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486
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Dataset results
486 results for “RIP”
Convergence of distinct RNA-silencing pathways on GW182/Tnrc6 [RIP-seq]
GEO Series GSE205966. Mus musculus. 42 samples. Type: Other.
CUGBP1 RNA immunoprecipitation and sequencing (RIP-seq) in SK-Mel-103 and UACC-62 melanoma cell lines
GEO Series GSE83231. Homo sapiens. 6 samples. Type: Other.
Refined RIP-seq protocol for epitranscriptome analysis with low input materials
GEO Series GSE116002. Homo sapiens. 15 samples. Type: Other.
Identification of the RNAs that bind with MDM2 by high-throughput RIP-seq in MDA-MB-231 and MCF-7 cells
GEO Series GSE226511. Homo sapiens. 6 samples. Type: Other.
RIP-seq from K562 (ENCSR192OSC)
GEO Series GSE284845. Homo sapiens. 3 samples. Type: Other.
A monoclonal antibody raised against human EZH2 cross-reacts with the RNA-binding protein SAFB [RIP-seq]
GEO Series GSE227892. Mus musculus. 7 samples. Type: Expression profiling by high throughput sequencing.
The fission yeast MTREC complex targets CUTs and unspliced mRNAs to the nuclear exosome [RIP-ChIP]
GEO Series GSE64980. Schizosaccharomyces pombe. 6 samples. Type: Expression profiling by array.
Ago2-RIP-chip in Dicer WT and KO macrophages
GEO Series GSE87717. Mus musculus. 6 samples. Type: Other.
Decoding the m6A expression profiling of spinal cord after spared nerve injury at three time points with RIP-Seq
GEO Series GSE202166. Mus musculus. 24 samples. Type: Methylation profiling by high throughput sequencing; Expression profiling by high throughput sequencing.
NGS-based miRNome reveals regulation in the miR-34/miR-449 cluster targetome in sinonasal cancers [RIP-seq]
GEO Series GSE192594. Homo sapiens. 27 samples. Type: Other.
Function of ARGONAUTE proteins in the Arabidopsis shoot apical meristem (SAM) [RIP-seq]
GEO Series GSE192607. Arabidopsis thaliana. 16 samples. Type: Other.
Control of human hemoglobin switching by LIN28B-mediated regulation of BCL11A translation [RIP-Seq]
GEO Series GSE118357. Homo sapiens. 4 samples. Type: Other.
m6A-RIP-seq of mRNA in HeLa cells undergoing EMT
GEO Series GSE112795. Homo sapiens. 8 samples. Type: Expression profiling by high throughput sequencing; Other.
Phosphorylated UPF1 (p-UPF1) RIP-seq using mouse Neuro-2A (N2A) neuroblastoma cells
GEO Series GSE180134. Mus musculus. 9 samples. Type: Expression profiling by high throughput sequencing.
MicroRNA-dependent transposable element transcriptional silencing in Drosophila somatic ovarian cells [RIP-Seq]
GEO Series GSE60973. Drosophila melanogaster. 6 samples. Type: Other.
Dataset supporting "High-energy surf zone currents and headland rips at a geologically-constrained mesotidal beach", by Mouragues et al., submitted to JGR-Oceans
<p>This dataset comprises three Matlab structure containing drifter raw measurements during the four days of deployment (JGR_Drifters.mat), 5-min time-averaged and depth-averaged of velocity measured by the four ADCPs during the whole field experiment (JGR_Velocities_ADCP.mat) and the offshore wave conditions measured by the wave buoy (JGR_Waves_Offshore.mat).</p>
Transient rip currents on an alongshore variable bathymetry
<p>These codes and associated post-processed datasets can be used to plot all figures in the paper "Simulations of the surf zone eddy field and cross-shore exchange on a non-idealized bathymetry". </p>
COAWST model simulations of warm and cool nearshore rip-current plumes
<p>This archive contains COAWST model input, grids and initial conditions, and output used to produce the results in a submitted manuscript. The files are:</p> <p>model_input.zip: input files for simulations presented in this paper<br> ocean_rip_current.in: ROMS ocean model input file<br> swan_rip_current.in: SWAN wave model input file (example with Hs=1m)<br> coupling_rip_current.in: model coupling file<br> rip_current.h: model header file<br> <br> model_grids_forcing.zip: bathymetry and initial condition files<br> hbeach_grid_isbathy_2m.nc: ROMS bathymetry input file<br> hbeach_grid_isbathy_2m.bot: SWAN bathymetry input file<br> hbeach_grid_isbathy_2m.grd: SWAN grid input file<br> hbeach_init_isbathy_14_18_17.nc: Initial temperature, cool surf zone dT=-1C case<br> hbeach_init_isbathy_14_18_19.nc: Initial temperature, warm surf zone dT=+1C case<br> hbeach_init_isbathy_14_18_16.nc: Initial temperature, cool surf zone dT=-2C case<br> hbeach_init_isbathy_14_18_20.nc: Initial temperature, warm surf zone dT=+2C case<br> hbeach_init_isbathy_14_18_17p5.nc: Initial temperature, cool surf zone dT=-0.5C case<br> hbeach_init_isbathy_14_18_18p5.nc: Initial temperature, warm surf zone dT=+0.5C case</p> <p>model_output files: model output used to produce the figures<br> netcdf files, zipped<br> variables included:<br> x_rho (cross-shore coordinate, m)<br> y_rho (alongshore coordinate, m)<br> z_rho (vertical coordinate, m)<br> ocean_time (time since initialization, s, output every 5 mins)<br> h (bathymetry, m)<br> temp (temperature, Celsius)<br> dye_02 (surfzone-released dye)<br> Hwave (wave height, m)<br> Dissip_break (wave dissipation W/m2) <br> ubar (cross-shore depth-average velocity, m/s, interpolated to rho-points)<br> Case_141817.nc: cool surf zone dT=-1C Hs=1m<br> Case_141819.nc: warm surf zone dT=+1C Hs=1m<br> Case_141816.nc: cool surf zone dT=-2C Hs=1m<br> Case_141820.nc: warm surf zone dT=-2C Hs=1m<br> Case_141817p5.nc: cool surf zone dT=-0.5C Hs=1m<br> Case_141818p5.nc: warm surf zone dT=+0.5C Hs=1m<br> Case_141817_Hp5.nc: cool surf zone dT=-1C Hs=0.5m<br> Case_141819_Hp5.nc: warm surf zone dT=+1C Hs=0.5m<br> Case_141817_Hp75.nc: cool surf zone dT=-1C Hs=0.75m<br> Case_141819_Hp75.nc: warm surf zone dT=+1C Hs=0.75m</p> <p>COAWST is an open source code and can be download at https://coawstmodel-trac.sourcerepo.com/coawstmodel_COAWST/. Descriptions of the input and output files can be found in the manual distributed with the model code and in the glossary at the end of the ocean.in file.</p> <p>Corresponding author: Melissa Moulton, mmoulton@uw.edu</p>
Proline exacerbates hepatic gluconeogenesis via paraspeckle-dependent mRNA retention [RIP-Seq]
GEO Series GSE252450. Mus musculus. 4 samples. Type: Other.
Lin28b augments protein synthesis to control B cell positive selection early in life [RIP-seq]
GEO Series GSE217787. Mus musculus. 6 samples. Type: Other.
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.