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Variational Interaction Information Maximization for Cross-domain Disentanglement
<p>Cars dataset, VGG features of Sketchy dataset, and pretrained model parameters for all datasets covered in the paper.</p>
NPM Package Information from Libraries.io
<p>This zip file contains a JSON file of package and repository information for 12 million NPM packages, sourced from libaries.io (10.5281/zenodo.3626071, https://libraries.io/data, January 12, 2020). The file is 2.39GB uncompressed.</p> <p>The file was generated from the 'Projects with related Repository fields' csv file, filtering for NPM packages only. The original files contains inconsistent columns between the first row, containing labels, and the subsequent rows, containing data, however the additional, unlabelled column is empty for all NPM packages so it has been ignored, and the subsequent rows shifted up into their correct positions.</p> <p>This dataset has not modified otherwise.</p> <p>Includes data from Libraries.io.</p>
Information transfer efficiency differs in wild chimpanzees and bonobos, but not social-cognition
Several theories have been generated to understand the socio-cognitive mechanisms underlying the unique cooperative abilities of humans. The "interdependence hypothesis" posits that the cognitive dimension of human cooperation evolved in contexts when several individuals needed to collaborate to achieve a common goal and that more interdependent individuals are more likely to cooperate (provide services to conspecifics) in non-collaborative contexts. Alternatively, the "social tolerance hypothesis" proposes that higher social tolerance allows conspecifics to cooperate more efficiently and with a wider range of partners. We conducted the first field experimental evaluation of both hypotheses in our closest living relatives by contrasting chimpanzees to the less interdependent but more tolerant bonobos. We compared each species' performance during a non-collaborative cooperative task: informing conspecifics about a danger. We presented Gaboon viper models to 82 individuals from 5 wild communities. Chimpanzees arriving late at the snake were significantly more likely to have heard a call and less likely to startle, indicating that chimpanzees were better informed about the presence of the threat than bonobos. This stems from clear species differences in how individuals adjusted their calling decisions to the level of information already available. Chimpanzees were more likely to call and produced more alarm calls when they had not yet heard a call, whereas bonobos did so when they already heard a call. Our results confirm the link between interdependence and cooperation performance. These species differences were most likely driven by differences in motivation rather than in cognitive capacities since both species tended to consider audience knowledge in their decision to call. Our results inform theories on the evolution of human cooperation by linking inter-group competition pressure and in-group cooperative motivation and/or capability.
FIGURE 17 in Two new species of the whip-spider genus Heterophrynus (Arachnida: Amblypygi) with complementary information of four species
FIGURE 17. Heterophrynus origamii sp. nov. Female (MZUSP 68451): A. Carapace. B. Sternum. C. Dorsal opisthosoma. D. Chelicera, mesal view. E. Trochanter (Tr). F. Chelicera, ectal view.
FIGURE 16 in Two new species of the whip-spider genus Heterophrynus (Arachnida: Amblypygi) with complementary information of four species
FIGURE 16. Male genital: Heterophrynus awa sp. nov. (ICN-Am-108): A. ventral view. B. Detail of ornamentation of LoL 1 and LoL 2. C. Dorsal view. Fi = fistula; LaM = lamina medialis; LoD = lobus dorsalis; LoL 1= lobus lateralis primus; LoL 2 = lobus lateralis secundus; Pi = processus internus of gonopod. D. Female genital (ICN-Am-75), black arrow indicates the sclerotized area of the seminal receptacle.
FIGURE 1 in Two new species of the whip-spider genus Heterophrynus (Arachnida: Amblypygi) with complementary information of four species
FIGURE 1. Heterophrynus alces. Female (MZUSP 74499): A. Carapace. B. Sternum. C. Dorsal opisthosoma. D. Chelicera, mesal view. E. Trochanter (Tr). F. Chelicera, ectal view.
FIGURE 5 in Two new species of the whip-spider genus Heterophrynus (Arachnida: Amblypygi) with complementary information of four species
FIGURE 5. Heterophrynus armiger. Male (IAvH-I 2924): A. Ventral femur (Fv). B. Dorsal femur (Fd). C. Ventral patella (Pv). D. Dorsal patella (Pd). E. Ventral tibia (Tv). F. Dorsal tibia (Td).
FIGURE 9 in Two new species of the whip-spider genus Heterophrynus (Arachnida: Amblypygi) with complementary information of four species
FIGURE 9. Heterophrynus cheiracanthus. Female (MZUSP 9459): A. Ventral femur (Fv). B. Dorsal femur (Fd). C. Ventral patella (Pv). D. Dorsal patella (Pd). E. Ventral tibia (Tv). F. Dorsal tibia (Td).
FIGURE 11 in Two new species of the whip-spider genus Heterophrynus (Arachnida: Amblypygi) with complementary information of four species
FIGURE 11. Heterophrynus elaphus. Female (MZUSP 74571): A. Carapace. B. Sternum. C. Dorsal opisthosoma. D. Chelicera, mesal view. E. Trochanter (Tr). F. Chelicera, ectal view.
FIGURE 13 in Two new species of the whip-spider genus Heterophrynus (Arachnida: Amblypygi) with complementary information of four species
FIGURE 13. Male genital: Heterophrynus elaphus. (MZUSP 74571): A. ventral view. B. Detail of ornamentation of LoL 1 and LoL 2. C. Dorsal view. Fi = fistula; LaM = lamina medialis; LoD = lobus dorsalis; LoL 1= lobus lateralis primus; LoL 2 = lobus lateralis secundus; Pi = processus internus of gonopod. D. Female genital (MZUSP 74571), white arrow indicates the sclerotized area of the seminal receptacle,), black arrow indicates an extra sclerite at the base of gonopod.
FIGURE 8 in Two new species of the whip-spider genus Heterophrynus (Arachnida: Amblypygi) with complementary information of four species
FIGURE 8. Heterophrynus cheiracanthus. Female (MZUSP 9459): A. Carapace. B. Sternum. C. Dorsal opisthosoma. D. Chelicera, mesal view. E. Trochanter (Tr). F. Chelicera, ectal view.
FIGURE 7 in Two new species of the whip-spider genus Heterophrynus (Arachnida: Amblypygi) with complementary information of four species
FIGURE 7. Male genital: Heterophrynus armiger. (IAvH-I 2924): A. Spine over LoL1, dorsal view. B. Detail of spine, ventral view.
NPM Code Snippets and Package Information
<p>Contains two JSON files, snippets and package info.</p> <p>The snippets file contains code snippets extracted from npm package readme files, as well as descriptions. The code snippets were extracted by looking for markdown code fences. For code highlighting, some fences contain language information - all non-js code snippets were excluded. Code snippets that only contained a javascript object were also excluded, as these were often snippets showing the results of some functionality, or settings.</p> <p>Descriptions were extracted, in summary, by looking for code above the snippet.</p> <p>Package info comes from Libraries.io, containing only packages that have code snippets. This includes repository information like number of forks, stars, etc.</p> <p>The original npm readme files dataset and npm package info datasets are also available for download:</p> <pre>https://doi.org/10.5281/zenodo.3898749 https://doi.org/10.5281/zenodo.3836540 </pre>
Information and influence operations in the cyberspace
<p>What are the main security threats affecting European liberal democracies in the digital era? Two graphics that show the current perceptions of threats (number of EU countries) and Perceptions of vulnerability and resilience against security threats (number of EU countries).</p> <p>video : https://www.youtube.com/watch?v=O8xGg-0ef2U&feature=youtu.be </p>
Covert information warfare – busted!
<p>Propaganda represents the intensive manipulation of information so as to influence perceptions and the ability of the target audience to make objective decisions. Disinformation refers to an entire array of tactics and strategies used to propagate false, inexact or out of context information.</p> <p>OER available at: <a href="https://www.youtube.com/watch?v=7UaJfWzfq8M&feature=youtu.be">https://www.youtube.com/watch?v=7UaJfWzfq8M&feature=youtu.be</a> </p>
Experts views on information evaluation and verification: source reliability, content credibility and audiovisual material checking
<p>Experts can be asked about nformation evaluation and verification: source reliability, content credibility and audiovisual material checking.</p> <p>OER available at: <a href="https://multimedia.ciberimaginario.es/genially/2020/CRESCEnt/4.2.1/">https://multimedia.ciberimaginario.es/genially/2020/CRESCEnt/4.2.1/</a> </p>
Overcoming information reduced data and experimentally uncertain parameters in ptychography with regularized optimization
<p>These are the datasets used for the publication <a href="https://arxiv.org/abs/2005.01530">https://arxiv.org/abs/2005.01530</a>. The bin files are the actual data, and the other files are the configuration files used to generate the datasets.</p> <p>In more detail, the Forward_Params*.cnf files were used in combination with FDES (<a href="https://doi.org/10.1016/j.ultramic.2015.07.005">https://doi.org/10.1016/j.ultramic.2015.07.005</a>) to generate diffraction patterns.</p> <p>The Reconstruction_Params*.cnf files were used with the code outlined in the main publication to generate the simulated results.</p> <p>The Simulation*.bin files are the raw simulated CBEDs, stored in a binary format. The eCount portion of the filename corresponds to the Poissonian statistics applied to simulate real data. The ground truth file is upsampled, with larger diffraction pattern sizes, while the eCountInf has infinite dose, and therefore no noise.</p> <p>If you want more information, please contact the corresponding author of the publication, at vandenbroek@physik.hu-berlin.de. </p>
List of tissue specimens of Hipposideros spp. used for cytochrome b sequencing and phylogenetic inference, with geographical data. Voucher refers to the location and/or accession number of the voucher, and tissue collection refers to the collection where the tissue is kept, and accession or collector numbers. Acronyms are as follows: Estación Biológica de DoZana, Sevilla, Spain (EBD), South Australia Museum, Adelaide, Australia (SAM), Senckenberg Museum, Frankfurt am Main, Germany (SMF), Instituto de Ecología, Xalapa, México (IEX), Louisiana State University, Baton Rouge, Louisiana, USA (LSU), Charles M. Francis, Canadian Wildlife Service, Ottawa, Ontario, Canada (CMF), Lao Department of Forestry, Vientiane, Lao PDR, no catalogued (LAO). Next column indicates GenBank accession numbers. More information about the specimens is available in the GenBank records in A new species of bat of the Hipposideros bicolor group (Chiroptera: Hipposideridae) from Central Laos, with evidence of convergent evolution with Sundaic taxa
List of tissue specimens of Hipposideros spp. used for cytochrome b sequencing and phylogenetic inference, with geographical data. Voucher refers to the location and/or accession number of the voucher, and tissue collection refers to the collection where the tissue is kept, and accession or collector numbers. Acronyms are as follows: Estación Biológica de DoZana, Sevilla, Spain (EBD), South Australia Museum, Adelaide, Australia (SAM), Senckenberg Museum, Frankfurt am Main, Germany (SMF), Instituto de Ecología, Xalapa, México (IEX), Louisiana State University, Baton Rouge, Louisiana, USA (LSU), Charles M. Francis, Canadian Wildlife Service, Ottawa, Ontario, Canada (CMF), Lao Department of Forestry, Vientiane, Lao PDR, no catalogued (LAO). Next column indicates GenBank accession numbers. More information about the specimens is available in the GenBank records
The elevated mist-net frame - Supporting Information: Appendices S1-S4
<p><b>Summary<b> </b></b></p> <ol> <li><span><span><span>Classic standard mist-netting limits sampling to understory birds flying <3 m above ground-level. Methodological innovations targeting higher strata birds (and bats) are important for ecological studies, particularly in tropical forests.</span></span></span></li> <li><span><span><span>I present and evaluate a method of applying elevated mist-net frames (EMF) up to ~25-30 m. I designed detachable mobile alloy frames for standard-sized 3×6 m mist-nets, weighing ~11 kg including fittings, and suspended by 3-point cable-wire mounting. State-of-the-art archery and fishing gear are employed for securing anchor-lines, with hoisting applied by pulley, ropes and guys. </span></span></span></li> <li><span><span><span>EMF is assembled and detached by 2-3 team members within 15-20 minutes, and up-down hoisting lasts 1-3 minutes. EMF excludes tree-climbing and arboreal platforms, through versatile manoeuvring in lightly-cluttered naturally open corridors. EMF costs are source and quantity dependent, and feasible to institutions and grant beneficiaries. </span></span></span></li> <li><span><span><span>EMF is a workable alternative or supplement to existing elevated mist-netting applying poles, ropes and pulleys, owing to strength and durability, replicable construction, and versatile manoeuvrability in upper strata. The EMF-design demonstrates favourable prospects for high-tech development, thus further innovations are recommended. </span></span></span></li> </ol>
Modern pollen–plant diversity relationships inform palaeoecological reconstructions of functional and phylogenetic diversity in calcareous fens
<p>Predicting the trajectory of ongoing diversity loss requires knowledge of historical development of community assemblages. Long-term data from paleoecological investigations combined with key biodiversity measures in ecology such as taxonomic richness, functional diversity (FD), phylogenetic diversity (PD) and environmental factors expressed as Ellenberg indicator values (EIVs) could provide that knowledge. We explored the modern pollen–plant (moss polster pollen vs. surrounding vegetation) diversity relationships for herbaceous and woody taxa in calcareous fens from two different regions in Estonia, NE Europe. Associations of taxonomic richness, vegetation composition, FD (including functional alpha diversity and trait composition), PD and EIVs in modern pollen vs. plant data were studied with correlation analysis, Procrustes analysis and linear regression models. To test their potential use in palaeoreconstructions, diversity measures were applied on pollen data from Kanna spring fen reflecting fen vegetation development over the last nine millennia and diversity changes through time were studied using generalized additive models. Results showed significant pollen–plant richness correlations for herbaceous taxa at vegetation estimate scales up to 6 m radius and Procrustes analysis showed significant compositional associations at all plant estimate scales (up to 100 m). Woody taxa had no significant pollen–plant richness correlations but composition relationships were significant at plant estimate scales of 6–100 m. Traits that were best reflected by pollen data (both in terms of trait composition and functional alpha diversity) among woody and herbaceous taxa were seed number, clonality, SLA and LDMC. PD of herbaceous species was reflected by pollen data. Among the EIVs, Ellenberg L and T were significantly reflected by pollen data for both woody and herbaceous communities. Palaeoreconstruction from Kanna fen indicates that trends of woody taxa are mostly related to long-term changes in climate while diversity variables of herbaceous taxa closely follow autogenic processes within the fen. We suggest that pollen-based diversity estimates should be calculated separately for woody and herbaceous taxa as they clearly represent different spatial scales. Present study suggests that linking sedimentary pollen data with FD, PD and EIVs provides possibilities to examine long-term trends in community assembly and ecosystem processes that would be undetectable from traditional pollen diagrams.</p>
ScienceDex guides
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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.