Find research datasets worth reusing
Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.
11,105
datasets available to search
ShareScore release 0.9.0
Dataset results
11,105 results for “single cells”
Designing a single cell RNA sequencing benchmark dataset to compare protocols and analysis methods
GEO Series GSE118767. Homo sapiens. 13 samples. Type: Expression profiling by high throughput sequencing.
Single-cell RNA-sequencing of human innate lymphoid cells (ILCs) and natural killer (NK) cells in the vascular and tissue compartment of the lung in MISTRG humanized mice
GEO Series GSE217706. Homo sapiens. 4 samples. Type: Expression profiling by high throughput sequencing.
Xenium Spatial Transcriptomics of Head and Neck Single Cell Carcinoma
GEO Series GSE300147. Homo sapiens. 18 samples. Type: Other.
Time series single-cell transcriptomic analysis of AEC2 directed differentiation
GEO Series GSE137811. Homo sapiens. 14 samples. Type: Expression profiling by high throughput sequencing.
Single cell analyses reveal the transient emergence of retinal progenitor cells in the ciliary margin zone during human retinal development [Spatial]
GEO Series GSE234035. Homo sapiens. 16 samples. Type: Other.
Single cell 3' RNA sequencing of Foreign body granuloma
GEO Series GSE203099. Mus musculus. 5 samples. Type: Expression profiling by high throughput sequencing.
single cell RNAseq identifies differential expressed genes upon SON overexpression in WT and Mettl3 cKO LSK cells
GEO Series GSE231863. Mus musculus. 4 samples. Type: Expression profiling by high throughput sequencing.
10X Genomics single-cell RNAseq combined with CRISPR tiling of Dot1l in mouse MLL-AF9 leukemia
GEO Series GSE174307. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing.
Ambient RNA analysis reveals misinterpreted and masked cell types in brain single-nuclei datasets
GEO Series GSE198951. Homo sapiens; Mus musculus. 4 samples. Type: Expression profiling by high throughput sequencing; Third-party reanalysis.
Single cell RNA-seq of mouse brain vascular transcriptomes
GEO Series GSE98816. Mus musculus. 3186 samples. Type: Expression profiling by high throughput sequencing.
Single cell RNA-sequencing on E17.5 mouse lungs and tracheas
GEO Series GSE157654. Mus musculus. 3 samples. Type: Expression profiling by high throughput sequencing.
Single-cell RNA-seq data of human glioma
GEO Series GSE167960. Homo sapiens. 6 samples. Type: Expression profiling by high throughput sequencing.
Maintenance of beta cell function in adolescent T1D subjects treated with a single dose of polyclonal expanded Treg is linked to lower ex vivo Treg expansion
GEO Series GSE243201. Homo sapiens. 12 samples. Type: Expression profiling by high throughput sequencing; Other.
single cell RNA-seq from Purkinje cell (ENCSR376KFF)
GEO Series GSE78381. Homo sapiens. 1 samples. Type: Expression profiling by high throughput sequencing.
FGF9 Promotes Mouse Spermatogonial Stem Cell Proliferation Mediated by p38 MAPK Signaling [single-cell RNA-seq]
GEO Series GSE160061. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing.
MultiK: An Automated Tool to Infer Optimal Cluster Numbers in Single-Cell RNA Sequencing Data
GEO Series GSE165336. Mus musculus. 1 samples. Type: Expression profiling by high throughput sequencing.
scATACseq Datasets Supporting Integrated Epigenetic and Transcriptional Single-Cell Analysis of t(11;14) Multiple Myeloma and Its BCL2 Dependency
GEO Series GSE199268. Homo sapiens. 24 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Single cell RNA-Seq from bone marrow Ewing patients
GEO Series GSE130020. Homo sapiens. 96 samples. Type: Expression profiling by high throughput sequencing.
single cell RNA-seq from Purkinje cell (ENCSR316RMA)
GEO Series GSE78366. Mus musculus. 1 samples. Type: Expression profiling by high throughput sequencing.
Single cell profiling of lichen planus identifies type I interferon response and potential therapeutic targeting
GEO Series GSE243940. Homo sapiens. 9 samples. Type: Expression profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.