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Figure 3 in Middle Miocene origins for tough-browse dietary specialisations in the koala (Marsupialia, Phascolarctidae) evolutionary tree: description of a new genus and species from the Riversleigh World Heritage Area
Figure 3. The evolution of primary M1 trigonid cuspids (metaconid, protoconid and protostylid) in phascolarctids. A, Schematic diagram of a phascolarctid right M 1 illustrating how dimensions and percentages represented in Table 1 were obtained (adapted from Black et al., 2014a); B, Graphical representation of the relative positions and distance between the primary M 1 trigonid cuspids as a percentage of trigonid width; C, phylogenetic relationships of phascolarctids (from Black et al., 2012a). Abbreviations: end, entoconid; hyd, hypoconid; med, metaconid, prd, protoconid; psd, protostylid. Data for Madakoala, Perikoala, Litokoala, Nimiokoala and Phascolarctos, is based on M. devisi, Pe. robustus, L. kutjamarpensis, N. greystanesi and P. cinereus, respectively, with mean values used for the latter two species (Table 1).
APPENDIX 4. — Ultrametric Bayesian tree reconstructed with the 5P in Molecular data reveal the presence of three Plocamium Lamouroux species with complex patterns of distribution in Southern Chile
APPENDIX 4. — Ultrametric Bayesian tree reconstructed with the 5P-COI marker. The dotted vertical red line indicates the maximum likelihood transition point of the switch in branching rates, as estimated by a General Mixed Yule-Coalescent (GMYC) model. The GMYC analysis was performed using a single threshold. Haplotype code as in Appendix 5.
FIG. 2 in Epiphytic bryophytes on alien host-tree species in Wrocław (SW Poland)
FIG. 2. — Comparison of the percentage of incidence of individual bryophyte species on trunks of alien host trees situated in complexes of urban greenery and urban buildings. Key: Species for which statistical significance (p<0.05) was found in preferences to occur more frequently in one of the land-use complexes are marked with an asterisk. Tests were not performed in cases in which one of the components (population in greenery or built-up space) was equal to zero.
FIG. 4 in Epiphytic bryophytes on alien host-tree species in Wrocław (SW Poland)
FIG. 4. — UPGMA phenogramme of the bryofloristic similarity of the phorophytes based on the species total coverage in the plots on the individual tree species. Key: I, II, IIa… groups and subgroups of the bryofloristic similarity; dashed lines show borders among the latter; alien tree species were marked in bold.
FIG. 3 in Epiphytic bryophytes on alien host-tree species in Wrocław (SW Poland)
FIG. 3. — Comparison of the percentage of incidence of the individual bryophyte species on trunks of alien host trees situated in the inner vs. outer city. Key: symbols as in Fig. 2. Tests were not performed in cases in which one of the components (population in inner or outer city) was equal to zero.
FIG. 1 in Epiphytic bryophytes on alien host-tree species in Wrocław (SW Poland)
FIG. 1. — Location of the plots in relation to the spatial structure of Wrocław (based on Urban Atlas 2012, Copernicus Land Monitoring System). Legend: 1, Continuous urban fabric (sealing level> 80%); 2, Discontinuous dense urban fabric (S.L.: 50%-80%); 3, Discontinuous medium and low urban fabric (S.L.: 10%-50%); 4, Industrial and commercial areas; 5, Transport and communication areas; 6, Forests; 7, Green urban areas; 8, Sports and leisure facilities; 9, Agricultural and semi-natural areas; 10, Water bodies; 11, Field measurements; 12, City inner zone (description in text).
figure 2 The dated phylogenetic trees using the cytb gene for G. subgutturosa. Blue bars show 95 in Unraveling goitered gazelle (Gazella subgutturosa) diversification: insights from phylogeography and species distribution modeling
figure 2 The dated phylogenetic trees using the cytb gene for G. subgutturosa. Blue bars show 95% highest posterior density intervals of the estimated node ages; numbers next to the nodes are mean node ages (Mya). The red and green lines show new haplotypes from this study.
Figure 5. Bayesian Inference tree calculated with complete cox1 in Novel phylogenetic clade of avian Haemoproteus parasites (Haemosporida, Haemoproteidae) from Accipitridae raptors, with description of a new Haemoproteus species
Figure 5. Bayesian Inference tree calculated with complete cox1 (1428 bp), cox3 (753 bp), and cytb (1127 bp) sequences of haemosporidian parasites and Klossiella equi (MH203050) and Klossia razorbacki (MT084562) as the outgroup. Bayesian posterior probabilities and Maximum Likelihood bootstrap values are indicated at most nodes. The scale bar indicates the expected number of substitutions per site according to the model of sequence evolution applied.
Figure 3. Phylogenetic tree inferred from cytochrome B in Phlebotomus (Paraphlebotomus) chabaudi and Phlebotomus riouxi: closely related species or synonyms?
Figure 3. Phylogenetic tree inferred from cytochrome B data of Phlebotomus chabaudi and Ph. riouxi specimens. We added to the analysis the sequences of Ph. chabaudi published by Tabbabi et al. (2014). The phylogram results from bootstrapped data sets obtained using the PhyML 3.0 program [21] using GTR (general time reversible) + G distribution (gamma distribution of rates with four rate categories). The tree was visualized using the TreeDyn program, version 198.3 [7]. The percentages above the branches are the frequencies with which a given branch appeared in 500 bootstrap replications. Only bootstrap values higher than 50% on the early branches are shown. A sequence of Ph. sergenti (AF161216) was used as the outgroup. The sequences marked by * were published by Tabbabi et al. (2014); R = sequences found in specimens morphologically characterized as Ph. riouxi. C = sequences found in specimens morphologically characterized as Ph. chabaudi. RC = sequences found in specimens morphologically characterized as Ph. chabaudi or Ph. riouxi. Int = sequences found in specimens morphologically characterized as intermediate between Ph. riouxi and Ph. chabaudi.
Fig. 2. – Fagraea christinae Y.W. Low & V.A. Albert. A in Taxonomic appraisal of Fagraea ceilanica (Gentianaceae), and description of a new tree species from the Bird's Head Peninsula, western New Guinea
Fig. 2. – Fagraea christinae Y.W. Low & V.A. Albert. A. Habit of a flowering and fruiting branch; B. Close-up of calyx lobes outer surface showing warty or verrucose texture; C. Half of a longitudinal section of an open flower; note the stamens are inserted upon a thickened wall (forming a thickened ring in complete flower).
Fig. 1. – Fagraea ceilanica Thunb. A in Taxonomic appraisal of Fagraea ceilanica (Gentianaceae), and description of a new tree species from the Bird's Head Peninsula, western New Guinea
Fig. 1. – Fagraea ceilanica Thunb. A. Reproduction of the illustration, tab. IV (THUNBERG, 1782); B. Lectotype (Thunberg s.n. [UPS-THUNB4308]); C. Flowering plant from Rahathangala, Sri Lanka.
Fig. 8. – Dalbergia sambavensis N in Taxonomic studies on Malagasy Dalbergia (Fabaceae). V. Eight new large tree species and notes on related Malagasy species
Fig. 8. – Dalbergia sambavensis N. Wilding, Phillipson & Crameri. A. Flowering branch; B, C. Portions of leaf rachis with leaflets (b: lower surface; c: upper surface); D. Inflorescence branch; E. Flower; F. Calyx (outer surface, split open and flattened); G. Standard petal (adaxial surface); H. Wing petal (adaxial surface); I. Keel petal (adaxial surface); J. Androecium (adaxial surface, flattened); K. Gynoecium.
Fig. 5. – Dalbergia oronjiae N in Taxonomic studies on Malagasy Dalbergia (Fabaceae). V. Eight new large tree species and notes on related Malagasy species
Fig. 5. – Dalbergia oronjiae N. Wilding, Phillipson & Crameri. A. Flowering branch; B. Portion of leaf rachis with leaflets (lower surface); C. Fruiting branch; D. Mature fruit; E. Calyx (outer surface, split open and flattened); F. Standard petal (adaxial surface);
Fig. 2. – Dalbergia bosseri N in Taxonomic studies on Malagasy Dalbergia (Fabaceae). V. Eight new large tree species and notes on related Malagasy species
Fig. 2. – Dalbergia bosseri N. Wilding, Phillipson & Crameri. A. Fruiting branch; B, C. Portions of leaf rachis with leaflets (b: dried leaf, upper surface, the upper leaflet turned to show its lower surface; c: living leaf, lower surface, the upper leaflet turned to show its upper surface); D. Immature fruit. [Hassold et al. 711, P] [Drawings: R.L. Andriamiarisoa]
Fig. 1 in Taxonomic studies on Malagasy Dalbergia (Fabaceae). V. Eight new large tree species and notes on related Malagasy species
Fig. 1. – Approximate distribution ranges of the eight new large tree species of Malagasy Dalbergia, covering all known extant and historic collections of these species. Black borders represent regions of Madagascar, and are labeled where relevant. Elevation classes are indicated as shades of grey. A. Three new species restricted to the northern part of Madagascar; B. Three new species with disjunct distributions in northern and/or western Madagascar, and two new species with restricted distribution ranges in eastern Madagascar. The range of D. monticola Bosser & R. Rabev. was added to emphasize that it is not known to co-occur with the similar and closely related species D. sambavensis N. Wilding, Phillipson & Crameri and D. soafarae N. Wilding, Phillipson & Crameri.
Fig. 9. – Dalbergia soafarae N in Taxonomic studies on Malagasy Dalbergia (Fabaceae). V. Eight new large tree species and notes on related Malagasy species
Fig. 9. – Dalbergia soafarae N. Wilding, Phillipson & Crameri. A. Fruiting branch; B, C. Leaflets (b: upper surface; c: lower surface); D. Flower; E. Immature fruit; F. Calyx (outer surface, split open and flattened); G. Standard petal (adaxial surface); H. Wing petal (adaxial surface); I. Keel petal (adaxial surface); J. Androecium (adaxial surface, flattened); K. Gynoecium.
Fig. 4. – Dalbergia leandrii N in Taxonomic studies on Malagasy Dalbergia (Fabaceae). V. Eight new large tree species and notes on related Malagasy species
Fig. 4. – Dalbergia leandrii N. Wilding, Phillipson & Crameri. A. Flowering branch; B, C. Leaflets (b: upper surface; c: lower surface); D. Mature fruit; E. Flower; F. Calyx (outer surface, split open and flattened); G. Standard petal (adaxial surface);
Fig. 7 in Taxonomic studies on Malagasy Dalbergia (Fabaceae). V. Eight new large tree species and notes on related Malagasy species
Fig. 7. – Dalbergia rakotovaoi Phillipson, N. Wilding & Crameri. A. Mature fruit; B. Fruiting branch; C. Leaflet upper surface; D. Leaflet lower surface; E. Inflorescence with immature fruits; F. Flower; G. Androecium (adaxial surface, flattened); H. Gynoecium; I. Standard petal (adaxial surface); J. Wing petal (adaxial surface); K. Keel petal (adaxial surface); L. Calyx (outer surface, split open and flattened).
Fig. 3. Majority with bootstrap support consensus trees for 12S in MITOCHONDRIAL 16S AND 12S rRNA SEQUENCE ANALYSIS IN FOUR SALMONID SPECIES FROM ROMANIA
Fig. 3. Majority with bootstrap support consensus trees for 12S rRNA. (a) 12S rRNA Maximum Parsimony tree; (b) 12S rRNA Neighbor Joining tree, distance model Kimura 2 Parameters, transi-
Fig. 2. Majority with bootstrap support consensus trees for 16S in MITOCHONDRIAL 16S AND 12S rRNA SEQUENCE ANALYSIS IN FOUR SALMONID SPECIES FROM ROMANIA
Fig. 2. Majority with bootstrap support consensus trees for 16S rRNA. (a) 16S rRNA Neighbor Joining tree, distance model Kimura 2 Parameters, transition/transversion ratio 2.3; (b) 16S rRNA Maximum Parsimony tree; (c) 16S rRNA Maximum Likelihood tree
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.