Find research datasets worth reusing
Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.
11,105
datasets available to search
ShareScore release 0.9.0
Dataset results
11,105 results for “single cells”
Landscape of intercellular crosstalk in fatty liver disease revealed by single-cell secretome analysis
GEO Series GSE129516. Mus musculus. 6 samples. Type: Expression profiling by high throughput sequencing.
Single-Cell Profiling of Murine Bladder Cancer Identifies Sex Specific Transcriptional Signatures with Prognostic Relevance
GEO Series GSE229168. Mus musculus. 10 samples. Type: Expression profiling by high throughput sequencing.
Shared transcriptional profiles at the single cell level of atypical memory B cells suggest common drivers of expansion and function in malaria, HIV and autoimmune diseases [HIV scRNA-seq]
GEO Series GSE157966. Homo sapiens. 3 samples. Type: Expression profiling by high throughput sequencing.
Case study of a neuroendocrine tumor of uncertain origin: single-cell transcriptomics unravels potential primary source
GEO Series GSE282219. Homo sapiens. 1 samples. Type: Expression profiling by high throughput sequencing.
Single cell RNA sequencing and TCR repertoire analysis of MIS-C affected patients versus healthy controls and severe adult COVID-19
GEO Series GSE184330. Homo sapiens. 16 samples. Type: Expression profiling by high throughput sequencing.
Single-cell multi-omics sequencing of mouse early embryos and embryonic stem cells
GEO Series GSE78140. Mus musculus. 329 samples. Type: Methylation profiling by high throughput sequencing; Expression profiling by high throughput sequencing.
Human and rat skeletal muscle single-nuclei multi-omic integrative analyses nominate causal cell types, regulatory elements, and SNPs for complex traits [snATAC-seq]
GEO Series GSE178733. Rattus norvegicus; Homo sapiens. 12 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Utilizing single-cell variations to reveal environment-dependent tuning of network connectivity in human macrophages (RNA-Seq, CAGE and ChIP-Seq)
GEO Series GSE80727. Homo sapiens. 29 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
Single-cell RNA-Seq of kidneys of Brg1-deficiency and wild type mice
GEO Series GSE200301. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing.
Single-cell and spatial architecture of human tissue granulomas reveals an aberrant immune-regulatory program underlying sarcoidosis [spatial transcriptomics data]
GEO Series GSE192460. Homo sapiens. 21 samples. Type: Expression profiling by high throughput sequencing.
Transcriptome and BCR profile at single cell level of influenza neuraminidase (NA) specific pre-exisiting memory B cells in health adults
GEO Series GSE282064. Homo sapiens. 4 samples. Type: Expression profiling by high throughput sequencing; Other.
Single-cell transcriptomics of the embryonic mouse pancreas
GEO Series GSE132364. Mus musculus. 58 samples. Type: Expression profiling by high throughput sequencing.
Single-cell and spatial transcriptome analysis revealed the immunomodulatory role of T cells in the colon cancer tumor microenvironment
GEO Series GSE289314. Homo sapiens. 14 samples. Type: Expression profiling by high throughput sequencing.
Description of Bacterial RNA Transcripts Detected in Mycobacterium tuberculosis – Infected Cells from Peripheral Human Granulomas using Single Cell RNA Sequencing
GEO Series GSE281835. Homo sapiens. 2 samples. Type: Expression profiling by high throughput sequencing.
Single cell RNA-seq of seizure-affected brain tissue with mosaic copy number gain of chromosome 1q
GEO Series GSE221849. Homo sapiens. 7 samples. Type: Expression profiling by high throughput sequencing.
Single Cell Transcriptomic Analysis of Prostate Cancer Cells
GEO Series GSE38416. Homo sapiens. 48 samples. Type: Expression profiling by array.
High-throughput combinatorial indexing enables scalable single-cell chromatin accessibility profiling [species mixture]
GEO Series GSE123579. Homo sapiens; Mus musculus. 5 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
SUGAR-Seq enables simultaneous detection of glycans, epitopes and the transcriptome in single cells [LN scRNA-seq]
GEO Series GSE166325. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing.
Single cell analysis of the postnatal dorsal V-SVZ reveals a role for Bmpr1a-signaling in silencing pallial germinal activity
GEO Series GSE186003. Mus musculus. 4 samples. Type: Expression profiling by high throughput sequencing.
Single cell multi-omic dissection of response and resistance to chimeric antigen receptor T cells against BCMA in relapsed multiple myeloma
GEO Series GSE234261. Homo sapiens. 100 samples. Type: Expression profiling by high throughput sequencing; Other.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.