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The genotypic data of elite European cultivar panel comprising 358 winter and 14 summer wheat varieties released from 1975 to 2007 at different marker densities
<p>This submission contains the genotpying data corresponding to the GABI-WHEAT and its subset TROST panel, at different densities i.e 35k, 90k for GABI-WHEAT and 135k for TROST panel. Additionally, the marker oligo sequences, envisioned to be used for mapping to wheat reference genome for obtaining marker phyical positions and thus assist genomic interoperability, are included. </p> <p>(35k, 135k and 90k are names given to markers originating from Affymetrix [Allen et al., 2017*; Muqaddasi et al., 2019, Muqaddasi et al., 2020**] and 90k iSELECT [Wang et al., 2014***] SNP array chips)</p> <p>*https://doi.org/10.1111/pbi.12635</p> <p>**https://doi.org/10.3835/plantgenome2018.05.0029</p> <p>***https://doi.org/10.1111/pbi.12183</p>
FIGURE 3. UPGMA dendrogram 33 in Analysis of genetic diversity among five closely related species used as 'Xihuangcao' herbs using ISSR and SCoT molecular markers
FIGURE 3. UPGMA dendrogram 33 populations of 'Xihuangcao' based on SCoT.
FIGURE 4 in Analysis of genetic diversity among five closely related species used as 'Xihuangcao' herbs using ISSR and SCoT molecular markers
FIGURE 4. Principal coordinate analysis of 33 populations of 'Xihuangcao' based on SCoT.
FIGURE 2 in Analysis of genetic diversity among five closely related species used as 'Xihuangcao' herbs using ISSR and SCoT molecular markers
FIGURE 2. Principal coordinate analysis of 33 populations of 'Xihuangcao' based on ISSR.
FIGURE 127 in Revision of the Genus Leptogomphus Selys in Borneo, including gene trees and a two marker molecular phylogeny (Odonata: Anisoptera: Gomphidae)
FIGURE 127. Distribution of L. pasia (white circle) and L. sii (black square).
FIGURE 129 in Revision of the Genus Leptogomphus Selys in Borneo, including gene trees and a two marker molecular phylogeny (Odonata: Anisoptera: Gomphidae)
FIGURE 129. Distribution of L. williamsoni (black square) and L. sp. cf williamsoni (red triangle).
Supplementary material 3 from: Vamos E, Elbrecht V, Leese F (2017) Short COI markers for freshwater macroinvertebrate metabarcoding. Metabarcoding and Metagenomics 1: e14625. https://doi.org/10.3897/mbmg.1.14625
Overview of similarity of used inline tags for the fwh1 and fwh2 fusion primers.
Supplementary material 2 from: Vamos E, Elbrecht V, Leese F (2017) Short COI markers for freshwater macroinvertebrate metabarcoding. Metabarcoding and Metagenomics 1: e14625. https://doi.org/10.3897/mbmg.1.14625
Developed fusion primers for fwh1 and fwh2 on the Illumina high throughput sequencing platform.
Supplementary material 11 from: Vamos E, Elbrecht V, Leese F (2017) Short COI markers for freshwater macroinvertebrate metabarcoding. Metabarcoding and Metagenomics 1: e14625. https://doi.org/10.3897/mbmg.1.14625
Proportion of shared reads between the two replicates for DceM amplified with the fwh1 primer set.
Supplementary material 10 from: Vamos E, Elbrecht V, Leese F (2017) Short COI markers for freshwater macroinvertebrate metabarcoding. Metabarcoding and Metagenomics 1: e14625. https://doi.org/10.3897/mbmg.1.14625
OTU table for the 52 taxa mock samples sequenced with the fwh1 and fwh2 primer set.
Supplementary material 1 from: Vamos E, Elbrecht V, Leese F (2017) Short COI markers for freshwater macroinvertebrate metabarcoding. Metabarcoding and Metagenomics 1: e14625. https://doi.org/10.3897/mbmg.1.14625
Primers evaluated in this study
Supplementary material 5 from: Vamos E, Elbrecht V, Leese F (2017) Short COI markers for freshwater macroinvertebrate metabarcoding. Metabarcoding and Metagenomics 1: e14625. https://doi.org/10.3897/mbmg.1.14625
Overview of the macroinvertebrates composition of the three sample sites in Romania.
Supplementary material 12 from: Vamos E, Elbrecht V, Leese F (2017) Short COI markers for freshwater macroinvertebrate metabarcoding. Metabarcoding and Metagenomics 1: e14625. https://doi.org/10.3897/mbmg.1.14625
Sample composition of Romanian macroinvertebrate samples.
Supplementary material 9 from: Vamos E, Elbrecht V, Leese F (2017) Short COI markers for freshwater macroinvertebrate metabarcoding. Metabarcoding and Metagenomics 1: e14625. https://doi.org/10.3897/mbmg.1.14625
Number of raw sequences obtained for each sample after demultiplexing.
Supplementary material 7 from: Vamos E, Elbrecht V, Leese F (2017) Short COI markers for freshwater macroinvertebrate metabarcoding. Metabarcoding and Metagenomics 1: e14625. https://doi.org/10.3897/mbmg.1.14625
Gradient PCR optimisation for the fwh primer sets.
Supplementary material 6 from: Vamos E, Elbrecht V, Leese F (2017) Short COI markers for freshwater macroinvertebrate metabarcoding. Metabarcoding and Metagenomics 1: e14625. https://doi.org/10.3897/mbmg.1.14625
Overview of used tagging combinations for sample multiplexing for sequencing.
Supplementary material 4 from: Vamos E, Elbrecht V, Leese F (2017) Short COI markers for freshwater macroinvertebrate metabarcoding. Metabarcoding and Metagenomics 1: e14625. https://doi.org/10.3897/mbmg.1.14625
Overview of the three Romanian macrozoobenthos sampling sites (Z2, L2, R2).
Construction and clinical significance of prognostic risk markers based on cancer driver genes in lung adenocarcinoma
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4D-Var-marker-in-cell data assimilation
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FIGURE 20 in Markers in the polytene chromosomes of freshwater Chironomus Meigen (Diptera, Chironomidae) species
FIGURE 20 (B). Figure continued.
ScienceDex guides
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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.