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666 results for “Translocation”
Figure 10 in Integrative taxonomy of Parasabella and Sabellomma (Sabellidae: Annelida) from Australia: description of new species, indication of cryptic diversity, and translocation of some species out of their natural distribution range
Figure 10. Parasabella bioculata sp. nov. colour micrographs. A–C, live specimen. A, radiolar crown and anterior thoracic chaetigers, lateral view. B, same, dorsal view. C, whole specimens with opened radiolar crown. D–I, preserved specimens. D, anterior thoracic chaetigers and base of radiolar crown, lateral view. E, same, ventrolateral view. F, specimen with detached crown, dorsal view. G, tip of lateral radioles showing the subdistal radiolar eyes. H, arrangement of radiolar eyes on lateral radiole. I, magnified detail showing cup-shaped radiolar eye. A–C, AM W.37053; D, E, G, H, AM W.46997; F, I, AM W.37056.
Figure 9 in Integrative taxonomy of Parasabella and Sabellomma (Sabellidae: Annelida) from Australia: description of new species, indication of cryptic diversity, and translocation of some species out of their natural distribution range
Figure 9. Parasabella sp. cf. Parasabella aulaconota scanning electron microscope photographs. A, anterior thoracic chaetigers and base of radiolar crown, ventral view, with ventral shields in contact with neuropodial tori. B, same, showing the collar, lateral view. C, collar dorsal margins, lateral view. D, anterior thoracic chaetigers and base of radiolar crown, showing collar dorsal margins, dorsal view. E, collar chaetae, elongate, narrowly hooded. F, thoracic elongate, narrowly hooded superior notochaetae and inferior, broadly hooded (type B) chaetae. G, detail of inferior thoracic chaetae. H, I, thoracic uncini from specimens collected in temperate and tropical sites, respectively. J, companion chaetae. K, complete row of uncini in abdominal notopodia, showing the range in size from dorsal- to ventral-most uncini. L, midabdominal narrowly hooded neurochaetae. M, abdominal uncini. B, C, F, H, K–M, AM W.22017; A, D, E, G, I, J, AM W.22480.
Figure 11 in Integrative taxonomy of Parasabella and Sabellomma (Sabellidae: Annelida) from Australia: description of new species, indication of cryptic diversity, and translocation of some species out of their natural distribution range
Figure 11. Parasabella bioculata sp. nov. scanning electron microscope photographs. A, anterior thoracic chaetigers and base of radiolar crown, ventral view, showing ventral shields separated from neuropodial tori. B, same, lateral view. C, same, dorsal view. D, inside of radiolar crown, frontal view, showing dorsal lips and long radiolar appendages. E, elongate, narrowly hooded collar chaetae. F, midthoracic chaetiger, elongate, narrowly hooded superior thoracic chaetae, and inferior, broadly hooded type B chaetae. G, thoracic uncini. H, companion chaetae. I, midabdominal, narrowly hooded neurochaetae. J, abdominal uncini. A–J, AM W.36449.
Figure 8 in Integrative taxonomy of Parasabella and Sabellomma (Sabellidae: Annelida) from Australia: description of new species, indication of cryptic diversity, and translocation of some species out of their natural distribution range
Figure 8. Parasabella sp. cf. Parasabella aulaconota colour micrographs. A, B, live specimen, anterior end, dorsal view. C–F, preserved specimen. C, detail of remaining pigmentation on radioles. D, anterior end showing collar margins, ventral lappets, ventral shields, and neuropodial tori. E, anterior end, lateral view. F, anterior end, dorsal view, showing dorsal collar margins. A, B, AM W.35612; C, AM W.47006; D–F, AM W.22480.
Figure 6. Parasabella aberrans spp. complex, colour micrographs. A in Integrative taxonomy of Parasabella and Sabellomma (Sabellidae: Annelida) from Australia: description of new species, indication of cryptic diversity, and translocation of some species out of their natural distribution range
Figure 6. Parasabella aberrans spp. complex, colour micrographs. A, crown and anterior thoracic segments, lateral view. B, thoracic chaetigers showing ventral shields in contact with neuropodial tori. C, anterior thoracic chaetigers and base of crown, showing collar ventral lappets and shape of ventral shields. D, anterior thoracic segments in dorsal view, showing the stiff fleshy swelling separated by the faecal groove. E, same. F, fleshy swelling continuous across dorsum. A, AM W.36946; B, D, AM W.36935; C, E, AM W.36430; F, AM W.32018.
Figure 7. Parasabella aberrans spp. complex, scanning electron microscope photographs. A in Integrative taxonomy of Parasabella and Sabellomma (Sabellidae: Annelida) from Australia: description of new species, indication of cryptic diversity, and translocation of some species out of their natural distribution range
Figure 7. Parasabella aberrans spp. complex, scanning electron microscope photographs. A, anterior thoracic chaetigers and base of radiolar crown, ventral view. B, same, showing collar, lateral view. C, collar dorsal margins, lateral view. D, collar dorsal margins and fleshy swelling divided in two by faecal groove, dorsal view. E, fleshy swelling continuous across dorsum. F, elongate, narrowly hooded collar chaetae. G, inferior thoracic notochaetae (broadly hooded, type B). H, thoracic uncini and companion chaetae. I, J, thoracic uncini from specimens with continuous and divided dorsal swellings, respectively. K, L, companion chaetae from specimens with continuous and divided dorsal swelling, respectively. M, midabdominal, narrowly hooded neurochaetae. N, abdominal uncini. O, posterior abdominal chaetigers and pygidium, ventral view. A, B, D, F, G, H, M, N, AM W.36935; C, E, J, L, O, AM W.32018; I, K, AM W.36430.
Figure 4 in Integrative taxonomy of Parasabella and Sabellomma (Sabellidae: Annelida) from Australia: description of new species, indication of cryptic diversity, and translocation of some species out of their natural distribution range
Figure 4. Cross-sections of radioles near the base showing the supporting cartilaginous vacuolated cells in the rachis (with grey nuclei), surrounded by an extracellular cartilaginous sheath (white) and covered by columnar epithelium (grey). Upper side of drawings are the outer margin of radioles; on the bottom incomplete pinnules are sketched with a blood vessel (black) in between. A, Parasabella aberrans spp. complex. B, Parasabella sp. cf. Parasabella aulaconota. C, Parasabella fullo. D, Parasabella bioculata sp. nov. E, Parasabella crassichaetae sp. nov. complex. F, Parasabella sp. cf. Parasabella japonica. G, Parasabella sp. cf. Parasabella rugosa. H, Sabellomma cupoculata sp. nov. A, AM W.36947; B, AMW.47009; C, ZMB 5731; D, AM W.46840; E, AM W.47181; F, AM W.36450; G, AM W.36431; H, AM W.47189.
Figure 1 in Integrative taxonomy of Parasabella and Sabellomma (Sabellidae: Annelida) from Australia: description of new species, indication of cryptic diversity, and translocation of some species out of their natural distribution range
Figure 1. Maps with collecting sites in Australia. A, Parasabella aberrans spp. complex, Parasabella sp. cf. Parasabella aulaconota, Parasabella bioculata sp. nov. B, Parasabella crassichaetae sp. nov. complex, Parasabella sp. cf. Parasabella japonica, Parasabella sp. cf. Parasabella rugosa, Sabellomma cupoculata sp. nov.
Figure 2 in Integrative taxonomy of Parasabella and Sabellomma (Sabellidae: Annelida) from Australia: description of new species, indication of cryptic diversity, and translocation of some species out of their natural distribution range
Figure 2. Comparison of chaetae from different Parasabella, Sabellomma, and Megalomma species. A–G, thoracic inferior chaetae. A, Parasabella crassichaetae sp. nov. complex, with type A chaetae (broad hoods and distal ends narrowing abruptly). B–F, type B chaetae (slender hoods and with a progressively tapering distal tip). B, Parasabella sp. cf. Parasabella aulaconota. C, Parasabella aberrans spp. complex. D, Parasabella bioculata sp. nov. E, Parasabella sp. cf. Parasabella japonica. F, Parasabella sp. cf. Parasabella rugosa, G, Sabellomma cupoculata sp. nov., with type A chaetae. H–M, companion chaetae. H, I, with hoods transversely flattened. H, Megalomma interrupta Capa & Murray, 2009. I, Megalomma phyllisae Capa & Murray, 2009. J, K, with hoods laterally compressed; J, Parasabella crassichaetae sp. nov. complex. K, Parasabella sp. cf. Parasabella rugosa. L, M, with hoods transversely flattened but with very thin, almost needle-like distal mucro. L, Sabellomma cupoculata sp. nov., companion chaeate, top view. M, S. cupoculata sp. nov., companion chaeate, side view.
Figure 3. Maximum likelihood topologies. A, cytochrome oxidase 1 fragments. B, internal transcribed spacer fragment. C, combined data set. Bootstrap supports over 75 in Integrative taxonomy of Parasabella and Sabellomma (Sabellidae: Annelida) from Australia: description of new species, indication of cryptic diversity, and translocation of some species out of their natural distribution range
Figure 3. Maximum likelihood topologies. A, cytochrome oxidase 1 fragments. B, internal transcribed spacer fragment. C, combined data set. Bootstrap supports over 75% shown on nodes. Scale bar, average of nucleotide substitutions per site.
A high-throughput skim-sequencing approach for genotyping, dosage estimation and identifying translocations
<p>An optimized, high-throughput and cost-effective genotyping method applicable to various crop breeding populations is very important in this genomic era. We have developed an optimized Nextera skim-sequencing (skim-seq) approach to genotype different populations that can be used for genetics studies and genomics-assisted breeding. We performed skim-seq on a variety of populations developed through doubled haploid (DH) technology, inter-specific recombinants developed through introgression, amphidiploid developed through wide crosses, and on known monosomic samples.</p> <p>1. A doubled haploid (DH) population consisting of 48 lines from the cross of spring wheat (<i>Triticum</i> <i>aestivum</i>) cultivars CDC Stanley and CDC Landmark developed by the Crop Development Centre at the University of Saskatchewan. We genotyped these DH with skim-seq and identified the genomic segments contributed by each of the two parental lines.</p> <p>2. A population of 335 back cross generation 1 (BC1) skim-seq samples for wheat-barley recombinants with group 7 translocations and 839 F1 wheat 5D monosomic lines (TA3059) along with 16 standard Chinese Spring lines as internal control.</p> <p>3. A panel of 144 <i>Thinopyrum</i> <i>intermedium</i> x <i>Triticum</i> <i>durum</i> (IWG--durum) lines and 141 <i>Thinopyrum</i> <i>intermedium</i> (IWG) lines were evaluated to assess skim-seq genome coverage as well as amphiploidy levels.</p> <p>The demultiplexed FASTQ files for all samples tested in the experiment are available at NCBI SRA public repository with respective BioProject accessions; DH lines [PRJNA729723], 5D monosomic line [PRJNA742385], wheat-barley recombinants [PRJNA738484], IWG-durum and IWG [PRJNA736976]. An example key file for the 5D monosomic line is also attached. </p> <p>This study indicated that skim-seq is an efficient approach for genomic evaluation of a range of different populations and applications. The scripts have been provided to implement skim-seq data for variant calling, identification of genomic segment dosage and alien introgression. Each step of the pipeline is described and implemented with similar sequencing data from skim-seq libraries.</p>
Figure 2 in Associated costs of mitigation-driven translocation in small lizards
Figure 2. Regression plots showing the relationship between the distance moved by the lizards and the change in (a) body condition, and (b) intensity of mite infestation between capture and recapture.
Figure 1 in Associated costs of mitigation-driven translocation in small lizards
Figure 1. Plots according to model averaging and crossvalidation (see table 1) showing the significant effect of the translocation experiment on (a) the distance moved (F1, 37 = 8.53, P = 0.006) and (b) the change in body condition (F1, 36 = 4.16, P = 0.048) of the males of Psammodromus algirus. Box shows mean ± SE and whisker confidence intervals (95%).
FIGURE 6 in Revision of the guttata-group of Alona s. lato leads to its translocation to Prendalona Sousa, Elmoor-Loureiro & Santos, 2018 (Cladocera: Anomopoda: Chydoridae)
FIGURE 6. Prendalona barbulata (Megard, 1967) from Salmon lake, Missoula county, Montana, USA, thoracic limbs. Female. A–B, inner and outer parts of limb I. C–D, inner and outer parts of limb II. E, exopodite of limb III. F–H, structures of inner portion of limb III. I, exopodite of limb IV. J, inner portion of limb IV. K, limb V. L, inner lobe of limb V. M, limb VI. Juvenile male of instar II. N, copulatory hook and IDL of limb I. O, endite 3 of limb I (setae a–b not shown). Adult male. P, copulatory hook and IDL of limb I. Q, endite 3 of limb I (setae a–b not shown).
FIGURE 2 in Revision of the guttata-group of Alona s. lato leads to its translocation to Prendalona Sousa, Elmoor-Loureiro & Santos, 2018 (Cladocera: Anomopoda: Chydoridae)
FIGURE 2. Prendalona barbulata (Megard, 1967) from Salmon lake, Missoula county, Montana, USA. Parthenogenetic female. A, lateral view. B–C, setae of anterior and posterior parts of ventral margin of valves. D, posteroventral angle of valves. E, head shield. F, head pores. G–H, labrum. I, antennule. J, antenna. Ephippial female. K, lateral view. Juvenile male of instar II. L, lateral view. M, antennule. Adult male. N, lateral view. O, labrum. P. antennule.
FIGURE 5 in Revision of the guttata-group of Alona s. lato leads to its translocation to Prendalona Sousa, Elmoor-Loureiro & Santos, 2018 (Cladocera: Anomopoda: Chydoridae)
FIGURE 5. Prendalona barbulata (Megard, 1967) from Salmon lake, Missoula county, Montana, USA. Parthenogenetic female. A, postabdomen. B–C, postanal margin of postabdomen. Juvenile male of instar II. D, postabdomen. Adult male. E–F, postabdomen.
FIGURE 9 in Revision of the guttata-group of Alona s. lato leads to its translocation to Prendalona Sousa, Elmoor-Loureiro & Santos, 2018 (Cladocera: Anomopoda: Chydoridae)
FIGURE 9. Prendalona guttata (Sars, 1862). Parthenogenetic female from Sagtjenn pond, Risør town, Agder county, Norway. A, antenna. Parthenogenetic female from Krugloe Lake, Chupa District, Republic of Karelia, Russia, B, head pores. C, postabdomen. D, antenna.
FIGURE 13 in Revision of the guttata-group of Alona s. lato leads to its translocation to Prendalona Sousa, Elmoor-Loureiro & Santos, 2018 (Cladocera: Anomopoda: Chydoridae)
FIGURE 13. Prendalona werestschagini (Sinev, 1999) Parthenogenetic female. A, lateral view. B, head shield. C, head pores. D, postabdomen. Ephippial female. E, lateral view. Adult male. F, lateral view. G, postabdomen. (after Sinev et al. 2021).
FIGURE 4 in Revision of the guttata-group of Alona s. lato leads to its translocation to Prendalona Sousa, Elmoor-Loureiro & Santos, 2018 (Cladocera: Anomopoda: Chydoridae)
FIGURE 4. Prendalona barbulata (Megard, 1967) from Salmon lake, Missoula county, Montana, USA. Ephippial female. A, labrum and thoracic limb I. B, posterior portion of labrum, covered by bacteria. C, head pores. D, postabdomen. E, antenna. Adult male. F, postabdomen.
FIGURE 8 in Revision of the guttata-group of Alona s. lato leads to its translocation to Prendalona Sousa, Elmoor-Loureiro & Santos, 2018 (Cladocera: Anomopoda: Chydoridae)
FIGURE 8. Prendalona guttata (Sars, 1862). Parthenogenetic female from from Sagtjenn pond, Risør town, Agder county, Norway. A–B, lateral view. C, frontolateral view. D, dorsolateral view. Parthenogenetic female from Krugloe Lake, Chupa District, Republic of Karelia, Russia, E–F, lateral view.
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.