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13,621 results for “biology”
Figure 7 in Reproductive Biology of the Mice and Rats (Family Muridae) in New Guinea-Diversity and Evolution
Figure 7. Scanning electron micrographs of spermatozoa from (a) Chiruromys vates, (b) Pogonomys loriae with inset a fluorescent LM stained with DAPI showing nucleus, (c) Pogonomys macrourus, (d) Pogonomys sylvestris, (e) Hyomys goliath with arrow indicating ventral spike on sperm head, and (f) Mallomys aroaensis inset fluorescent LM stained with DAPI showing nucleus. AH = apical hook and VPs = ventral processes of sperm head. Scale bars a–d = 0.7 µm, e and f = 1.4 µm.
Figure 4 in Reproductive Biology of the Mice and Rats (Family Muridae) in New Guinea-Diversity and Evolution
Figure 4. Boxplot of maximum sperm tail length (µm) for species in the divisions (H) Hydromys, (U) Uromys, (P) Pogonomys, (M) Mallomys, and (R) Rattus.
Figure 2 in Reproductive Biology of the Mice and Rats (Family Muridae) in New Guinea-Diversity and Evolution
Figure 2. Boxplot showing maximum numbers of fetuses across the species in the divisions (H) Hydromys, (U) Uromys, (P) Pogonomys, (M) Mallomys, and (R) Rattus.
Figure 1 in Reproductive Biology of the Mice and Rats (Family Muridae) in New Guinea-Diversity and Evolution
Figure 1. Boxplot showing nipple numbers for species in the divisions (H) Hydromys, (U) Uromys, (P) Pogonomys, (M) Mallomys, and (R) Rattus.
Figure 5 in Reproductive Biology of the Mice and Rats (Family Muridae) in New Guinea-Diversity and Evolution
Figure 5. Light micrographs of spermatozoa from (a) Leptomys elegans, (b) Melomys rufescens, (c) Pogonomys championi, (d) Pogonomys loriae, (e) Abeomelomys sevia, (f) Anisomys imitator, and (g) Rattus steini. Scale bars a = 4 µm, b–g = 5 µm.
Fig. 2 in Ex-situ conservation of the critically endangered swamp forest crab Parathelphusa reticulata Ng, 1990 (Decapoda: Brachyura: Gecarcinucidae): observations on its reproduction and biology in captivity
Fig. 2. Top view of captive conditions of a, adult crab (CW: 30 mm); b, crablet (CW: 4 mm); c, juvenile crab (CW: 15 mm); d, Setup for pairing individuals. Photographs: Dian Alisha Binte Misba.
Fig. 4 in Ex-situ conservation of the critically endangered swamp forest crab Parathelphusa reticulata Ng, 1990 (Decapoda: Brachyura: Gecarcinucidae): observations on its reproduction and biology in captivity
Fig. 4. Growth of captive Parathelphusa reticulata (F1 generation) over 52 weeks (N = 20). Vertical bars indicate standard deviations.
Dataset - Mumme et al. 2023 Global Change Biology
<p>Dataset used in Mumme et al. (2023) Wherever I may roam – Human activity alters movements of red deer (<em>Cervus elaphus</em>) and elk (<em>Cervus canadensis</em>) across two continents. For full list of funding information, please see the acknowledgement section of the original article (<a href="https://doi.org/10.1111/gcb.16769">https://doi.org/10.1111/gcb.16769</a>).</p>
Figures 9–13 in Colletes jankowskyi (Hymenoptera: Colletidae) newly recorded from Japan, with some biological notes and DNA barcodes
Figures 9–13. Photographs of Colletes jankowskyi Radoszkowski, its habitat, and floral hosts in Japan. 9. Female on flowers of Lespedeza cyrtobotrya Miq. 10. Habitat in Japan (Chojyabaru, Kokonoe-machi, Kusu-gun, Oita Prefecture, Kyushu). 11. L. cyrtobotrya. 12. Aralia cordata Thunb. 13. Echinops setifer Iljin.
Figure 8 in Colletes jankowskyi (Hymenoptera: Colletidae) newly recorded from Japan, with some biological notes and DNA barcodes
Figure 8. Phenology of Colletes jankowskyi Radoszkowski at Chojyabaru, Kokonoe-machi, Kusugun, Oita Prefecture, Kyushu, Japan, in 2015.
Figures 5–7 in Colletes jankowskyi (Hymenoptera: Colletidae) newly recorded from Japan, with some biological notes and DNA barcodes
Figures 5–7. Illustrations of 7th metasomal sternum for three species of Colletes Latreille (red arrows indicate central areas, blue arrows indicate lateral processes; setae omitted except for right side of Colletes jankowskyi Radoszkowski, right sides omitted from other species). 5. Colletes floralis Eversmann. 6. C. babai Hirashima & Tadauchi. 7. C. jankowskyi.
Figures 1–2 in Colletes jankowskyi (Hymenoptera: Colletidae) newly recorded from Japan, with some biological notes and DNA barcodes
Figures 1–2. Photographs of Colletes jankowskyi Radoszkowski. 1. Lateral habitus of female. 2. Lateral habitus of male.
Supporting data for "Reliable interpretability of biology-inspired deep neural networks"
<p><strong>Contents</strong></p> <p><em>data.tgz</em> contains all data necessary for reproducing the analysis in the manuscript. After cloning the GitHub repository, extract the contents of this file into folder <em>data</em>. The archive contains the following subfolders:</p> <ul> <li><em>dtox</em><br> DTox results, one subfolder per seed <ul> <li><em>module_relevance.tsv</em>: contains node importance scores, with the following columns: <ul> <li>(first, unnamed): compound identifier</li> <li>remaining columns: node identifiers (UniProt and Reactome IDs)</li> </ul> </li> <li><em>test_labels.csv</em>: predictions for the test set, with two columns: <ul> <li>truth: true label (0 or 1)</li> <li>predicted: predicted label (decimal number between 0 and 1)<br> </li> </ul> </li> </ul> </li> <li><em>mskimpact_[cancer type]_[experiment]</em><br> P-NET results using the MSK-IMPACT 2017 dataset, one subfolder per seed<br> [cancer type] is one of bc (breast cancer), cc (colorectal cancer), nsclc (non-small cell lung cancer), or pc (prostate cancer)<br> [experiment] is one of original (original setup) and shuffled (shuffled labels)<br> </li> <li><em>pnet_[experiment]</em><br> P-NET results using the original (prostate cancer) dataset, one subfolder per seed<br> [experiment] is one of deterministic (deterministic input data), original (original setup), and shuffled (shuffled labels) <ul> <li><em>node_importance.csv</em>: contains node importance scores, with the following columns: <ul> <li>(first, unnamed): node name</li> <li>coef: original node importance scores</li> <li>coef_graph: indegree plus outdegree of node</li> <li>coef_combined: adjusted node importance score (= coef / coef_graph if coef_graph > mean(coef_graph) + 5 sd(coef_graph) in the respective layer)</li> <li>coef_combined_zscore: scaled coef_combined</li> <li>coef_combined2: z(z(coef_graph) - z(coef))</li> <li>layer: layer of the node</li> </ul> </li> <li><em>predictions_test.csv</em>: predictions for the test set, with the following columns: <ul> <li>(first, unnamed): sample name</li> <li>pred: predicted class (unfortunately, encoded by a double 1.0 or 0.0)</li> <li>pred_scores: probability of the predicted class</li> <li>y: true class (encoded as integer 1 or 0)</li> </ul> </li> <li><em>predictions_train.csv</em>: predictions for the training set (same columns as above)</li> <li><em>link_weights_[layer].csv</em>: only in subfolder 234_20080808; matrices with edge weights</li> </ul> </li> </ul> <p> </p> <p><strong>Changelog</strong></p> <p><em>v1.1.0 – 2023-06-28</em></p> <ul> <li>added DTox results</li> <li>added results of P-NET experiments with MSK-IMPACT 2017 dataset</li> </ul> <p><em>v1.0.0 – 2023-03-22</em></p> <ul> <li>initial release</li> </ul>
Figure 4 in Is a diet of Planococcus citri nymphs and adults suitable for Chrysoperla externa for use in biological control?
Figure 4. Survival (x100%) of Chrysoperla externa adults from larvae fed on (A) Ephestia kuehniella eggs and/or Planococcus citri nymphs and adults, as a function of gender (B), female and male. Curves with an asterisk (*) differ by the log-rank test (Kaplan-Meier, p<0.05). EK= E. kuehniella eggs; EK + PC= E. kuehniella eggs in the first instar and P. citri in subsequent instars; PC= P. citri in all instars. F= females; M= males.
Figure 3 in Is a diet of Planococcus citri nymphs and adults suitable for Chrysoperla externa for use in biological control?
Figure 3. Weight (mg) of Chrysoperla externa males and females from larvae fed on Ephestia kuehniella eggs and/or Planococcus citri nymphs and adults. Means ± SE followed by different letters, uppercase for prey types and lowercase for females and males, differ from each other by the Tukey test (p<0.05). EK= E. kuehniella eggs; EK + PC= E. kuehniella eggs in the first instar and P. citri in subsequent instars; PC= P. citri in all instars.
Figure 2 in Is a diet of Planococcus citri nymphs and adults suitable for Chrysoperla externa for use in biological control?
Figure 2. (A) Duration (days) and (B) survival (x100%) of the preimaginal period of Chrysoperla externa for larvae fed on Ephestia kuehniella eggs and/or Planococcus citri nymphs and adults. Means ± SE under the horizontal bar differ from each other by the Dunn test (Kruskal-Wallis, p<0.05). Means containing an asterisk* differ from each other by the log-rank test (Kaplan-Meier). EK= E. kuehniella eggs; EK + PC= E. kuehniella eggs in the first instar and P. citri in subsequent instars; PC= P. citri in all instars.
Figure 2. A in Biology of the oribatid mite Acrotritia clavata (Märkel, 1964) from the mangrove ecosystems of North Kerala, India
Figure 2. A. Adult of Acrotritia clavata showing egg inside the body, B. Adult of A. clavata with fully developed larva (LA), C. Newly emerged larva (LA) and protonymph (PN), D. Protonymph and its quiescent phase, E. Deutonymph (DN) feeding on dead filaments of Microspora sp. and quiescent deutonymph, F. Tritonymph (TN) and quiescent tritonymph, G. Moulting of quiescent tritonymph to adult (A) and moulting skin (MS) of quiescent tritonymph, H. Newly emerged adult (A) (Scale bar=1mm).
Figure 1 in Biology of the oribatid mite Acrotritia clavata (Märkel, 1964) from the mangrove ecosystems of North Kerala, India
Figure 1. Geographical description of mangrove ecosystems at Kadalundi-Vallikkunnu Community Reserve (Image accessed via Google Earth Pro Software).
Figure 4 in Biology of the oribatid mite Acrotritia clavata (Märkel, 1964) from the mangrove ecosystems of North Kerala, India
Figure 4. SEM image of Acrotritia clavata (lateral view). A. Aspis with prodorsal setae (in, le and ro), B. Enlarged view of aspis showing clavate sensillus (ss), bothridium (bo) and lateral carina (car), C. Genital plate with 6 pairs of small fine genital setae (g1-6).
FIG. 9 in Newly discovered fossils provide novel insights on the biology of the South American Miocene snake Colombophis Hoffstetter & Rage, 1977
FIG. 9. — Comparison of vertebrae ratios for Colombophis spp.: A, pr-po/h, vertebra length to high ratio; B, pr-po/pr-pr vertebra length to width ratio; C, cl/naw, centrum length to neural arch width ratio; D, pr-pr/h vertebra width to high ratio; E, zw/ctw, zygosphene width to cotyle width ratio; F, pr-po/naw, vertebrae length to neural arch width ratio.
ScienceDex guides
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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.