi-nwb
electrophysiologyopenPublished Dandiset metadata and archive endpoints are available through the production DANDI API.
Last verified 2026-04-30Open record

International Brain Laboratory public data

The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.

ibl
behavioral-neuroscienceopenPublic sessions can be searched and loaded from the IBL public data server through ONE.
Last verified 2026-04-29Open record

OpenNeuro

OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.

openneuro
neuroscienceopenPublished datasets are available on demand over the internet.
Last verified 2026-04-29Open record

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