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4,566 results for “marker”
CLDF dataset derived from Auderset's "Interrogatives as relativization markers in Indo-European" from 2020
<p>Cite the source of the dataset as:</p> ...
Data described in the article "Glycopolymer Inhibitors of Galectin-3 Suppress the Markers of Tissue Remodeling in Pulmonary Hypertension"
<p>The dataset includes supplementary data, i.e. experimental data, tables, and figures detailing the synthetic procedures, compound characterization, binding assays, and cell culture studies of the study titled "Glycopolymer Inhibitors of Galectin‑3 Suppress the Markers of Tissue Remodeling in Pulmonary Hypertension" available here: https://doi.org/10.1021/acs.jmedchem.4c00341</p>
Figure 4 in Introgression of bacterial leaf blight (BLB) resistant gene, Xa7 into MARDI elite variety, MR219 by marker assisted backcrossing (MABC) approach
Figure 4. PCR-based genetic polymorphism analysis of Xa7 gene closed linked, ID7 marker. Agarose gel profile of backcrossed progenies in 2% (w/v) of 1X TBE agarose gel. Lane L: 100bp DNA ladder. Lanes D and R represent IRBB7 and MR219 respectively. Line 1-22: (1) PB-2-91, (2) PB-2-107, (3) PB-2-156, (4) PB-2-224, (5) PB-2-234, (6) PB-2-238, (7) PB-2-258, (8) PB-2-29, (9) PB-2-77, (10) PB-2-226, (11) PC3-26-2, (12) PC-39-3, (13) PB-2-34, (14) PB-2-35, (15) PB-2-150, (16) PB-2-223, (17) PB-2-252, (18) PC-3-14-3, (19) PC-3-23-1, (20) PB-2-32, (21) PC3-5-2, (22) MR263.
Figure 3 in Introgression of bacterial leaf blight (BLB) resistant gene, Xa7 into MARDI elite variety, MR219 by marker assisted backcrossing (MABC) approach
Figure 3. Differential response of parents. (A) MR263, (B) CL2, (C) IRBB7 and (D) MR219, respectively after being inoculated with Xanthomonas oryzae pv. oryzae at 14 DAI.
Figure 2 in Introgression of bacterial leaf blight (BLB) resistant gene, Xa7 into MARDI elite variety, MR219 by marker assisted backcrossing (MABC) approach
Figure 2. Bacterial leaf blight disease progression recorded on four potential parents; IRBB7 (blue), MR219 (orange), CL2 (gray) and MR219 (yellow) from 3 to 30 days after inoculation.
Redefining the clade Spirale of the genus Trichoderma by re-analyses of marker sequences and the description of new species
<p>Alingnments used to build the phylogenetic trees shown in the manuscript.</p> <p>Antagonism - data on antagonism of Trichoderma species against plant pathogens.</p> <p>Clade comparisons - data used to build Fig S6.</p>
Fig. 5 in A new subfamily classification of the Citrus family (Rutaceae) based on six nuclear and plastid markers
Fig. 5. Ancestral state reconstruction for the characters growth form, flower symmetry, corolla tube, and winged vs. unwinged seeds. See Fig. 2 for taxon names.
Fig. 2 in A new subfamily classification of the Citrus family (Rutaceae) based on six nuclear and plastid markers
Fig. 2. Phylogenetic reconstruction of Rutaceae. The Bayesian 50% majority-rule consensus tree based on the concatenated alignments of all six markers is shown. Posterior probability (PP) and bootstrap (BS) support values are displayed next to each branch. Strongly supported branches are marked with an asterisk (*), branches with moderate and low support in the ML analyses are represented by a degree symbol (°) and a hash key (#) respectively. A hyphen (-) indicates branches that lack statistical support.
Fig. 1 in A new subfamily classification of the Citrus family (Rutaceae) based on six nuclear and plastid markers
Fig. 1. Diversity of flowers and fruits in Rutaceae. A, Trimerous and haplostemonous flower of Cneorum tricoccon L.; B, Tetramerous and diplostemonous flower of Ruta graveolens L.; C, Pentamerous and diplostemonous flower of Philotheca verrucosa (A.Rich.) Paul G.Wilson; D, Pentamerous and polystemonous flower of Citrus trifoliata L.; E, Zygomorphic flower of Dictamnus albus L.; F, Zygomorphic flower of Ravenia spectabilis (Lindl.) Planch. ex Griseb.; G, Tubular flower with connate petals of Correa lawrenceana Hook.; H, Inconspicuous flowers with tepals of the apomictic Zanthoxylum simulans Hance; I, Pendulous, capitate inflorescence with showy bracts of Diplolaena grandiflora Desf.; J, Baccate fruit of Triphasia trifolia (Burm.f.) P.Wilson; K, Capsular fruit of Melicope clusiifolia (A.Gray) T.G.Hartley & B.C.Stone, in which seeds remain attached to the carpels; L, Capsular fruit of Dictamnus albus L., in which seeds are ejected at maturity; M, Drupaceous fruit of Acronychia brassii T.G.Hartley; N, Young winged drupes of Spathelia splendens Urb.; O, Samaroid fruit of Ptelea trifoliata L.; P, Capsular fruit of Flindersia australis R.Br. — All photos by Marc S. Appelhans, except (F) by Milton Groppo and (P) by Paul I. Forster.
Fig. 4 in A new subfamily classification of the Citrus family (Rutaceae) based on six nuclear and plastid markers
Fig. 4. Ancestral state reconstruction for the characters ovules per locule, fruit type, presence of endosperm, and chromosome number. Dashed gray lines indicate unknown character states. See Fig. 2 for taxon names.
Fig. 5 in Phylogenetic relationships of the bumblebees Bombus moderatus, B. albocinctus, B. burjaeticus, B. florilegus and B. cryptarum based on mitochondrial DNA markers: a complex of closely related taxa with circumpolar distribution (Hymenoptera: Apidae: Bombus))
Fig. 5: Tree topology calculated as Maximum-Likelihood tree using Bayesian MCMC analysis with the general time reversal model of base substitution and gamma distribution for degraded DNA of museum specimens, only parsimony informative triplets included.
Fig. 4 in Phylogenetic relationships of the bumblebees Bombus moderatus, B. albocinctus, B. burjaeticus, B. florilegus and B. cryptarum based on mitochondrial DNA markers: a complex of closely related taxa with circumpolar distribution (Hymenoptera: Apidae: Bombus))
Fig. 4: Observed diagnostic character changes with position numbers mapped onto the Maximum- Likelihood tree. Black box = unambiguous diagnostic charactercharacter change, grey box = ambiguous diagnostic charactercharacter change, and white box = character change.
Fig. 3 in Phylogenetic relationships of the bumblebees Bombus moderatus, B. albocinctus, B. burjaeticus, B. florilegus and B. cryptarum based on mitochondrial DNA markers: a complex of closely related taxa with circumpolar distribution (Hymenoptera: Apidae: Bombus))
Fig. 3: Alignment of all parsimonious informative triplets (with uninformative sites deleted -), and with a pointer for position number (numbered for total COI) and codon position. Diagnostic (= private) positions marked with colour green = Thymine, violet = Cytosine, red = Adenine and yellow = Guanine.
Fig. 2 in Phylogenetic relationships of the bumblebees Bombus moderatus, B. albocinctus, B. burjaeticus, B. florilegus and B. cryptarum based on mitochondrial DNA markers: a complex of closely related taxa with circumpolar distribution (Hymenoptera: Apidae: Bombus))
Fig. 2: Tree topology calculated as Maximum-Likelihood tree using Bayesian MCMC analysis with the general time reversal model of base substitutions with gamma distribution.
SQLite3 databases of candidate marker loci from ddRADseq in Quercus suber, Quercus ilex and their hybrids
<p>The dataset contatins four SQLite3 databases of candidate marker loci from ddRADseq in <em>Quercus suber</em>, <em>Quercus ilex </em>and their hybrids, corresponding to the data collected for the four filtering/imputation scenarios considered in the manuscript "ddRAD sequencing-based identification of species genomic boundaries and permeability in <em>Quercus ilex</em> and <em>Q. suber</em> hybrids" submitted to Frontiers in Plant Sciences. This work was funded by the project AGL2015-67495-C2-2-R (Spanish Ministry of Economy and Competitiveness).</p>
Low molecular weight seaweed–derived polysaccharides lead to increased faecal bulk but do not alter human gut health markers
<p>Differential analysis of taxa before and after the consumption of either agar, alginate or maltodextrin showed no significant change at phylum or family level (<strong>Supplementary tables 1-2</strong>). </p> <p><em>Supplementary Table 1: Differential abundance analysis with ALDEX2 on family level</em></p> <p><em>Supplementary Table 2: Differential abundance analysis with ALDEX2 on phylum level</em></p>
Clausal Causal Markers in the Languages of Europe: A Database
<p>The present typological database accumulates clausal causal markers in the languages of Europe. Clausal causal markers are used in polypredicative constructions (cf. <em>I fell down, because the floor was slippery</em>). The database contains more than 100 markers from Russian, Ukrainian, Belarusian, Polish, Czech, Slovak, Serbian, Bulgarian, Macedonian, Latvian, Lithuanian, German, English, Dutch, Danish, Swedish, Norwegian, Portuguese, Spanish, French, Italian, Catalan, Modern Greek, Albanian, Estonian, Finnish, Hungarian, Basque, Chuvash, and Georgian (currently 30 languages in total). The data were collected from grammars and language corpora and via elicitation.</p> <p>The typological parameters taken into consideration are:</p> <p>1) semantic varieties of causal meanings: direct causal meaning (<em>I fell down, because the floor was slippery</em>); motive (<em>As it is your birthday today, I have bought you a present</em>); inferential (<em>Peter is at home, because he is not at work</em>); illocutionary-imperative (<em>Wrap it up with your packing, or (= because) you'll be late for your train</em>); illocutionary-question<em> </em>(<em>How much are the cucumbers, because I want to take a couple of kilos?</em>); logic (<em>It is a triangle, because it has three angles</em>);</p> <p>2) assessment (positive vs. negative);</p> <p>3) reality of the cause;</p> <p>4) stylistic features;</p> <p>5) morphosyntactic features (position of the marker within the clause, preposition vs. postposition of the causal clause; occurrence in emphatic constructions and under negation, etc.)</p> <p>6) diachronic information and polysemy patterns.</p> <p>Further updates and expansion of the database are possible.</p> <p>The database was created at the Institute for Linguistic Studies, RAS with support from the Russian Science Foundation grant # 18-18-00472 “Causal Constructions in World Languages (Semantics and Typology)”.</p>
Supplementary material for "Marker and source-marker reprogramming of Most Permissive Boolean networks and ensembles with BoNesis"
<p>This archive contains supplementary material for the paper <a href="https://doi.org/10.48550/arXiv.2207.13307">Marker and source-marker reprogramming of Most Permissive Boolean networks and ensembles with BoNesis</a> by Loïc Paulevé (2023):</p> <ul> <li>sources of the executable paper in Markdown and Jupyter notebook formats</li> <li>benchmark dataset</li> <li>scripts for converting the executable paper in LaTeX for arXiv deposit</li> </ul>
Supplementary data to publication "Abomasal infusion of essential fatty acids and conjugated linoleic acid during late pregnancy and early lactation affects immunohematological and oxidative stress markers in dairy cows"
<p>Supplementary data to publication "Abomasal infusion of essential fatty acids and conjugated linoleic acid during late pregnancy and early lactation affects immunohematological and oxidative stress markers in dairy cows" in Journal of Dairy Science; DOI: <a href="https://doi.org/10.3168/jds.2022-22514">https://doi.org/10.3168/jds.2022-22514</a></p>
Peripheral T-cell profiling reveals downregulated exhaustion marker and increased diversity in lymphedema post-lymphatic venous anastomosis
<p>In this study, we compared T cell receptor (TCR) repertoire diversity between patients with lymphedema, post-lymphatic venous anastomosis and healthy controls (HCs). TCR diversity was decreased in lymphedema compared with HCs; such TCR skewing was drastically improved in post-LVA.</p>
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.