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23,161 results for “; Lepidoptera”
Long-term trends in abundance of Lepidoptera larvae at Hubbard Brook Experimental Forest and three additional northern hardwood forest sites, 1986-2018 (Reformatted to the ecocomDP Design Pattern)
This data package is formatted as an ecocomDP (Ecological Community Data Pattern). For more information on ecocomDP see https://github.com/EDIorg/ecocomDP. This Level 1 data package was derived from the Level 0 data package found here: https://pasta.lternet.edu/package/metadata/eml/knb-lter-hbr/82/8. The abstract below was extracted from the Level 0 data package and is included for context: Numbers and lengths of Lepidoptera larvae (caterpillars, all species) were censused on shrub level foliage at biweekly intervals from late May/early June through late July/early August each year. Measurements were conducted on the Main bird plot in the Hubbard Brook Experimental Forest and on three additional plots within the White Mountain National Forest from 1986-1997.. These data were gathered as part of the Hubbard Brook Ecosystem Study (HBES). The HBES is a collaborative effort at the Hubbard Brook Experimental Forest, which is operated and maintained by the USDA Forest Service, Northern Research Station.
Long-term trends in abundance of Lepidoptera larvae at Hubbard Brook Experimental Forest and three additional northern hardwood forest sites, 1986-2022
Numbers and lengths of Lepidoptera larvae (caterpillars, all species) were censused on shrub level foliage at biweekly intervals from late May/early June through late July/early August each year. Measurements were conducted on the Main bird plot in the Hubbard Brook Experimental Forest and on three additional plots within the White Mountain National Forest from 1986-1997. These data were gathered as part of the Hubbard Brook Ecosystem Study (HBES). The HBES is a collaborative effort at the Hubbard Brook Experimental Forest, which is operated and maintained by the USDA Forest Service, Northern Research Station.
Speciation through chromosomal fusion and fission in Lepidoptera
<p>28 Mai 2020<br> Phylogenetic trees, the chromoSSE script and the input data for the chromoSSE models belonging to the publication "<strong>Speciation through chromosomal fusion and fission in <em>Lepidoptera" </em></strong>doi 10.1098/rstb.2019.0539. For more information, contact jurriaan.devos@unibas.ch or kay.lucek@unibas.ch.</p> <p>The zipped folder "trees" contains three posterior distributions of chronograms for each of 16 genera, based on a sample of 100 trees each.<br> Each tree includes the outgroup taxon, and the ingroup-outgroup split was dated based on one of three strategies:<br> - For the files named GENUS_tmax_pl.tre based on the reported maximum (oldest) age of the reported interval;<br> - For the files named GENUS_tmed_pl.tre based on the reported median age;<br> - For the files named GENUS_tmax_pl.tre based on the reported minimum (youngest) age of the reported interval.<br> Note that the outgroups were pruned prior to diversification rate analysis.<br> The median age files were used as input for the ChromoSSE analysis; all files were used an input for the analyses based on Brownian Motion.</p> <p>The file "chromoSSE.Rev" contains a script that runs the cromoSSE models.<br> Inorder to use this script RevBayes needs to be installed. This can be done by using the link: https://revbayes.github.io/download.<br> It can be run with the command line:<br> $> rb chromoSSE.Rev --args 1<br> As a argument every number between 1 and 16 can be used. And represent a genera:<br> 1 = Colias, 2 = Erebia, 3 = Eunica, 4 = Eurema, 5 = Heliconius, 6 = Ithomia, 7 = Lycaena,<br> 8 = Lysandra, 9 = Memphis, 10 = Morpho, 11 = Oleria, 12 = Papilio, 13 = Pieris,<br> 14 = Polyommatus, 15 = Pteronymia, 16 = Taygetis.<br> The process runs automatically and generates MCMC outputfiles and stores them in the directory "output".<br> Each tree that is analyzed returns three files:<br> -The files named "GENUS.ChromoSSE_anc_statesX.log" logfile of the states;<br> -The files named "GENUS.ChromoSSE_finalX.tree" tree output of the analysis;<br> -The files named "GENUS.ChromoSSE_modelX.log" logfile of the model.<br> The files can be easily accessed by using the software Tracer: https://beast.community/tracer</p> <p>The zipped folder "data" contains input files needed for the chromoSSE analysis.<br> To run each analysis a tree "GENUS.pruned.trees" and a tsv-file "GENUS.pruned.states.tsv" with the number of chromosomes per species is needed.<br> In the trees all species without a chromosom number were excluded.</p>
Endosymbiont mining from Lepidoptera genomics data
<p>Alignments and assembly files from the manuscript: 'One’s trash is someone else’s treasure: Sequence read archives from Lepidoptera genomes provide material for genome reconstruction of their endosymbionts'</p>
gbif-norway/dataset_uio_nhm_nef_lepidoptera: UiO NHM NEF Lepidoptera dataset v1.100
<p><strong>UiO NHM NEF Lepidoptera dataset v1.100 prepared for archiving</strong></p> <p>This dataset included compiled Norwegian Lepidoptera information (65 902 occurrences) by the Norwegian Entomological Society and was published in GBIF between 30 July 2012 and 6 December 2017. In December 2017 [head engineer Leif Aarvik](http://www.nhm.uio.no/om/organisasjon/forskning-samlinger/personer/laarvi/) requested the dataset to be retracted from GBIF because all data points have been migrated to the Museum Collection Database (MUSIT) for Entomology and is now published in GBIF as part of this dataset. Metadata for the Lepidoptera dataset will of course remain available in GBIF as a so-called "metadata-only" dataset.</p>
Lepidoptera genomics based on 88 chromosomal reference sequences informs population genetic parameters for conservation
<p>This repository contains (1) germline mutations called by the DeepVariant (v1.1.0) pipeline in VCF format; (2) rejected substitution scores calculated by the Genomic Evolutionary Rate Profiling (GERP++) software on each species and chromosome; and (3) the phylogenetic tree used as guide tree in the Cactus alignment.</p>
Long-term trends in abundance of Lepidoptera larvae at Hubbard Brook Experimental Forest and three additional northern hardwood forest sites, 1986-2018 (Reformatted to a Darwin Core Archive)
This data package is formatted as a Darwin Core Archive (DwC-A, event core). For more information on Darwin Core see https://www.tdwg.org/standards/dwc/. This Level 2 data package was derived from the Level 1 data package found here: https://pasta.lternet.edu/package/metadata/eml/edi/349/2, which was derived from the Level 0 data package found here: https://pasta.lternet.edu/package/metadata/eml/knb-lter-hbr/82/8. The abstract below was extracted from the Level 0 data package and is included for context: Numbers and lengths of Lepidoptera larvae (caterpillars, all species) were censused on shrub level foliage at biweekly intervals from late May/early June through late July/early August each year. Measurements were conducted on the Main bird plot in the Hubbard Brook Experimental Forest and on three additional plots within the White Mountain National Forest from 1986-1997.. These data were gathered as part of the Hubbard Brook Ecosystem Study (HBES). The HBES is a collaborative effort at the Hubbard Brook Experimental Forest, which is operated and maintained by the USDA Forest Service, Northern Research Station.
Figures 18–24. Bahamas Pterophoridae pinned adults. 18 in Additions to the plume moth fauna of The Bahamas (Lepidoptera: Pterophoridae) with description of four new species
Figures 18–24. Bahamas Pterophoridae pinned adults. 18) Hellinsia unicolor ♂, Abaco, 1.vi.2016. 19) Hellinsia bahamensis Matthews, new species, ♀, holotype, Grand Bahama Island, 27.x.2014. 20) Hellinsia lucayana Matthews, new species, ♂, holotype, Crooked Island, 8.vi.2015. 21) Adaina perplexus ♀, Long Island, 31.v–1. vi.2014. 22) Adaina thomae ♀, Crooked Island, 7.vi.2015. 23) Adaina simplicius ♂, Abaco, 30.x.2014. 24) Adaina ambrosiae ♀, Abaco, 3.vi.2016. Scale line below each name equals 1 mm.
Figure 2 in Fifty new genera of Hesperiidae (Lepidoptera)
Figure 2. Genomic trees of Eudaminae and representatives of other Hesperiidae subfamilies. The trees are built from protein-coding regions in different genomic partitions: a) Nuclear genome. b) Z chromosome. c) Mitochondrial genome; d) COI barcode. The trees are rooted with Pterourus glaucus (NVG-1670), not shown. See Table 1 and Table S1 in the Supplemental file deposited at https://osf.io/5cfht/?view_only=21eb53b6f8f344afaee3de2be90bf 5d2 for additional data about these specimens. Where possible, taxa are ordered similarly to that in the nuclear genome tree. Names of species placed in new genera described in this work are highlighted in yellow and clades of these genera are colored in red. Clades for genera where these species were placed previously are colored in blue and green arrow points from the former genus to the new genus (only on nuclear genome tree). Names of genera resurrected from synonymy are highlighted in cyan. Names of genera that form new genus-species combinations proposed in this work are highlighted in magenta. Statistical support values are shown by nodes in all but the COI barcode trees. COI barcode NJ dendrogram is given for comparison and is not expected to reflect phylogeny. The same notations are used in Fig. 2–13.
Figures 7–13 in Two new species and two new combinations in Saphenista Walsingham, 1914 from western North America (Lepidoptera: Tortricidae)
Figures 7–13. Genitalia of Saphenista. 7) Male of S. bartellae, USNM slide 150,181. 8) Male of S. powelli, USNM slide 153,767. 9) Male of S. latipunctana, MGP slide 349. 10) Male of S. dilutana, USNM slide 150,185. 11) Female of S. bartellae, USNM slide 150,182. 12) Female of S. powelli, USNM slide 153,565. 13) Female of S. latipunctana, EME slide 2762.
Figures 25–28. Bahamas Pterophoridae male genitalia. 25a in Additions to the plume moth fauna of The Bahamas (Lepidoptera: Pterophoridae) with description of four new species
Figures 25–28. Bahamas Pterophoridae male genitalia. 25a) Lioptilodes albistriolatus, slide DM 2159. 25b) phallus, same individual. 26a) Lantanophaga pusillidactylus, slide DM 2161. 26b) phallus, same individual. 27a) Postplatyptilia flinti, slide DM 2099. 27b) phallus, same individual. 28a) Stenoptilodes brevipennis, slide DM 2101. 28b) phallus, same individual.
Fig. 1 in Descriptions of two new Vietomartyria species (Lepidoptera, Micropterigidae) from China
Fig. 1. Adults and habitat of Vietomartyria spp. A. Vietomartyria wuyunjiena sp. nov., holotype, ♂. B. Vietomartyria maoershana sp. nov., holotype, ♂. C. One adult of V. wuyunjiena sp. nov. perching on fern. D. Habitat of V. wuyunjiena sp. nov. E. Specimen collection of V. wuyunjiena sp. nov. by sweep net. F. One adult of V. wuyunjiena sp. nov. perching on the white curtain of a light trap.
Fig. 4 in Descriptions of two new Vietomartyria species (Lepidoptera, Micropterigidae) from China
Fig. 4. Male genitalia of Vietomartyria maoershana sp. nov. A. Dorsal view, with phallus removed. B. Ditto, ventral view. C. Ditto, lateral view. D. Phallus, dorsal view. E. Ditto, ventral view. F. Ditto, lateral view.
Fig. 3 in Descriptions of two new Vietomartyria species (Lepidoptera, Micropterigidae) from China
Fig. 3. Male genitalia of Vietomartyria wuyunjiena sp. nov. A. Dorsal view, with phallus removed. B. Ditto, ventral view. C. Ditto, lateral view. D. Phallus, dorsal view. E. Ditto, ventral view. F. Ditto, lateral view.
Figure 16. Anthocharis thoosa thoosa and A in A review of three species-level taxa of the Anthocharis sara complex (Lepidoptera: Pieridae: Pierinae: Anthocharidini)
Figure 16. Anthocharis thoosa thoosa and A. julia sulfuris contact zone in Huntington Canyon, Emery County, Utah.
Figure 14 in A review of three species-level taxa of the Anthocharis sara complex (Lepidoptera: Pieridae: Pierinae: Anthocharidini)
Figure 14. (Left) Anthocharis julia sulfuris (as A. sara) male. (Right) Anthocharis julia sulfuris (as A. sara) female. Both were collected by Oscar Dorfman from South Willow Canyon, Tooele County, Utah.
Figure 13 in A review of three species-level taxa of the Anthocharis sara complex (Lepidoptera: Pieridae: Pierinae: Anthocharidini)
Figure 13. Possible hybrid of A. thoosa thoosa × A. julia sulfuris from Clear Creek Road; Raft River Range, Box Elder County, Utah.
Figure 11 in A review of three species-level taxa of the Anthocharis sara complex (Lepidoptera: Pieridae: Pierinae: Anthocharidini)
Figure 11. Clear Creek Road transect with GPS coordinates showing where adults of A. thoosa thoosa and A. julia sulfuris were sampled from the Raft River Range, Box Elder County, Utah.
Figure 8 in A review of three species-level taxa of the Anthocharis sara complex (Lepidoptera: Pieridae: Pierinae: Anthocharidini)
Figure 8. Top row: (Left) Second brood A. sara sara stray female collected from the Dead Mountains, San Bernardino County, CA, by Mark Walker and Brian Banker. (Right) Female A. thoosa reared from Christmas Tree Pass, Newberry Mts, Clark County, Nevada, 15 aerial miles to the north of where the Dead Mts. A. sara female was collected. Bottom row: (Left) Second brood female A. sara sara collected from Brand Park, Verdugo Mts., Glendale, Los Angeles County, CA, shown for comparison purposes. (Right) Female A. thoosa reared from Christmas Tree Pass, Newberry Mts, Clark County, Nevada.
Figure 5. Pupal cone curvature differences between Colorado A in A review of three species-level taxa of the Anthocharis sara complex (Lepidoptera: Pieridae: Pierinae: Anthocharidini)
Figure 5. Pupal cone curvature differences between Colorado A. julia prestonorum (Garfield County) and A. thoosa colorado (Montezuma County).
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Allen Brain Atlas
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OpenNeuro
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