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Appendix. List of the 28S and 16S rRNA sequences recovered from GenBank. 28S = 28S rRNA GenBank accession number; 16S = 16S rRNA GenBank accession number. in Genetic and morphological evidence for cryptic species in Macrobrachium australe and resurrection of M. ustulatum (Crustacea, Palaemonidae)
Appendix. List of the 28S and 16S rRNA sequences recovered from GenBank. 28S = 28S rRNA GenBank accession number; 16S = 16S rRNA GenBank accession number.
Fig. 27. Maximum likelihood tree from the concatenated data set with COI, 28S and 18S in Revision of the Merodon bombiformis group (Diptera: Syrphidae) - rare and endemic African hoverflies
Fig. 27. Maximum likelihood tree from the concatenated data set with COI, 28S and 18S rRNA gene sequences.
Fig. 2. Bayesian consensus tree generated from partial 28S in Relationships Of The Heteronchocleidids (Heteronchocleidus, Eutrianchoratus And Trianchoratus) As Inferred From Ribosomal Dna Nucleotide Sequence Data
Fig. 2. Bayesian consensus tree generated from partial 28S rDNA sequences (D1 domain) with Diplectanum spp. and Gyrodactylus spp. as outgroups. Values shown at each node refer to Bayesian (BI) posterior probabilities/maximum likelihood (ML) percentages of the bootstrap values with 100 replicates. Bootstrap values lower than 50 are given as dashes (-).
Fig. 7 in Ultrastructure and 28S rDNA Phylogeny of Two Gregarines: Cephaloidophora cf. communis and Heliospora cf. longissima with Remarks on Gregarine Morphology and Phylogenetic Analysis
Fig. 7. Relative rates of molecular evolution in long-branch apicomplexans: SSU rDNA (white columns) and LSU rDNA (black columns), calculated as ratio of the length of the current branch to average branch length of the non-long-branch apicomplexans (see the text for more explanations). Relative rates of LSU rDNA evolution are lower than those of SSU rDNA, especially in gregarines.
Fig. 2 in Ultrastructure and 28S rDNA Phylogeny of Two Gregarines: Cephaloidophora cf. communis and Heliospora cf. longissima with Remarks on Gregarine Morphology and Phylogenetic Analysis
Fig. 2. Light microscopy of the gregarine studied: free individuals (gamonts) of Cephaloidophora cf. communis (A, common light microsopy; B, DIC microscopy); a free gamont (C) and a syzygy (D) of Heliospora cf. longissima. Epimerite (ep), promerite (pr), deutomerite (de), septum between poto- and deutomerite (s1), and septum between proto- and epimerite (s2) are visible.
Fig. 1 in Ultrastructure and 28S rDNA Phylogeny of Two Gregarines: Cephaloidophora cf. communis and Heliospora cf. longissima with Remarks on Gregarine Morphology and Phylogenetic Analysis
Fig. 1. Layout of ribosomal operon fragment amplifications. Up- per part, schematic ribosomal operon with approximate positions of the direct and reverse primers used. Lower part, the amplified fragments of ribosomal DNA aligned with the ribosomal operon (above). Numbers indicate the length of the overlapping regions. Roman numerals denote the fragments discussed in this paper. SSU rDNA fragments analyzed previously by Rueckert et al. (2011b) have no numerical designations.
Fig. 5. Sequence variation among 4 28S in Population genetics of Oligonychus perseae (Acari: Tetranychidae) collected from avocados in Mexico and California
Fig. 5. Sequence variation among 4 28S genotypes identified from Oligonychus perseae populations in California, Mexico, and Costa Rica. Genotypes are named according to 3 genetic clusters identified from cytochrome oxidase subunit 1 (COI) haplotypes (see Fig. 2).
Fig. 5. Maximum likelihood tree for 28S in Fig. 1 in Fig. 4 in Identification of Sexually Dimorphic Genes in Pectoral Fin as Molecular Markers for Assessing the Sex of Japanese Silver Eels ().
Fig. 5. Maximum likelihood tree for 28S (A) and COX1 (B) genes. Red branches indicate the presence of tubercles on the RV margin.
Fig. 4. A maximum likelihood tree constructed from a 28S in New record of the cold freshwater dinoflagellate Palatinus apiculatus (Dinophyceae) from the Paldang Reservoir, Korea
Fig. 4. A maximum likelihood tree constructed from a 28S rDNA dataset of the Korean Palatinus apiculatus and other freshwater dinoflagellates. A total of 5,000 replicates were run for bootstrap analyses. Members of the genus Palatinus are highlighted in orange. The isolate from this study and its GenBank No. are given in bold font.
Fig. 14 Erythraeus regalis, larva. a in Towards resolving the double classification in Erythraeus (Actinotrichida: Erythraeidae): matching larvae with adults using 28S sequence data and experimental rearing
Fig. 14 Erythraeus regalis, larva. a Gnathosoma and idiosoma, dorsal view. b Dorsal opisthosomal seta. c Gnathosoma and idiosoma, ventral view
Fig. 11 Erythraeus cinereus, larva. a Leg I. b Leg II. c Leg III. d Tarsus I. e Tarsus II in Towards resolving the double classification in Erythraeus (Actinotrichida: Erythraeidae): matching larvae with adults using 28S sequence data and experimental rearing
Fig. 11 Erythraeus cinereus, larva. a Leg I. b Leg II. c Leg III. d Tarsus I. e Tarsus II (d, e, only specialized setae shown)
Fig. 9 Erythraeus cinereus, larva. a Chelicera. b in Towards resolving the double classification in Erythraeus (Actinotrichida: Erythraeidae): matching larvae with adults using 28S sequence data and experimental rearing
Fig. 9 Erythraeus cinereus, larva. a Chelicera. b Gnathosoma (and scutum), dorsal view. c Gnathosoma, ventral view. d Palp tibia. e Palp tarsus
Fig. 8 Erythraeus cinereus, adult. a Palp, medial view. b Crista metopica and eyes. c Dorsal opisthosomal setae. d in Towards resolving the double classification in Erythraeus (Actinotrichida: Erythraeidae): matching larvae with adults using 28S sequence data and experimental rearing
Fig. 8 Erythraeus cinereus, adult. a Palp, medial view. b Crista metopica and eyes. c Dorsal opisthosomal setae. d Serratala on genu I. e Serratala on genu IV. f Diversity of serratalae and setae of non-serratalae type on telofemora, genua, and tibiae of legs I–IV
Fig. 6 Erythraeus phalangoides, larva. a in Towards resolving the double classification in Erythraeus (Actinotrichida: Erythraeidae): matching larvae with adults using 28S sequence data and experimental rearing
Fig. 6 Erythraeus phalangoides, larva. a Gnathosoma and idiosoma, dorsal view. b Dorsal opisthosomal setae. c Gnathosoma and idiosoma, ventral view. d Seta ps
Fig. 10 Erythraeus cinereus, larva. a in Towards resolving the double classification in Erythraeus (Actinotrichida: Erythraeidae): matching larvae with adults using 28S sequence data and experimental rearing
Fig. 10 Erythraeus cinereus, larva. a Gnathosoma and idiosoma, dorsal view. b Dorsal opisthosomal setae. c Gnathosoma and idiosoma, ventral view. d Seta ps
Fig. 12 Erythraeus regalis, adult. a Palp, medial view. b Crista metopica and eyes. c Dorsal opisthosomal setae. d in Towards resolving the double classification in Erythraeus (Actinotrichida: Erythraeidae): matching larvae with adults using 28S sequence data and experimental rearing
Fig. 12 Erythraeus regalis, adult. a Palp, medial view. b Crista metopica and eyes. c Dorsal opisthosomal setae. d Serratala on genu I. e Serratala on genu IV. f Diversity of serratalae and setae of non-serratalae type on telofemora, genua, and tibiae of legs I–IV
Fig. 16 Erythraeus regalis, larva. a Leg I. b Leg II. c Leg III. d Genu-tarsus I. e Genu-tarsus II in Towards resolving the double classification in Erythraeus (Actinotrichida: Erythraeidae): matching larvae with adults using 28S sequence data and experimental rearing
Fig. 16 Erythraeus regalis, larva. a Leg I. b Leg II. c Leg III. d Genu-tarsus I. e Genu-tarsus II. Tibia-tarsus III (d–f, only specialized setae shown)
Fig. 7 Erythraeus phalangoides, larva. a Leg I. b Leg II. c Leg III. d Tarsus I. e Tarsus II. f in Towards resolving the double classification in Erythraeus (Actinotrichida: Erythraeidae): matching larvae with adults using 28S sequence data and experimental rearing
Fig. 7 Erythraeus phalangoides, larva. a Leg I. b Leg II. c Leg III. d Tarsus I. e Tarsus II. f Tarsus III (d–f, only specialized setae shown)
Fig. 5 Erythraeus phalangoides, larva. a in Towards resolving the double classification in Erythraeus (Actinotrichida: Erythraeidae): matching larvae with adults using 28S sequence data and experimental rearing
Fig. 5 Erythraeus phalangoides, larva. a Gnathosoma (and scutum), dorsal view. b Odontus. c Gnathosoma, ventral view. d Palp tarsus
Fig. 3. Maximum likelihood tree generated using 28S in Morphological and molecular description of Pallisentis roparensis n. sp. (Acanthocephala: Quadrigyridae) infecting the freshwater cat fish Wallago attu from Ropar Wetland, Punjab, India
Fig. 3. Maximum likelihood tree generated using 28S rRNA gene sequence of Pallisentis roparensis and the sequences of related taxa downloaded from GenBank. Numbers near internal nodes show ML bootstrap clade frequencies.
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