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Figure 10 in A checklist of the non-leaf-cutting fungus-growing ants (Hymenoptera, Formicidae) from Colombia, with new biogeographic records
Figure 10. Paratrachymyrmex species encountered in Colombia. A, B. Paratrachymyrmex diversus, CASENT0901693. C, D. Paratrachymyrmex irmgardae, CASENT0909392. E, F. Paratrachymyrmex phaleratus, D. Mera-Rodríguez. Photographs taken by W. Erichson and obtained from the Antweb database (http://www.antweb.org).
Figure 9 in A checklist of the non-leaf-cutting fungus-growing ants (Hymenoptera, Formicidae) from Colombia, with new biogeographic records
Figure 9. Mycetomoellerius and Paratrachymyrmex species encountered in Colombia. A, B. Mycetomoellerius jamaicensis, CASENT0919971/ M. Esposito. C, D. Mycetomoellerius urichii, CASENT0904990/ W. Ericson. E, F. Paratrachymyrmex bugnioni, CASENT0919968/ M. Esposito. G, H. Paratrachymyrmex cornetzi, CASENT0909389/ W. Ericson. Photographs obtained from the Antweb database (http://www.antweb.org).
Figure 3 in A checklist of the non-leaf-cutting fungus-growing ants (Hymenoptera, Formicidae) from Colombia, with new biogeographic records
Figure 3. Apterostigma species encountered in Colombia. A, B. Apterostigma chocoense, CASENT0922037. C, D. Apterostigma collare, CASENT0922041. E, F. Apterostigmadentigerum, CASENT0922039. G, H. Apterostigma goniodes, CASENT0922040. Photographs taken by M. Esposito obtained from the Antweb database (http://www.antweb.org).
Figure 5 in A checklist of the non-leaf-cutting fungus-growing ants (Hymenoptera, Formicidae) from Colombia, with new biogeographic records
Figure 5. Apterostigma and Cyphomyrmex species encountered in Colombia. A, B. Apterostigma reburrum, CASENT0901686/ R. Perry. C, D. Apterostigma robustum, CASENT0904977/ Z. Lieberman. E, F. Apterostigma pilosum complex, CASENT0603533/ A. Nobile. G, H. Cyphomyrmex cornutus, CASENT0923103/ W. Lee. Photographs obtained from the Antweb database (http://www.antweb.org).
Supplementary files for Silva et al. 2020 "Reptiles on the wrong track?": R Code, data and figures
<p>Datasets, R code and figures pertaining to the manuscript: Silva, I., Crane, M., Marshall, B.M., & Strine, C.T. (2020).<em> </em> <em>Reptiles on the wrong track? Moving beyond traditional estimators with dynamic Brownian Bridge Movement Models.</em> Movement Ecology 8, 43 DOI: 10.1186/s40462-020-00229-3</p> <p>Article available at: <a href="https://movementecologyjournal.biomedcentral.com/articles/10.1186/s40462-020-00229-3">https://movementecologyjournal.biomedcentral.com/articles/10.1186/s40462-020-00229-3</a></p>
Figure 6 in Four New Bat Species (Rhinolophus hildebrandtii Complex) Reflect Plio-Pleistocene Divergence of Dwarfs and Giants across an Afromontane Archipelago
Figure 6. Relative warps analysis (RWA) of 13 dorsal cranial landmarks from 22 individuals of R. hildebrandtii s.l. belonging to two molecular clades and two lineages of Clade 1 (see Fig. 3). Revised taxon names are provided in parentheses (see Taxonomic Conclusions). Skulls which were included in this analysis are indicated in Table S1. Symbols as in Fig. 5. Thin plate splines (grids) show landmark distortions represented by extremes of variation on RW1 (left = negative; right = positive) and RW2 (bottom = negative; top = positive) axes. The two skull photographs at the bottom are of actual specimens representing the negative (left: TM 41997ı smithersi from Pafuri) and positive (right: DM 11560ı cohenae from Mayoı Mpumalanga Province) extremes of variation on RW1. Landmark positions (filled circles) are shown in the photograph in the centre. doi:10.1371/journal.pone.0041744.g006
Figure 9 in Four New Bat Species (Rhinolophus hildebrandtii Complex) Reflect Plio-Pleistocene Divergence of Dwarfs and Giants across an Afromontane Archipelago
Figure 9. Dorsal (D), ventral (V) and lateral (L) view of bacula (tips on right) from four individuals (a–d) from Mpumalanga (Clade 1a = cohenae sp. nov.), two (e–f) from lowland sites in Mozambique (Clade 2 = mossambicus sp. nov.) and one (g) from Mt Mabu in Mozambique (Clade 1b = mabuensis sp. nov.). a = DM 11558 (Sudwala); b = DM 11620 (Barberton Tunnel; Topotype of cohenae); c = DM 11560 (Mayo); d = DM 11618 (Barberton Tunnel); e = DM 8580 (Gorongosa); f = DM 8578 (Niassa GR; Holotype of mossambicus); g = DM 10842 (Mt Mabu; Holotype of mabuensis). Bacula of Clade 1a (cohenae sp. nov.) have spatulate tip (rounded in Clades 2 (mossambicus sp. nov.) and 1b (mabuensis sp. nov.))ı typically emarginated basal portion (less so in Clades 2 and 1b) and shaft laterally compressed (cylindrical in Clades 2 and 1b) and sloping downwards in lateral view (horizontal in Clades 2 and 1b). doi:10.1371/journal.pone.0041744.g009
Figure 5 in Four New Bat Species (Rhinolophus hildebrandtii Complex) Reflect Plio-Pleistocene Divergence of Dwarfs and Giants across an Afromontane Archipelago
Figure 5. Canonical variates analysis (CVA) (a) of 10 cranial variables in five groups of the Rhinolophus hildebrandtii complex defined by molecular analysis; and PCA (b) of five cranial variables for sample in (a) with type series of hildebrandtii (''H¹'') and eloquens (''E¹'') added. Open circles = Clade 1a (= cohenae sp. nov.); closed circles = Clade 1b (= mabuensis sp. nov.); shaded circles = Clade 1d (= smithersi sp. nov.; Pafuri); asterisk enclosed in circle = Clade 1e (= smithersi sp. nov.; Zimbabwe); open squares = Clade 2 (mossambicus sp. nov.; Mozambique); shaded squares = Clade 2 (mossambicus sp. nov.; Lutopeı Zimbabwe); open diamonds = R. eloquens type series (Clade 3); crosses in circles = R. hildebrandtii type and co-type (Clade 1c). doi:10.1371/journal.pone.0041744.g005
Figure 1 in Four New Bat Species (Rhinolophus hildebrandtii Complex) Reflect Plio-Pleistocene Divergence of Dwarfs and Giants across an Afromontane Archipelago
Figure 1. Portraits of (a) Rhinolophus smithersi species novo, and (b) Rhinolophus mossambicus species novo, two of four new cryptic species described herein within the R. hildebrandtii complex. doi:10.1371/journal.pone.0041744.g001
Figure 4 in Four New Bat Species (Rhinolophus hildebrandtii Complex) Reflect Plio-Pleistocene Divergence of Dwarfs and Giants across an Afromontane Archipelago
Figure 4. Morphometric variation in a series representing the R. hildebrandtii complex from Lutope-Ngolangola, Zimbabwe: a) biplot of forearm length versus noseleaf width and b) PCA of five craniometric variables (M3M3, CM3, IOC, NW, NH) in 26 individuals of known (37 or 46 kHz) and unknown (?) frequency. Females indicated by open circlesı males by closed circles or crosses or asterisk. Voucher specimens for molecular sequencing study indicated by asterisk (Clade 1e: = smithersii sp. nov.; see Taxonomic Conclusions) and crosses (Clade 2: = mossambicus sp. nov.; see Taxonomic Conclusions). Hereafterı all individuals with a frequency of 37 kHz were assumed to belong to Clade 2 (mossambicus sp. nov.) and the 46 kHz individual was assumed to belong to Clade 1e (smithersi sp. nov.). doi:10.1371/journal.pone.0041744.g004
Figure 3. Consensus tree for the cytochrome b in Four New Bat Species (Rhinolophus hildebrandtii Complex) Reflect Plio-Pleistocene Divergence of Dwarfs and Giants across an Afromontane Archipelago
Figure 3. Consensus tree for the cytochrome b dataset for representative genotyped specimens of the Rhinolophus hildebrandtii complex. The topology represents the consensus topology from a 20 million MCMC run implemented in BEAST. Estimates of divergence times (million years ago; Mya) are indicated adjacent to nodes or above branches and grey bars indicate 95% HPD values. The split between the Hipposideridae and Rhinolophidae was used as the calibration point. Taxa names include museum/field numbers which correspond to Appendix S1 or GenBank accession numbers and abbreviations are: RcfH - R. cf. hildebrandtiiı RD - R. darlingiı RE - R. eloquensı RF - R. fumigatusı RH - R. hildebrandtii s.l.ı RL - R. landeri and RR - R. ruwenzorii. Localitiesı where availableı are providedı abbreviations include SA - South Africaı MZ - Mozambiqueı and ZW - Zimbabweı and the numbers in parentheses correspond with place names in Table S1 and Fig. 2 for Clade 1 and 2 individuals. doi:10.1371/journal.pone.0041744.g003
Figure 7 in Four New Bat Species (Rhinolophus hildebrandtii Complex) Reflect Plio-Pleistocene Divergence of Dwarfs and Giants across an Afromontane Archipelago
Figure 7. Relative warps analysis (RWA) of 12 lateral cranial landmarks from 23 individuals of R. hildebrandtii s.l. belonging to two molecular clades and two lineages of Clade 1 (see Fig. 3). Revised taxon names are provided in parentheses (see Taxonomic Conclusions). Skulls which were included in this analysis are indicated in Table S1. Symbols as is in Fig. 5. Thin plate splines (grids) show landmark distortions represented by extremes of variation on RW1 (left = negative; right = positive) and RW2 (bottom = negative; top = positive) axes. The two skull photographs at the bottom are of actual specimens representing the negative (left: DM 8577ı mossambicus from Namapaı Mozambique) and positive (right: DM 11560ı cohenae from Mayoı Mpumalanga Province) extremes of variation on RW1. Landmark positions (filled circles) are shown in the photograph in the centre. doi:10.1371/journal.pone.0041744.g007
Figure 4 in Phenotypic Convergence in Genetically Distinct Lineages of a Rhinolophus Species Complex (Mammalia, Chiroptera)
Figure 4. The bacula of five species of Rhinolophidae. Dorsal (row D), ventral (V) and lateral (L) views. Row Bis the dorsal view of the base of each baculum. a) R. damarensis (Orange River), b) R. damarensis (Taung, TM 48040), c) R. darlingi (TM 47947), d) R. capensis (TM 40574), e) R. blasii (TM 7080), f) R. clivosus (TM46882). All figures are to the same scale and the scale line (bottom right) = 1 mm.
Figure 2 in Description of two new Quadrastichus (Hymenoptera: Eulophidae) reared from Litchiomyia chinensis (Diptera: Cecidomyiidae) on commercial lychee (Litchi chinensis; Sapindaceae) in Taiwan
Figure 2. Quadrastichus lasallei, female: a, anterolateral head; b, dorsal mesosoma; c, propodeum; g, lateral flagellum; h, lateral clava. Q. lasallei, male: d, lateral flagellum; e, lateral clava; f, lateral scape.
Figure 5 in First record of the genus Setelacher Bouček (Hymenoptera: Eulophidae: Eulophinae) from the Afrotropical regionı with description of a new species
Figure 5. Habitats of Setelacher lasallei Gumovsky and van Noort, sp. nov. (a–c) Uganda, Kibale National Park, Kanyawara, primary mid-altitude rainforest (the type locality); (d, e) Uganda, Semuliki National Park; (f) Central African Republic, Réserve Spéciale de Forêt Dense de Dzanga-Sangha, Sangha River, lowland rainforest; (g) Central African Republic, Parc National de Dzanga-Ndoki, Mabéa Bai, lowland rainforest, marsh clearing; (h) Gabon, view (from base) of Monts Doudou in clouds on left; (i) Gabon, Réserve des Monts Doudou, sampling site at peak (660 m) of Monts Doudou.
Figure 3 in First record of the genus Setelacher Bouček (Hymenoptera: Eulophidae: Eulophinae) from the Afrotropical regionı with description of a new species
Figure 3. Setelacher lasallei Gumovsky and van Noort, sp. nov., scanning electron microscopy. (a, b) Mesosoma: (a) in lateral view, (b) in dorsal view; (c) propodeum; (d, e) posterior end of metasoma. bc, basal cup of propodeum; mt8, syntergum of metasoma; pl, lateral plica of propodeum; arrows indicate lateral sulci at mesoscutellum.
Figure 1 in Description of two new Quadrastichus (Hymenoptera: Eulophidae) reared from Litchiomyia chinensis (Diptera: Cecidomyiidae) on commercial lychee (Litchi chinensis; Sapindaceae) in Taiwan
Figure 1. (a) Quadrastichus johnlasallei, lateral habitus, female. (b) Quadrastichus lasallei, lateral habitus, female.
Figure 1 in First record of the genus Setelacher Bouček (Hymenoptera: Eulophidae: Eulophinae) from the Afrotropical regionı with description of a new species
Figure 1. Setelacher lasallei Gumovsky and van Noort, sp. nov., holotype, light microscopy. (a–c) Habitus: (a, b) in lateral view; (c) in dorsal view; (d) head in frontal view; (e) wings.
Figure 1 in Lasalleistichus a new genus of Tetrastichinae (Hymenoptera: Eulophidae) from the Neotropical regionı including four new species
Figure 1. (a) Lasalleistichus albiclava, ♀ holotype habitus lateral. (b) L. albifasciatus, ♀ holotype habitus lateral. (c–e) L. albiclava ♀: (c) paratype head frontal; (d) paratype fore wing; (e) holotype habitus dorsal. (f) L. albifasciatus, ♀ holotype habitus dorsal. Scales: (a–b, e–f) 1 mm; (c–d) 0.5 mm.
Figure 2 in First record of the genus Setelacher Bouček (Hymenoptera: Eulophidae: Eulophinae) from the Afrotropical regionı with description of a new species
Figure 2. Setelacher lasallei Gumovsky and van Noort, sp. nov., scanning electron microscopy. (a) head, mesosoma and posterior metasoma; (b) head in dorso-lateral view; (c) head in ventro-frontal view; (d) head in frontal view; (E) lower face in frontal view.
ScienceDex guides
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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.