Find research datasets worth reusing
Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.
264
datasets available to search
ShareScore release 0.9.0
Dataset results
264 results for “batch”
The effect of MEK inhibition on transcription in melanoma [Batch 2]
GEO Series GSE51113. Homo sapiens. 28 samples. Type: Expression profiling by array.
Digital transformation of herbal medicine: Conversion to biological entity data using digestive herbal medicine-induced transcriptome sequencing_second_HT29_batchE
GEO Series GSE250626. Homo sapiens. 30 samples. Type: Expression profiling by high throughput sequencing.
Single-cell RNA-seq of mouse embryos E6.5 and E7.5. Second batch.
GEO Series GSE133725. Mus musculus. 2213 samples. Type: Expression profiling by high throughput sequencing.
Annotation- and Batch Effect Correction in TCGA IsomiR Expression Data [Third-party re-analysis]
GEO Series GSE164767. Homo sapiens. 0 samples. Type: Other; Third-party reanalysis.
DNA Methylation-based Stratification of Pediatric Thyroid Carcinoma Invasiveness [1st batch]
GEO Series GSE296440. Homo sapiens. 102 samples. Type: Methylation profiling by genome tiling array.
Single cell RNAseq of Wild Type and IL27ra KO Tumor infiltrating lymphocytes isolated from B16F10 melanoma batch 3
GEO Series GSE113689. Mus musculus. 380 samples. Type: Expression profiling by high throughput sequencing.
Xenograft mouse model to investigate tropism to the CNS and retina in primary central nervous system lymphoma (first batch)
GEO Series GSE189822. Homo sapiens. 14 samples. Type: Expression profiling by high throughput sequencing.
Digital transformation of herbal medicine: Conversion to biological entity data using digestive herbal medicine-induced transcriptome sequencing_second_SW1783_batchE
GEO Series GSE254457. Homo sapiens. 30 samples. Type: Expression profiling by high throughput sequencing.
Endothelial cells in sepsis - batch 2
GEO Series GSE244943. Mus musculus. 12 samples. Type: Expression profiling by high throughput sequencing.
RNA-Seq profiling of day 7 and day 18 kidney organoids differentiated in two batches
GEO Series GSE99468. Homo sapiens. 10 samples. Type: Expression profiling by high throughput sequencing.
iSMNN: batch effect correction for single-cell RNA-seq data via iterative supervised mutual nearest neighbor refinement
GEO Series GSE161138. Mus musculus. 1 samples. Type: Expression profiling by high throughput sequencing.
Single cell RNAseq of Wild Type and IL27ra KO Tumor infiltrating lymphocytes isolated from B16F10 melanoma batch 5
GEO Series GSE113811. Mus musculus. 384 samples. Type: Expression profiling by high throughput sequencing.
Single-cell methylation and accessibility of mouse embryos E4.5 to E7.5. First batch.
GEO Series GSE121690. Mus musculus. 758 samples. Type: Methylation profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
Evolution of Barrett’s Esophagus through space and time at single-crypt and whole-biopsy levels [Batch 3 of 7]
GEO Series GSE99268. Homo sapiens. 96 samples. Type: Genome variation profiling by SNP array.
Alzheimer, MCI and control samples from AddneuroMed Cohort (batch 1)
GEO Series GSE63060. Homo sapiens. 329 samples. Type: Expression profiling by array.
Transcriptomic analysis of Clostridium acetobutylicum biofilm cells in repeated-batch fermentation
GEO Series GSE72765. Clostridium acetobutylicum DSM 1731; Clostridium acetobutylicum; Arthrobacter sp.. 8 samples. Type: Expression profiling by array.
Single-Cell RNA Sequencing of Batch Chlamydomonas Cultures Reveals their Heterogeneity and Place Along the Diurnal Cycle
GEO Series GSE157580. Chlamydomonas reinhardtii. 9 samples. Type: Expression profiling by high throughput sequencing.
Single Cell Transcriptome Analysis of Regenerating RGCs Reveals Potent Glaucoma Neural Repair Genes [Second_batch_reg_RGCs]
GEO Series GSE206624. Mus musculus. 383 samples. Type: Expression profiling by high throughput sequencing.
Automatic Jorek Calibration via Batch Bayesian Optimization Data
<p>The dataset contains the essential information for replicating the Plots in the paper 'Automatic Jorek Calibration via Batch Bayesian Optimization'. The reader can also find the complete list of JOREK simulations performed.</p>
Xenium human Brain Micrometastasis - 1rst batch
<p>This repository contains (1) all Xenium outputs as .zip files, (2) CD31 immunohistochemistry (IHC) staining in .czi format and the (3) .rds files related to 3 tissue sections from 2 human donors analysed by Xenium. Xenium and IHC were performed in sequential tissue sections from the same blocks. These datasets belong to a larger study to understand vascular co-option in brain micro-metastasis (Pedro García-Gómez et al., 2024). Please visit https://github.com/....... to obtain further information about the code and analysis pipeline used.</p> <p>This dataset is available through Zenodo for <strong>academic non-commercial use</strong> <strong>only</strong>. To request access, you must use your work/university email address and must submit the following details to <a href="mailto:ctc.peace@ucl.ac.uk">ctc.peace@ucl.ac.uk</a>:</p> <ul> <li> <ul> <li>Your Full Name, Role and Affiliated Institution</li> <li>An overview of your intended use of the dataset</li> <li>Acknowledgement of the restrictions for academic non-commercial use only</li> </ul> </li> </ul> <p>Access Request will be reviewed by the Data Access Committee (<a href="mailto:ctc.peace@ucl.ac.uk">ctc.peace@ucl.ac.uk</a>)</p> <p>The dataset can only be used by the applicants named on the application and for the intended use specified in the request. <strong>Copying or redistribution of this dataset is strictly prohibited.</strong></p>
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.