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175 results for “ATACSeq”
ATACSeq fastq files associated with the manuscript entitled 'Interspecies transcriptome analyses identify genes that control the development and evolution of limb skeletal proportion'
<p>This next-generation sequencing dataset is associated with the research manuscript entitled ‘<em>Interspecies transcriptome analyses identify genes that control the development and evolution of limb skeletal proportion</em>’ (https://www.biorxiv.org/content/10.1101/754002v2).</p> <p>The zipped folder ‘<strong>Zenodo_Saxena_etal_2021_ATACSeq_FastqFiles</strong>’ contains raw/unprocessed ATACSeq Fatsq read files for postnatal day 5 (P5) mouse (Mus) and jerboa (Jac) cartilage samples (Metatarsal = MT; Radius/Ulna = RU).</p> <p>> The <strong>Jac_P5</strong> subfolder contains paired-end reads (R1 and R2) for three jerboa metatarsals (MT1-3) and radius/ulna (RU1-3) biological replicates.</p> <p>> The <strong>Mus_P5</strong> subfolder contains paired-end reads (R1 and R2) for two mouse metatarsals (MT1-2) and radius/ulna (RU1-2) biological replicates.</p>
ATACseq fastq files_1
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ATACseq fastq files_2
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Sex-specific control of human heart maturation by the progesterone receptor [bulk_ATACseq_human]
GEO Series GSE156704. Homo sapiens. 27 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
ATAC-seq time course (in parallel to mRNA-seq time course), of wildtype C. elegans larvae sampled from 14h to 30h at 25oC [ATACseq_N2]
GEO Series GSE288867. Caenorhabditis elegans. 34 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Effects of mechanical stretch and depletion of lamin A/C on chromatin accessibility in human myotubes (ATACseq)
GEO Series GSE288984. Homo sapiens. 14 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Impact of c-JUN deficiency on thalamus development in mice and human neural models [ATACseq, RNAseq, CUT&Tag]
GEO Series GSE260732. Homo sapiens. 23 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
Divergent regulatory element programs steer sex-specific supporting cell differentiation along mouse gonadal development [ATACseq]
GEO Series GSE277646. Mus musculus. 24 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
An epigenetic program established by gene – environment interactions initiates pancreatic carcinogenesis [ATACSeq_rIL33]
GEO Series GSE162367. Mus musculus. 6 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
ATACseq to determine chromatin accessibility in activated or Tfr-suppressed B cells
GEO Series GSE82001. Mus musculus. 4 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
An Integrated Epigenomic and Transcriptomic Map of Mouse and Human ab T Cell Development (Population ATACseq)
GEO Series GSE148975. Mus musculus. 7 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
ATACseq of kdrl-GFP+ endothelial cells in 28hpf zebrafish embryos
GEO Series GSE143763. Danio rerio. 7 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Kinase-independent activity of DYRK1A promotes viral entry of highly pathogenic human coronaviruses [ATACseq]
GEO Series GSE213997. Chlorocebus sabaeus. 6 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Single-cell ATACseq analysis of bone marrow stromal cells of young bones [Prrx1cre_P21_ATAC]
GEO Series GSE185791. Mus musculus. 1 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
ATACseq of CD34+ HPCs with viral overexpression of GATA3, TCF1 or BCL11B
GEO Series GSE151076. Homo sapiens. 16 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
The PTPN2/N1 inhibitor ABBV-CLS-484 unleashes potent anti-tumour immunity [TIL_ATACseq]
GEO Series GSE237376. Mus musculus. 12 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Cell type specific ATACseq (Crosslinked and TF-Sorted ATAC-seq (CaTS-ATAC)) reveals two distinct cis regulatory strategies for Shh interpretation in the mouse ventral neural tube
GEO Series GSE204690. Mus musculus. 67 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
ATACseq of 11 subsets of human postnatal developing thymocytes
GEO Series GSE151075. Homo sapiens. 23 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Age and cell type specific specific effects of histone variant H2BE in the brain [ATACSeq]
GEO Series GSE282469. Mus musculus. 1 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
ATACseq measurements during cord blood-derived human erythropoiesis
GEO Series GSE137446. Homo sapiens. 7 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
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Allen Brain Atlas
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DANDI Archive for NWB datasets
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International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.