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1,176 results for “Acquisition”
PsPM-REW2: SCR, ECG, respiration, and eyetracking measurements in a Pavlovian appetitive conditioning task with juice delivery with acquisition and recall test after one week
<p>This dataset contains skin conductance responses (SCR), electrocardyogram (ECG), respiration, pupil size (PSR), and gaze coordinates measurements for 34 healthy unmedicated participants (20 females and 14 males aged 24.9 +/- 4.1) participating in a Pavlovian differential cued rewarding conditioning experiment with 2 sessions. <br>CSs were isoluminant colored triangles presented on the screen center with grey background.<br>US was a sip of the favourite juice selected individually. SOA between the CS onset and US was 5.5 s. Participants underwent the conditioning task with CSs (CS+ 50% reinforced) and US delivery in session 1 with 2 blocks, and were tested in a retention/extinction task one week later in session 2 with 2 blocks. No US was delivered during session 2. The ITI was jittered on each trial uniformly at random between 9 to 16 s. The blocks in each session were recorded on the same day with self-paced breaks.</p>
PsPM-REW1: SCR, ECG, respiration, and eyetracking measurements in a Pavlovian appetitive conditioning task with juice delivery with acquisition and recall test after one week
<p>This dataset contains skin conductance responses (SCR), electrocardyogram (ECG), respiration, pupil size (PSR), and gaze coordinates measurements for 37 healthy unmedicated participants (26 females and 11 males aged 24.2 +/- 4.2) participating in a Pavlovian differential cued rewarding conditioning experiment with 2 sessions. <br>CSs were isoluminant colored triangles presented on the screen center with grey background.<br>US was a sip of the favourite juice selected individually. SOA between the CS onset and US was 5.5 s. Participants underwent the conditioning task with CSs (CS+ 50% reinforced) and US delivery in session 1 with 2 blocks, and were tested in a retention/extinction task one week later in session 2 with 2 blocks. No US was delivered during session 2. The ITI was jittered on each trial uniformly at random between 9 to 16 s. The blocks in each session were recorded on the same day with self-paced breaks.</p>
Effects of Long-Term Soil Warming on Microbial Yield, Acquisition, and Stress Traits at Harvard Forest 2014
Soil microbial traits drive ecosystem functions. This relationship can explain why microbial functional diversity is typically positively correlated with ecosystem function. However, microbial adaptation to climate change related warming stress can shift microbial traits with direct implications for carbon cycling in the soil. Here, we investigated how long-term warming affects the relationship between microbial trait diversity and ecosystem function. Soils were sampled after 24 years of +5\degree C warming alongside unheated control soils from the Harvard Forest Long-Term Ecological Research site. Ecosystem function was estimated from six different enzyme activities and microbial biomass. This data was coupled with metatranscriptomics sequencing, where reads were assigned to yield, acquisition, or stress trait categories. We found that in organic horizon soils, warming decreased the richness of acquisition-related traits. In the mineral soils, we observed that heated soils exhibited a negative relationship with the richness of acquisition related traits. These results suggest that the microbial communities exposed to long-term warming is shifting away from a resource acquisition life history strategy.
A multi-modal human neuroimaging dataset for data integration: simultaneous EEG and fMRI acquisition during a motor imagery neurofeedback task: XP1
Open the record for dataset details and reuse information.
MASiVar: Multisite, Multiscanner, and Multisubject Acquisitions for Studying Variability in Diffusion Weighted Magnetic Resonance Imaging
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Example Microscopy Metadata JSON files produced using Micro-Meta App to document the acquisition of example images using a custom-built TIRF Epifluorescence Structured Illumination Microscope
<p><strong>Example Microscopy Metadata JSON files produced using the <a href="https://wu-bimac.github.io/MicroMetaApp.github.io/">Micro-Meta App</a> documenting an example raw-image file acquired using the custom-built TIRF Epifluorescence Structured Illumination Microscope.</strong></p> <p>For this use case, which is presented in Figure 5 of <a href="http://doi: https://doi.org/10.1101/2021.05.31.446382">Rigano et al., 2021</a>, Micro-Meta App was utilized to document:</p> <p>1) The <strong>Hardware Specifications</strong> of the custom build TIRF Epifluorescence Structured light Microscope (TESM; <a href="https://www.pnas.org/content/109/8/E471.long">Navaroli et al., 2010</a>) developed, built on the basis of the based on Olympus IX71 microscope stand, and owned by the Biomedical Imaging Group (http://big.umassmed.edu/) at the Program in Molecular Medicine of the University of Massachusetts Medical School. Because TESM was custom-built the most appropriate documentation level is <strong>Tier 3</strong> (<em>Manufacturing/Technical Development/Full Documentation</em>) as specified by the <a href="https://doi.org/10.5281/zenodo.4710731">4DN-BINA-OME</a> Microscopy Metadata model (<a href="https://doi.org/10.1101/2021.04.25.441198">Hammer et al., 2021</a>).</p> <p>The TESM Hardware Specifications are stored in: <strong>Rigano et al._Figure 5_UseCase_Biomedical Imaging Group_TESM.JSON</strong></p> <p>2) The <strong>Image Acquisition Settings</strong> that were applied to the TESM microscope for the acquisition of an example image (FSWT-6hVirus-10minFIX-stk_4-EPI.tif.ome.tif) obtained by Nicholas Vecchietti and Caterina Strambio-De-Castillia. For this image, TZM-bl human cells were infected with HIV-1 retroviral three-part vector (FSWT+PAX2+pMD2.G). Six hours post-infection cells were fixed for 10 min with 1% formaldehyde in PBS, and permeabilized. Cells were stained with mouse anti-p24 primary antibody followed by DyLight488-anti-Mouse secondary antibody, to detect HIV-1 viral Capsid. In addition, cells were counterstained using rabbit anti-Lamin B1 primary antibody followed by DyLight649-anti-Rabbit secondary antibody, to visualize the nuclear envelope and with DAPI to visualize the nuclear chromosomal DNA.</p> <p>The Image Acquisition Settings used to acquire the FSWT-6hVirus-10minFIX-stk_4-EPI.tif.ome.tif image are stored in: <strong>Rigano et al._Figure 5_UseCase_AS_fswt-6hvirus-10minfix-stk_4-epi.tif.JSON</strong></p> <p><em><strong>Instructional video tutorials on how to use these example data files:</strong></em><br> Use these videos to get started with using Micro-Meta App after downloading the example data files available here.</p> <ul> <li><a href="https://vimeo.com/562022222">Part 1/2</a></li> <li><a href="https://vimeo.com/562022281">Part 2/2</a></li> </ul>
SBC LTER: Meteorological and sea surface data from the R/V Pt. Sur Underway Data Acquisition System (UDAS) in the Santa Barbara Channel: LTER01, 2001-03-20 to 2001-03-26
The data described here were collected on LTER01 which took place from 2001-03-20 to 2001-03-26 on the RV Pt. Sur. Cruises have been conducted in the Santa Barbara Channel, California, USA, 3-4 times per year since March, 2001 and are approximately 7 days in length. There are 2 basic types of measurements: Underway measurements: fluorometry, salinity and temperature are collected at a depth of 3m with a flow-through system which also includes continuous atmospheric climate measurements. Underway acoustic dopler current profiles were collected using a NB 150kHz ADCP.
SBC LTER: Meteorological and sea surface data from the R/V Pt. Sur Underway Data Acquisition System (UDAS) in the Santa Barbara Channel: LTER02, 2001-09-07 to 2001-09-15
The data described here were collected on LTER02 which took place from 2001-09-07 to 2001-09-15 on the RV Pt. Sur. Cruises have been conducted in the Santa Barbara Channel, California, USA, 3-4 times per year since March, 2001 and are approximately 7 days in length. There are 2 basic types of measurements: Underway measurements: fluorometry, salinity and temperature are collected at a depth of 3m with a flow-through system which also includes continuous atmospheric climate measurements. Underway acoustic dopler current profiles were collected using a NB 150kHz ADCP.
SBC LTER: Meteorological and sea surface data from the R/V Pt. Sur Underway Data Acquisition System (UDAS) in the Santa Barbara Channel: LTER03, 2002-02-18 to 2002-02-27
The data described here were collected on LTER03 which took place from 2002-02-18 to 2002-02-27 on the RV Pt. Sur. Cruises have been conducted in the Santa Barbara Channel, California, USA, 3-4 times per year since March, 2001 and are approximately 7 days in length. There are 2 basic types of measurements: Underway measurements: fluorometry, salinity and temperature are collected at a depth of 3m with a flow-through system which also includes continuous atmospheric climate measurements. Underway acoustic dopler current profiles were collected using a NB 150kHz ADCP.
SBC LTER: Meteorological and sea surface data from the R/V Pt. Sur Underway Data Acquisition System (UDAS) in the Santa Barbara Channel: LTER04, 2002-04-24 to 2002-05-03
The data described here were collected on LTER04 which took place from 2002-04-24 to 2002-05-03 on the RV Pt. Sur. Cruises have been conducted in the Santa Barbara Channel, California, USA, 3-4 times per year since March, 2001 and are approximately 7 days in length. There are 2 basic types of measurements: Underway measurements: fluorometry, salinity and temperature are collected at a depth of 3m with a flow-through system which also includes continuous atmospheric climate measurements. Underway acoustic dopler current profiles were collected using a NB 150kHz ADCP.
SBC LTER: Meteorological and sea surface data from the R/V Pt. Sur Underway Data Acquisition System (UDAS) in the Santa Barbara Channel: LTER05, 2002-09-03 to 2002-09-12
The data described here were collected on LTER05 which took place from 2002-09-03 to 2002-09-12 on the RV Pt. Sur. Cruises have been conducted in the Santa Barbara Channel, California, USA, 3-4 times per year since March, 2001 and are approximately 7 days in length. There are 2 basic types of measurements: Underway measurements: fluorometry, salinity and temperature are collected at a depth of 3m with a flow-through system which also includes continuous atmospheric climate measurements. Underway acoustic dopler current profiles were collected using a NB 150kHz ADCP.
SBC LTER: Meteorological and sea surface data from the R/V Pt. Sur Underway Data Acquisition System (UDAS) in the Santa Barbara Channel: LTER06, 2003-02-25 to 2003-03-06
The data described here were collected on LTER06 which took place from 2003-02-25 to 2003-03-06 on the RV Pt. Sur. Cruises have been conducted in the Santa Barbara Channel, California, USA, 3-4 times per year since March, 2001 and are approximately 7 days in length. There are 2 basic types of measurements: Underway measurements: fluorometry, salinity and temperature are collected at a depth of 3m with a flow-through system which also includes continuous atmospheric climate measurements. Underway acoustic dopler current profiles were collected using a NB 150kHz ADCP.
SBC LTER: Meteorological and sea surface data from the R/V Pt. Sur Underway Data Acquisition System (UDAS) in the Santa Barbara Channel: LTER07, 2003-05-14 to 2003-05-23
The data described here were collected on LTER07 which took place from 2003-05-14 to 2003-05-23 on the RV Pt. Sur. Cruises have been conducted in the Santa Barbara Channel, California, USA, 3-4 times per year since March, 2001 and are approximately 7 days in length. There are 2 basic types of measurements: Underway measurements: fluorometry, salinity and temperature are collected at a depth of 3m with a flow-through system which also includes continuous atmospheric climate measurements. Underway acoustic dopler current profiles were collected using a NB 150kHz ADCP.
SBC LTER: Meteorological and sea surface data from the R/V Pt. Sur Underway Data Acquisition System (UDAS) in the Santa Barbara Channel: LTER08, 2003-10-08 to 2003-10-17
The data described here were collected on LTER08 which took place from 2003-10-08 to 2003-10-17 on the RV Pt. Sur. Cruises have been conducted in the Santa Barbara Channel, California, USA, 3-4 times per year since March, 2001 and are approximately 7 days in length. There are 2 basic types of measurements: Underway measurements: fluorometry, salinity and temperature are collected at a depth of 3m with a flow-through system which also includes continuous atmospheric climate measurements. Underway acoustic dopler current profiles were collected using a NB 150kHz ADCP.
SBC LTER: Meteorological and sea surface data from the R/V Pt. Sur Underway Data Acquisition System (UDAS) in the Santa Barbara Channel: LTER09, 2004-02-24 to 2004-03-04
The data described here were collected on LTER09 which took place from 2004-02-24 to 2004-03-04 on the RV Pt. Sur. Cruises have been conducted in the Santa Barbara Channel, California, USA, 3-4 times per year since March, 2001 and are approximately 7 days in length. There are 2 basic types of measurements: Underway measurements: fluorometry, salinity and temperature are collected at a depth of 3m with a flow-through system which also includes continuous atmospheric climate measurements. Underway acoustic doppler current profiles were collected using a RDInstruments Workhorse 300kHz ADCP.
SBC LTER: Meteorological and sea surface data from the R/V Pt. Sur Underway Data Acquisition System (UDAS) in the Santa Barbara Channel: LTER10, 2004-05-06 to 2004-05-13
The data described here were collected on LTER10 which took place from 2004-05-06 to 2004-05-13 on the RV Pt. Sur. Cruises have been conducted in the Santa Barbara Channel, California, USA, 3-4 times per year since March, 2001 and are approximately 7 days in length. There are 2 basic types of measurements: Underway measurements: fluorometry, salinity and temperature are collected at a depth of 3m with a flow-through system which also includes continuous atmospheric climate measurements. Underway acoustic doppler current profiles were collected using a RDInstruments Workhorse 300kHz ADCP.
SBC LTER: Meteorological and sea surface data from the R/V Pt. Sur Underway Data Acquisition System (UDAS) in the Santa Barbara Channel: LTER11, 2004-09-08 to 2004-09-16
The data described here were collected on LTER11 which took place from 2004-09-08 to 2004-09-16 on the RV Pt. Sur. Cruises have been conducted in the Santa Barbara Channel, California, USA, 3-4 times per year since March, 2001 and are approximately 7 days in length. There are 2 basic types of measurements: Underway measurements: fluorometry, salinity and temperature are collected at a depth of 3m with a flow-through system which also includes continuous atmospheric climate measurements. Underway acoustic doppler current profiles were collected using a RDInstruments Workhorse 300kHz and RDInstruments Ocean Surveyor 75kHz ADCP.
SBC LTER: Meteorological and sea surface data from the R/V Pt. Sur Underway Data Acquisition System (UDAS) in the Santa Barbara Channel: LTER12, 2005-01-20 to 2005-01-27
The data described here were collected on LTER12 which took place from 2005-01-20 to 2005-01-27 on the RV Pt. Sur. Cruises have been conducted in the Santa Barbara Channel, California, USA, 3-4 times per year since March, 2001 and are approximately 7 days in length. There are 2 basic types of measurements: Underway measurements: fluorometry, salinity and temperature are collected at a depth of 3m with a flow-through system which also includes continuous atmospheric climate measurements. Underway acoustic doppler current profiles were collected using a RDInstruments Workhorse 300kHz and RDInstruments Ocean Surveyor 75kHz ADCP.
SBC LTER: Meteorological and sea surface data from the R/V Pt. Sur Underway Data Acquisition System (UDAS) in the Santa Barbara Channel: LTER13, 2005-04-23 to 2005-04-30
The data described here were collected on LTER13 which took place from 2005-04-23 to 2005-04-30 on the RV Pt. Sur. Cruises have been conducted in the Santa Barbara Channel, California, USA, 3-4 times per year since March, 2001 and are approximately 7 days in length. There are 2 basic types of measurements: Underway measurements: fluorometry, salinity and temperature are collected at a depth of 3m with a flow-through system which also includes continuous atmospheric climate measurements. Underway acoustic doppler current profiles were collected using a RDInstruments Workhorse 300kHz ADCP.
SBC LTER: Meteorological and sea surface data from the R/V Pt. Sur Underway Data Acquisition System (UDAS) in the Santa Barbara Channel: LTER14, 2005-10-07 to 2005-10-14
The data described here were collected on LTER14 which took place from 2005-10-07 to 2005-10-14 on the RV Pt. Sur. Cruises have been conducted in the Santa Barbara Channel, California, USA, 3-4 times per year since March, 2001 and are approximately 7 days in length. There are 2 basic types of measurements: Underway measurements: fluorometry, salinity and temperature are collected at a depth of 3m with a flow-through system which also includes continuous atmospheric climate measurements. Underway acoustic doppler current profiles were collected using a RDInstruments Workhorse 300kHz and RDInstruments Ocean Surveyor 75kHz ADCP.
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.