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11 results for “Aggregatibacter actinomycetemcomitans”
Computationally modelled structure of type IV pilus PilA of Aggregatibacter actinomycetemcomitans
<p>Some bacterial type IV pili structures have been determined with Cryo-EM, X-ray diffraction or similar method. The type IVa pilus PilA of <em>Aggregatibacter actinomycetemcomitans</em>, an oral pathogen, shares sequence identity with other bacterial type IVa pili. To understand the structure of AaPilA at the molecular level, we performed computational modeling studies. To model the filament, we utilized the GalaxyGemini web server using different monomer conformations from molecular dynamics simulations as a seed; then, we extended the structure to 14-mer by employing the cryo-EM map file of type IV pilus from enterohemorrhagic <em>E. coli</em>. The structures were predicted for a full-length monomer PilA_D7S, N-terminally truncated monomer PilA_D7S_Δ1-27 and 14-homo-oligomer PilA_D7S_14mer. PilAD7S_Δ1-27 and PilAD7S share the same secondary structural elements: an N-terminal α-helix, four antiparallel β-strands, a hypervariable segment and a flexible C-terminus. The homo-oligomeric PilAD7S from our computational model resembles the interface seen in the cryo-EM structure of <em>N. meningitidis</em> type IV pili.</p>
Computationally modelled structure of type IV pilus PilA of Aggregatibacter actinomycetemcomitans
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Effect of infection with Aggregatibacter actinomycetemcomitans or Porphyromonas gingivalis on primary murine bone marrow-derived dendritic cells
GEO Series GSE41383. Mus musculus. 9 samples. Type: Expression profiling by array.
Transcriptome analysis of Aggregatibacter actinomycetemcomitans strains isolated from the same individual during short term persistent infections using a pan-genome microarray
GEO Series GSE43074. Aggregatibacter actinomycetemcomitans. 16 samples. Type: Expression profiling by array.
Transcriptome analysis of Aggregatibacter actinomycetemcomitans serotype b strains of JP2 and non-JP2 genotypes using a pan-genome microarray
GEO Series GSE38943. Aggregatibacter actinomycetemcomitans. 10 samples. Type: Expression profiling by array.
Comparative genomic analysis of Aggregatibacter actinomycetemcomitans strains during short term persistent infections using a pan-genome microarray
GEO Series GSE42953. Aggregatibacter actinomycetemcomitans. 16 samples. Type: Genome variation profiling by array.
Comparative genomic analysis of Aggregatibacter actinomycetemcomitans of JP2 and non-JP2 genotypes using a pan-genome microarray
GEO Series GSE39143. Aggregatibacter actinomycetemcomitans. 38 samples. Type: Genome variation profiling by array.
Effect of Catecholamines on the Dental Pathogen Aggregatibacter actinomycetemcomitans
GEO Series GSE68749. Aggregatibacter actinomycetemcomitans. 9 samples. Type: Expression profiling by array.
Trees and Roary output for Adaptation by ancient horizontal acquisition of butyrate metabolism genes in Aggregatibacter actinomycetemcomitans
<p>Supporting data for publication. </p> <ol> <li>Raw Trees for Figure 1 and supplementary figures 2 and 3.</li> <li>Roary presence absence output.</li> </ol>
Polymorphonuclear Cells' Sensitivity to Aggregatibacter Actinomycetemcomitans Bacteria in Patients With Aggressive Periodontitis
ClinicalTrials.gov study NCT02010307. IPD Sharing: Not stated. Countries: 1. Publications: 0.
Crosstalk between Streptococcus mutans and Aggregatibacter actinomycetemcomitans in dual-species biofilms.
GEO Series GSE75019. Streptococcus mutans; Aggregatibacter actinomycetemcomitans. 20 samples. Type: Expression profiling by high throughput sequencing.
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