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3,878 results for “Molecular Data”
FIGURE 4. Cymbidium biflorens. A. Flowering plant. B. Petal. C. Sepal. D. Column. E. Lip. F in Cymbidium biflorens (Orchidaceae; Epidendroideae), a new species from China: evidence from morphological and molecular data
FIGURE 4. Cymbidium biflorens. A. Flowering plant. B. Petal. C. Sepal. D. Column. E. Lip. F. Pollinarium. Drawn by Xing-Yu Liao.
FIGURE 1 in Cymbidium biflorens (Orchidaceae; Epidendroideae), a new species from China: evidence from morphological and molecular data
FIGURE 1. Phylogenetic relationships of C. biflorens based on the combined plastid and nuclear data. The numbers near the nodes are Bayesian posterior probabilities (PP), maximum likelihood bootstrap percentages (BP) and maximum parsimony bootstrap percentages ML (BP). "*" indicates that the node has BP 100 or PP 1.00. "-" indicates that the node is incongruent between the Bayesian and MP/ML MP trees.
FIGURE 2 in Cymbidium biflorens (Orchidaceae; Epidendroideae), a new species from China: evidence from morphological and molecular data
FIGURE 2. Phylogenetic relationships of C. biflorens based on the combined plastid DNA. The numbers near the nodes are Bayesian
FIGURE 3 in Cymbidium biflorens (Orchidaceae; Epidendroideae), a new species from China: evidence from morphological and molecular data
FIGURE 3. Phylogenetic relationships of C. biflorens based on the nuclear DNA (ITS). The numbers near the nodes are Bayesian posterior probabilities (PP), maximum likelihood bootstrap percentages (BP) and maximum parsimony bootstrap percentages (BP). ML MP "*" indicates that the node has BP 100 or PP 1.00. "-" indicates that the node is incongruent between the Bayesian and MP/ML trees.
FIGURE 2. Sciaphila kozushimensis from type locality. A. Rachis. B–H. Male flower. I–J in Sciaphila kozushimensis (Triuridaceae), a new mycoheterotrophic plant from Kozu Island, Izu Islands, Japan, based on morphological and molecular data
FIGURE 2. Sciaphila kozushimensis from type locality. A. Rachis. B–H. Male flower. I–J. Female flower (I. Above view. J. Bottom view). K. Immature carpel with stigma. G. Immature fruit. Bar = 2 mm (A), 1 mm (B–J) and 0.5 mm (K).
FIGURE 5 in Sciaphila kozushimensis (Triuridaceae), a new mycoheterotrophic plant from Kozu Island, Izu Islands, Japan, based on morphological and molecular data
FIGURE 5. Maximum likelihood phylogeny of Sciaphila kozushimensis (bold) and its related taxa based on the rDNA ITS sequences. Maximum likelihood and neighbor-joining branching supports are indicated below branches as ML/NJ.
FIGURE 3. A in Sciaphila kozushimensis (Triuridaceae), a new mycoheterotrophic plant from Kozu Island, Izu Islands, Japan, based on morphological and molecular data
FIGURE 3. A flowering plant of Sciaphila kozushimensis (drawn from the holotype). Drawn by Kumi Hamasaki. Bar = 1 cm.
FIGURE 4 in Sciaphila kozushimensis (Triuridaceae), a new mycoheterotrophic plant from Kozu Island, Izu Islands, Japan, based on morphological and molecular data
FIGURE 4. Sciaphila kozushimensis (drawn from the holotype). A. Flowering plant. B–C. Female flower. D–I. Male flower. J–K. Immature carpel with stigma. G. Immature fruits. Bar = 1 cm (A), 1 mm (B–I) and 0.3 mm (J–K). Drawn by Kumi Hamasaki.
FIGURE 4. Phylogenetic tree with bootstrap values inferred from trnL-F in Revisit of European-Asiatic connections in Tayloria rudolphiana (Splachnaceae, Bryophyta) based on molecular data and new morphological evidence
FIGURE 4. Phylogenetic tree with bootstrap values inferred from trnL-F sequences (accession numbers after each species name obtained from Genbank) based on Maximum Likelihood and Maximum Parsimony analyses. Values above the branches indicate bootstrap (>50%) and numbers below the branches indicate PP values of Bayesian.
FIGURE 3. Phylogenetic tree with bootstrap values inferred from rps4 in Revisit of European-Asiatic connections in Tayloria rudolphiana (Splachnaceae, Bryophyta) based on molecular data and new morphological evidence
FIGURE 3. Phylogenetic tree with bootstrap values inferred from rps4 sequences (accession numbers after each species name obtained from Genbank) based on Maximum Likelihood and Maximum Parsimony analyses. Values above the branches indicate bootstrap (>50%) and numbers below the branches indicate PP values of Bayesian.
FIGURE 1. Tayloria rudolphiana. A in Revisit of European-Asiatic connections in Tayloria rudolphiana (Splachnaceae, Bryophyta) based on molecular data and new morphological evidence
FIGURE 1. Tayloria rudolphiana. A. Habit in field. B. Dry habit (left); wet habit (right). C. Perichaetial leaves. D. Upper leaves. E. Low leaves. F–G. leaf apices. H. Midleaf. I. Basal leaf. J. Juxtacostal cells at midleaf. K. Median laminal cells. L. Basal laminal cells. (All photo images prepared from He & Yi 49798, MO).
FIGURE 2. Tayloria rudolphiana. A. Young sporophyte. B. Calyptra. C–D. Capsules. E. Columella with spore sac. F. Peristome teeth. G. Stomata. H. Axillary hairs. I in Revisit of European-Asiatic connections in Tayloria rudolphiana (Splachnaceae, Bryophyta) based on molecular data and new morphological evidence
FIGURE 2. Tayloria rudolphiana. A. Young sporophyte. B. Calyptra. C–D. Capsules. E. Columella with spore sac. F. Peristome teeth. G. Stomata. H. Axillary hairs. I. Cross sections of stem. J. Cross sections of leaves at midleaf. (All photo images prepared from He & Yi 49798, MO).
FIGURE 3 in Affinities of four freshwater putative "Chantransia" stages (Rhodophyta) in Southern China from molecular and morphological data
FIGURE 3. Bayesian inference tree based on the rbcL gene sequences. Support values for all analyses are shown as follows: Bayesian posterior probabilities/ML bootstrap/NJ distance bootstrap. PP <0.95 and ML bootstrap/NJ <50.0/50 are denoted by '-'. All new sequences generated in this study are indicated in red boxes.
FIGURE 4 in Affinities of four freshwater putative "Chantransia" stages (Rhodophyta) in Southern China from molecular and morphological data
FIGURE 4. Bayesian inference tree based on the psbA gene sequences. Support values for all analyses are shown as follows: Bayesian posterior probabilities/ML bootstrap/NJ distance bootstrap. PP <0.95 and ML bootstrap/NJ <50.0/50 are denoted by '-'. All new sequences generated in this study are indicated in red boxes.
FIGURE 5 in Affinities of four freshwater putative "Chantransia" stages (Rhodophyta) in Southern China from molecular and morphological data
FIGURE 5. Bayesian analysis tree based on the combined sequences. Support values for all analyses are shown as follows: Bayesian posterior probabilities/ML bootstrap. PP <0.95 and ML bootstrap <50.0 are denoted by '-'. All new sequences generated in this study are indicated in red boxes.
FIGURE 2 in Affinities of four freshwater putative "Chantransia" stages (Rhodophyta) in Southern China from molecular and morphological data
FIGURE 2. Habitat and morphological structures of four putative "Chantransia" isolates in this study. Scale bar 20 μm (c, f, g, j, k, n and o).
FIGURE 2 in A new species of Clavariadelphus (Basidiomycota: Clavariadelphaceae) from China based on morphological and molecular data
FIGURE 2. Clavariadelphus griseoclavus (BJTC FM964, holotype). a. Basidiomata. b. Hyphae with clamp connections. c. Basidiospores. d. Basidia. e. Leptocystidia. Scale bars: (a) 10 mm; (b) 10 μm; (c) 5 μm; (d) 10 μm; (e) 10 μm. Photo by: Li Fan. Drawings by: Lu Xia.
FIGURE 1 in A new species of Clavariadelphus (Basidiomycota: Clavariadelphaceae) from China based on morphological and molecular data
FIGURE 1. Phylogeny derived from maximum likelihood analysis of the ITS sequences from Clavariadelphus and related species. Ramaria abetonensis and R. luteovernalis as outgroup taxa. Numbers in the right represent likelihood bootstrap support values (≥70 %). Numbers in the left represent significant Bayesian posterior probability values (≥ 0.95). Novel sequences are highlighted in bold on the tree.
Experimental and Simulation data for the molecular mechanism of temperature-dependent phase separation of HSF1
<p>1. lmp_datatfile</p> <p>The documents contain the LAMMPS input datafiles of initial configuration used to run all simulations, including single chain, trimer(LZ1-3-RD), and RD systems.</p> <p>2.Experimental data.</p> <p>The documents contain original ucsf data</p>
Long-term adaptation of lymphoma cell lines to hypoxia is mediated by diverse molecular mechanisms that are targetable with specific inhibitors - Supplemental Data Tables
<p><strong>Supplemental Data Table - Metabolome.xlsx</strong> - a complete list of measured metabolites for Ramos and HBL2 cell lines. Peak area values for normoxic and hypoxia-adapted cells in triplicates. Mean log 2 fold change and adjusted P values are provided for all metabolites except those under the limits of detection.</p> <p><strong>Supplemental Data Table - Transcriptome Differential Expression.xlsx</strong> - the tables of all transcripts detected in hypoxia-adapted HBL2 and Ramos lymphoma cell lines compared to normoxic controls. Fold change and log 2 fold change, log 2 CPM, F statistic, P value and False Discovery Rate (FDR) were calculated using EdgeR package. Last column shows if a transcript was significantly <em>up</em>- or <em>down</em>regulated or not (<em>ns</em>).</p> <p><strong>Supplemental Data Table - Transcriptome Gene Set Analysis.xlsx</strong> - the tables of the gene set enrichment analysis of Reactome pathways in hypoxia-adapted HBL2 and Ramos lymphoma cell lines compared to normoxic controls.</p> <p><strong>Supplemental Data Table - Proteome Differential Expression.xlsx</strong> - the tables of proteins detected and differentially expressed in hypoxia-adapted HBL2 and Ramos lymphoma cell lines compared to normoxic controls.</p> <p><strong>Supplemental Data Table - Cell lines SNV characterization.xlsx</strong> - the tables of mutations (single nucleotide variations and short indels) detected in four tested lymphpoma cell lines and corresponding primary tumor (PT) samples. AF_CTRL - allelic frequency (0..1) in healthy control DNA from the patient, AF_PT - allelic frequency in primary tumor, AF_PDCL - allelic frequency in patient-derived cell line. DP - total sequence depth, TLOD - Log odds that the variant is present in the tumor sample relative to the expected noise. Gencode and HGNC annotation columns are output of the Funcotator analysis. SNVs were detected using Mutect2 as a part of GATK 4.6.0.0 somatic variat calling pipeline.</p>
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Allen Brain Atlas
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Annotated Behaviour and Observability Dataset (ABODe)
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DANDI Archive for NWB datasets
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International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.