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Data for PSA 10.536 Elemental Hg generator performance evaluation report

During the SI-Hg performance evaluation of elemental mercury gas generators on the market three generators were tested, e.g., PSA 10.536 elemental Hg generator, bell-jar and Tekran Model 3425. Key characteristics were determined e.g.; the stabilisation period, short-term drift, precision, i.e., reproducibility and repeatability of the concentration generated, linearity, bias, sensitivity to sample gas pressure, sensitivity to surrounding temperature and sensitivity to electrical voltage. All three generators could be tested according to the calibration protocol developed within the project. The results obtained with the different gas generator clearly shows the importance of a metrological calibration. All three candidate generators show a different bias for the setpoint compared to the calibrated output. The data obtained during the performance evaluation of the PSA 10.536 elemental Hg generator is published in this repository. The files of the following experiments can be found here:<ul><li>range1 m1<ul><li>Calibration_PSA_range1_m1_20221130</li><li>multi_point_calibration_PSA_range1_m1</li></ul></li><li>range1 m2<ul><li>Calibration_PSA_range1_m2_20221209</li><li>multi_point_calibration_PSA_range1_m2</li></ul></li><li>range1 m3<ul><li>Calibration_PSA_range1_m3_20221214</li><li>multi_point_calibration_PSA_range1_m3</li></ul></li><li>range1 m4<ul><li>Calibration_PSA_range1_m4_20230915</li><li>multi_point_calibration_PSA_range1_m4</li></ul></li><li>range1 m5<ul><li>Calibration_PSA_range1_m5_20230919</li><li>multi_point_calibration_PSA_range1_m5</li></ul></li><li>range2 m1<ul><li>Calibration_PSA_range2 m1 20221006</li><li>multi_point_calibration_PSA_range2_m1</li></ul></li><li>range2 m2<ul><li>Calibration_PSA_range2 m2 20221011</li><li>multi_point_calibration_PSA_range2_m2</li></ul></li><li>range2 m3<ul><li>Calibration_PSA_range2 m3 20221012</li><li>multi_point_calibration_PSA_range2_m3</li></ul></li><li>short-term drift<ul><li>m1<ul><li>Calibration mercury gas generator range1 short term drift 20221012 deel 1</li><li>PSA_short_term_drift_M1</li></ul></li><li>m2<ul><li>Calibration mercury gas generator range1 short term drift 20221012 deel 2</li><li>PSA_short_term_drift_M2</li></ul></li><li>m3<ul><li>Calibration mercury gas generator range1 short term drift 20221012 deel 3</li><li>PSA_short_term_drift_M3</li></ul></li><li>m4<ul><li>Calibration mercury gas generator range1 short term drift 20221012 deel 4</li><li>PSA_short_term_drift_M4</li></ul></li></ul></li><li>stability<ul><li>Calibration mercury gas generator range2 stability 20220811</li><li>Calibration mercury gas generator stability 20221018</li></ul></li></ul>

IDSL.GOA - data elements and relationships

The files are used as input for the IDSL.GOA online tool to compute the gene ontology analysis enrichment statistics for a list of metabolites.

Phylogenetic analysis, morphological studies, element profiling, and muscarine detection reveal a new toxic Inosperma (Inocybaceae, Agaricales) species from tropical China

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opencc-by-4.0Dec 2023View details →

Disentangling Historical Relationships Within Poeciliidae (Teleostei: Cyprinodontiformes) Using Ultraconserved Elements

The present dataset contains alignments and trees associated with the article "Disentangling Historical Relationships Within Poeciliidae (Teleostei: Cyprinodontiformes) Using Ultraconserved Elements". Raw reads can be found at http://www.ncbi.nlm.nih.gov/bioproject/992473

opencc-by-4.0Dec 2023View details →

Elements of Karl Popper's Philosophy as the Foundation of a Sociology of the Internet

Talk at the <a href="https://www.digital-philosophy.org/" target="_blank" rel="noopener">Philosophy [in:of:for:and] Digital Knowledge Infrastructures</a> online workshop 2023 (28/09/2023).

opencc-by-4.0Feb 2024View details →

Supplementary data and scripts for the publication "Discovery of numerous novel Helitron-like elements in eukaryote genomes using HELIANO"

##Information of directories. Each directory contains necessary data and scripts to do the corresponding analysis 1. Benchmarking/: benchmarking analysis for heliano. (For Figure 3, Supplementary Table S2) 2. GeneCapture/: analysis for captured genes within HLEs. (For Figure 6, Supplementary Table S11) 3. HLE_model_species/: analysis for heliano results on three model species. (For Table 1, Figure 4, Supplementary Table S5-9, Supplementary Figure 4) 4. HLE_sampled_species/: analysis for heliano results on 404 sampled species. (For Figure 5, Supplementary Table S10, Supplementary Figure 5) 5. hmm_model/: build hmm model for Hel and Rep domains. (For RepHel.hmm that is important to detect and classify HLEs) 6. Phylogenetical_tree/: making phylogenetical trees. (For Figure 1, Supplementary Figure 2-3) 7. Sample_species/: about how to sample species from various genome assemblies. (Supplementary Table S3) 8. HLE_feature/: information about the position of RepHel domain and the length of HLE sequences. (Supplementary Figure 1)

Validation and Benchmark Dataset for Discrete Element Method Simulations

Verification and Benchmark Dataset for Discrete Element Method Simulations v3 (05/02/2024) Authors: Jose Salomon, Fernando Patino-Ramirez, Catherine O'Sullivan https://doi.org/10.5281/zenodo.10160309 Contact: jjs19@ic.ac.uk -------------------------------------------------------------------- Description of the repository: This repository contains a collection of datafiles and scripts that can be employed to validate and benchmark new or existing DEM codes.  Two validation cases/folders are considered "FCC_packing" and "Rolling_clump". The benchmark dataset is provided in the "Toyoura_sh" folder. All datafiles and scripts are in the corresponding *.zip files. A detailed description of all cases can be found in the related article. In each of these folders, two sub-folders can be found: (1)"Data" and (2)"Scripts". These folders contain: 1)"Data": contains the datafiles to perform the validation or benchmark. Two types of data/folders can be found here: "Raw" and "Filtered". The "Raw" folder contains raw data only. The "Filtered" data contains the post-processed data employed to generate the plots found in the related article. Plots in the related article can be reproduced by using the MATLAB files found in the corresponding data folder. 2)"Scripts": contains the LAMMPS scripts used to generate the data files contained in "Data". Indications about how to run these scripts can be found in the "README.txt" file in each folder. In order to reproduce the simulations of this repository, LAMMPS must be built including the "GRANULAR" and "RIGID" packages. Please check the README.txt files in each folder for details.

opencc-by-4.0Feb 2024View details →

Major and trace elements abundance of the Belbashani Pumice and other Hasandag deposits, Central Anatolian Volcanic Province

Glass microchemical data, including major and trace elements, of the Belbashani Pumice, a Plinian eruption produced by Hasandag volcano about 400ka ago within the Central Anatolian Volcanic Province (CAVP)

opencc-by-4.0Aug 2017View details →

Figure 7. Hypothetical apparatus reconstruction deduced from the element arrangement within the Caudicriodus woschmidti conodont cluster. A, Model 1 in A new icriodontid conodont cluster with specific mesowear supports an alternative apparatus motion model for Icriodontidae

Figure 7. Hypothetical apparatus reconstruction deduced from the element arrangement within the Caudicriodus woschmidti conodont cluster. A, Model 1 with tips of coniform elements pointing dorsally and 'posterior' part of icriodontan elements oriented ventrally. B, Model 2 with tips of coniform elements and 'posterior' part of icriodontan elements oriented ventrally. C, Model 3 with tips of coniform elements pointing ventrally and 'posterior' part of icriodontan elements oriented dorsally. D, Model 4 with tips of coniform elements and 'posterior' part of icriodontan elements oriented ventrally. Coniform elements are arranged in multiple rows.

opencc-by-4.0Mar 2024View details →

Data from: "Rare earth elements sediment analysis tracing anthropogenic activities in the stratigraphic sequence of Alagankulam (India)"

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opencc-by-4.0Apr 2023View details →

Figure 2. Ischnacanthiform acanthodian dermal elements. A in Acanthodian fauna from the Early Devonian (Emsian) of Death Valley, California

Figure 2. Ischnacanthiform acanthodian dermal elements. A, fin spine FMNH-PF14560; B, fin spine fragment FMNH-PF14561. C, D, dentigerous jaw bone FMNH-PF14562, labial view; boxed area in C is enlarged in D. Scale bars=0.5 mm in A–C, 0.1 mm in D. Arrow indicates rostral direction.

opencc-by-4.0Apr 2024View details →

Spontaneous fission half-lives of actinides and superheavy elements

The uploaded files contain data colected during the studies of the super-heavy elements within the micro-micro model LSD. The results of the studies were published in the paper : J. Marin Blanco, A. Dobrowolski, A. Zdeb, and J. Bartel, Phys. Rev. C 108, 044618 – Published 30 October 2023. Addidtionaly, there is uploaded the pdf file of the publication. The results are related to the project No. 2021/43/P/ST2/03036 co-funded by theNational Science Centre and the European Union FrameworkProgramme for Research and Innovation Horizon 2020 under the Marie Skłodowska-Curie grant agreement no. 945339.

FIG. 2 in Finite element analysis of the proximal phalanx of the thumb in Hominoidea during simulated stone tool use

FIG. 2. — Free-body diagram of the phalanx in the different scenarios. This figure depicts the boundary conditions, areas of insertion of muscles, and direction of forces. For all loading configurations, joint reaction forces resulted from the rigid boundary constraints that were fixed at the distal joint in X, Y and Z-axes (light blue area), and at the proximal joint in the X-axis (dark blue area). The hammer reaction force (HRF) was applied to the entire palmar surface of the bone. 3.29 N for the HRF was simulated for Sc 1 and 3, and 7.65 N for Sc 2 and 4. Phalanges are shown in palmar (right) and radial (left) views.

FIG. 5 in Finite element analysis of the proximal phalanx of the thumb in Hominoidea during simulated stone tool use

FIG. 5. — Box-plots of von Mises stress (MPa) distribution for all species under different scenarios, until Q95 (Sc 1 in grey, Sc 2 in yellow, Sc 3 in green and Sc 4 in red). The first row shows stress distribution of the models using the extant human as a reference to scale muscular forces in all other specimens, whereas the second one shows the results when the chimpanzee is used as a reference. Species are ordered from higher to lower peak stresses.

FIG. 1 in Finite element analysis of the proximal phalanx of the thumb in Hominoidea during simulated stone tool use

FIG. 1. — Biomechanical model of hammerstone use: B, corresponds to a zoom in palmar view of the area of interest during A, the grip of a human individual (based on Marzke et al. 1998). B, shows the angles of the muscular forces acting on the PP1. HRF is in 90° relative to the horizontal line for scenarios 1 and 2 and in 45° for scenarios 2 and 4. This force was applied on the entire palmar surface of the PP1 except in the joint areas and is represented with a hatched rectangle. Angles of the muscle forces are shown relative to the horizontal line. Abbreviations: FAP, Adductor Pollicis Force; FAPB, Abductor Pollicis Brevis Force; FFPB, Flexor Pollicis Brevis Force; EPB, direction force was applied in 16.7° and is not showed here as it attached on the dorsal surface of the PP1. Grey rectangles represent the origin areas of the muscles.

FIG. 3 in Finite element analysis of the proximal phalanx of the thumb in Hominoidea during simulated stone tool use

FIG. 3. — Von Mises stress maps for all analyzed species under different loading scenarios using the extant human as reference to scale the simulated muscular forces in all other specimens. Species are ordered from higher to lower peak stresses values. Phalanges are shown at the same length. MPa bar is set at 12 MPa.

FIG. 4 in Finite element analysis of the proximal phalanx of the thumb in Hominoidea during simulated stone tool use

FIG. 4. — Von Mises stress maps for all analyzed species under different loading scenarios using the chimpanzee as reference to scale the simulated muscular forces in all other specimens. Species are ordered from higher to lower peak stresses values. Images are not scaled. MPa is set at 25 MPa.

TABLE 2 in Finite element analysis of the proximal phalanx of the thumb in Hominoidea during simulated stone tool use

TABLE 2. — Percentage of main locomotor behavoir of the non-human sample, according to Hunt (2004).<table><tbody><tr><th>Taxon</th><th>Climb</th><th>Braquiate</th><th>Clamber</th><th>Walk</th></tr></tbody><tbody><tr><th>Chimpanzee</th><td>6.5</td><td>0.8</td><td>0.0</td><td>89.9</td></tr><tr><th>Gorilla</th><td>19.7</td><td>3.6</td><td>0.0</td><td>64.4</td></tr><tr><th>Orangutan</th><td>31.3</td><td>15.5</td><td>40.7</td><td>12.0</td></tr><tr><th>Gibbon</th><td>34.2</td><td>51.2</td><td>0.0</td><td>0.0</td></tr></tbody></table>

opencc-by-4.0Oct 2021View details →

Scale dependent spatial structuring of mountain river large bed elements maximizes flow resistance - Data

Datasets and R code related to manuscript entitled, "Scale dependent spatial structuring of mountain river large bed elements maximizes flow resistance". See '0_READ_ME.rtf' file for additional description of available files.