Find research datasets worth reusing
Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.
1,353
datasets available to search
ShareScore release 0.9.0
Dataset results
1,353 results for “single-cell transcriptomics”
Single-cell transcriptome analysis of uniparental embryos reveals parent-of-origin effects on human preimplantation development
GEO Series GSE133856. Homo sapiens. 327 samples. Type: Expression profiling by high throughput sequencing; Methylation profiling by high throughput sequencing.
T cell-mediated SIV dissemination into the CNS: a single-cell transcriptomic analysis
GEO Series GSE293543. Macaca mulatta; Homo sapiens. 14 samples. Type: Expression profiling by high throughput sequencing.
Transcriptomic comparison of young and aged choroid at the bulk and single-cell levels (single cells)
GEO Series GSE149100. Homo sapiens. 8 samples. Type: Expression profiling by high throughput sequencing.
Single-cell Transcriptome Profiling of SW480 tumors from zebrafish xenografts
GEO Series GSE163750. Homo sapiens. 5 samples. Type: Expression profiling by high throughput sequencing.
Comparison of imaging based single-cell resolution spatial transcriptomics profiling platforms using formalin-fixed paraffin-embedded tumor samples [Xenium]
GEO Series GSE300007. Homo sapiens. 6 samples. Type: Other.
Single-Cell transcriptomes and immune profiling of IgG+ murine memory B cells from Bone Marrow and Spleen.
GEO Series GSE139836. Mus musculus. 8 samples. Type: Expression profiling by high throughput sequencing.
Single-cell transcriptomics reveals the natural product cannabinoid rewires tumor microenvironment via inhibiting alternative activation of macrophage and synergizes with PD-1 blockade
GEO Series GSE220635. Mus musculus. 4 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
Cross-species single-cell transcriptomic analysis reveals divergence of cell composition and functions in mammalian ileum epithelium
GEO Series GSE196663. Rattus norvegicus; Sus scrofa; Mus musculus; Macaca mulatta. 4 samples. Type: Expression profiling by high throughput sequencing.
Single-cell transcriptome profiling for metastatic renal cell carcinoma patient-derived cells [RNA-seq]
GEO Series GSE73121. Homo sapiens. 121 samples. Type: Expression profiling by high throughput sequencing.
Single-Cell Transcriptome Profiling Reveals Intratumoral Heterogeneity and Molecular Features in Ductal Carcinoma In Situ of the Breast
GEO Series GSE196208. Homo sapiens. 1 samples. Type: Expression profiling by high throughput sequencing; Other.
Acoel single-cell transcriptomics: cell-type analysis of a deep branching organism
GEO Series GSE154049. Isodiametra pulchra. 2 samples. Type: Expression profiling by high throughput sequencing.
The Tumor Microenvironment of Laryngeal Squamous Cell Carcinoma Revealed by Single-Cell Transcriptomics [II]
GEO Series GSE252490. Homo sapiens. 3 samples. Type: Expression profiling by high throughput sequencing.
Single-cell RNA sequencing enables transcriptomic analysis of iPSC-derived beta-cells in a model of neonatal diabetes caused by insulin mutations.
GEO Series GSE115257. Homo sapiens. 4 samples. Type: Expression profiling by high throughput sequencing.
Single-cell transcriptomic and targeted genomic profiling reveal CRTAM and PLCB1 as novel hub genes for anti-TNFα therapy response in Crohn's disease
GEO Series GSE269631. Homo sapiens. 6 samples. Type: Expression profiling by high throughput sequencing.
Long-read single-cell RNA transcriptomics reveals a signature of PIK3CA mutation in a human capillary malformation
GEO Series GSE253153. Homo sapiens. 1 samples. Type: Expression profiling by high throughput sequencing.
High throughput error correction using dual nucleotide dimer blocks allows direct single-cell nanopore transcriptome sequencing
GEO Series GSE162053. Mus musculus; Homo sapiens. 6 samples. Type: Expression profiling by high throughput sequencing.
Characterizing Local Extension of Retinoblastoma by Single-cell Transcriptomics
GEO Series GSE249995. Homo sapiens. 4 samples. Type: Expression profiling by high throughput sequencing.
Brain and blood single-cell transcriptomic analysis in acute and subacute phases after experimental stroke
GEO Series GSE225948. Mus musculus. 29 samples. Type: Expression profiling by high throughput sequencing.
Differentiation of transplanted haematopoietic stem cells tracked by single-cell transcriptomic analysis
GEO Series GSE116530. Mus musculus. 54 samples. Type: Expression profiling by high throughput sequencing.
Identification of a drug-response gene in multiple myeloma through longitudinal single-cell transcriptome sequencing.
GEO Series GSE193695. Homo sapiens. 148 samples. Type: Expression profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.