Find research datasets worth reusing
Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.
11,105
datasets available to search
ShareScore release 0.9.0
Dataset results
11,105 results for “single cells”
Coordinated single cell tumor microenvironment dynamics reinforce pancreatic cancer subtype
GEO Series GSE231535. Homo sapiens. 2 samples. Type: Expression profiling by high throughput sequencing.
Single-cell profiling of myeloid cells in glioblastoma across species and disease stage reveals macrophage competition and specialization
GEO Series GSE163120. Mus musculus; Homo sapiens. 14 samples. Type: Expression profiling by high throughput sequencing.
Gene expression profile at single cell level of CD45+ immune cells in both peripheral blood mononuclear cells (PBMCs) and allograft biopsy samples obtained from kidney transplant recipients
GEO Series GSE230606. Homo sapiens. 4 samples. Type: Expression profiling by high throughput sequencing.
Single-cell chromatin accessibility of developing murine pancreas identifies cell state-specific gene regulatory programs
GEO Series GSE210569. Mus musculus. 6 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Droplet-based high-throughput 3D genome structure mapping of single cells with simultaneous transcriptomics (dscHi-C multiome)
GEO Series GSE285233. Mus musculus. 6 samples. Type: Other.
Multi-omics characterization of human Embryonic Stem Cells-derived Pharyngeal Endoderm cells (Single-cell RNA-Seq Batch_2)
GEO Series GSE274133. Homo sapiens. 4 samples. Type: Expression profiling by high throughput sequencing.
Characterization of human pluripotent stem cell differentiation by single-cell dual-omics analyses (scATAC-seq)
GEO Series GSE216323. Homo sapiens. 2 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Single-cell gene expression profiling of MYCN-amplified neuroblastoma cells following CRISPR activation of ferroptosis regulators
GEO Series GSE210762. Homo sapiens. 4 samples. Type: Expression profiling by high throughput sequencing; Other.
Inherent single-cell heterogeneity of the transcriptional response to hypoxia in cancer cells.
GEO Series GSE292771. Homo sapiens. 6 samples. Type: Expression profiling by high throughput sequencing.
Natural display of nuclear-encoded RNA on the cell surface and its impact on cell interaction [Single Cell RNA-seq]
GEO Series GSE150233. Homo sapiens. 2 samples. Type: Expression profiling by high throughput sequencing.
Single Cell Transcriptome Profiling of Cardiac Non-myocyte
GEO Series GSE157444. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing.
Single-cell targeted DNA methylation analysis of human B cells
GEO Series GSE198019. Homo sapiens. 7 samples. Type: Methylation profiling by high throughput sequencing; Other.
Gene expression profile at single cell level of zebrafish trunk from WT or flt1 mutant (3dpf).
GEO Series GSE227806. Danio rerio. 4 samples. Type: Expression profiling by high throughput sequencing.
Single-cell transcription mapping of neural subtype development in human spinal cord
GEO Series GSE136719. Homo sapiens. 78 samples. Type: Expression profiling by high throughput sequencing.
Single-cell RNA sequencing reveals novel markers of pituitary stem cells and hormone-producing cell-types
GEO Series GSE120410. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing.
Single-cell RNA-seq of hiPSCs under 5iLAF naïve culture conditions
GEO Series GSE197889. Homo sapiens. 1 samples. Type: Expression profiling by high throughput sequencing.
Multiplex profiling of developmental enhancers with quantitative, single-cell expression reporters [plasmid libraries subassembly, v2]
GEO Series GSE245260. Escherichia coli. 42 samples. Type: Other.
Single-cell-resolved interspecies comparison shows a shared inflammatory axis and a dominant neutrophil-endothelial program in severe COVID-19
GEO Series GSE241133. Phodopus roborovskii. 15 samples. Type: Expression profiling by high throughput sequencing.
ETMR stem-like state and chemo-resistance are supported by perivascular cells at single-cell resolution (human organoids subset)
GEO Series GSE224476. Homo sapiens. 12 samples. Type: Expression profiling by high throughput sequencing.
Single-cell RNA-seq of total gallbladder/extrahepatic duct tissue digest from Pou2f3-/- and Pou2f3+/+, Pou2f3+/- mice
GEO Series GSE196546. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.