Find research datasets worth reusing
Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.
7
datasets available to search
ShareScore release 0.9.0
Dataset results
7 results for “Angiosperms353”
Data from: Exploring the potential of Angiosperms353 markers for species identification of Eastern Mediterranean orchids
Open the record for dataset details and reuse information.
A nuclear phylogenomic study of the angiosperm order Myrtales, exploring the potential and limitations of the universal Angiosperms353 probe set
<p>The premise of this study is to further advance the understanding of the species-rich, economically and ecologically important Myrtales, an angiosperm order in the rosid clade comprising nine families, approximately 400 genera and almost 14000 species occurring on all continents (except Antarctica). The potential of High Throughput Sequencing (HTS) and target enrichment with the Angiosperms353 probe kit is evaluated on a sample of 485 species in 305 genera (76% of all genera in the order). Results provide technical considerations for processing HTS data and the most comprehensive phylogenetic hypothesis for the order to date. Relationships at all ranks such as the relationship of the early diverging families, often reflect previous studies, but gene conflict is evident, and relationships previously found to be uncertain often remain so. HTS and the Angiosperms353 probe kit are powerful tools for phylogenomic analysis, but better understanding of the genetic data available is required to enable selection of genes and gene trees that account for incomplete lineage sorting and hybridisation events. </p>
Phylogenomics of Boraginaceae using lineage-specific and angiosperms353 loci
Open the record for dataset details and reuse information.
Angiosperms353 data for the epidendroid orchid base
Open the record for dataset details and reuse information.
Are Palmer's elm-leaf goldenrod and the smooth elm-leaf goldenrod real? The Angiosperms353 kit provides within-species signal in Solidago ulmifolia s.l.
<p><b><i>Abstract </i>— </b>The genus <i>Solidago</i> represents a taxonomically challenging group due to its sheer number of species, putative hybridization, polyploidy, and shallow genetic divergence among species. Here we use a dataset obtained exclusively from herbarium specimens to evaluate the status of <i>Solidago ulmifolia</i> var. <i>palmeri</i>, a morphologically subtle taxon potentially confined to Alabama, Arkansas, Mississippi, and Missouri. A multivariate analysis of both discrete and continuous morphological data revealed no clear distinction between <i>S. ulmifolia</i> var. <i>palmeri</i> and <i>Solidago ulmifolia</i> var. <i>ulmifolia</i>. <i>Solidago ulmifolia</i> var. <i>palmeri</i>'s status was also assessed with a phylogenomic and SNP clustering analysis of data generated with the "Angiosperms353" probe kit. Neither analysis supported <i>Solidago ulmifolia</i> var. <i>palmeri</i> as a distinct taxon, and we suggest that this name should be discarded. The status of <i>Solidago delicatula</i> (formerly known as <i>Solidago ulmifolia</i> var. <i>microphylla</i>) was also assessed. Both morphological and phylogenetic analyses supported the species status of <i>S. delicatula</i> and we suggest maintaining this species at its current rank. These results highlight the utility of the Angiosperms353 probe kit, both with herbarium tissue and at lower taxonomic levels. Indeed, this is the first study to utilize this kit to identify genetic groups within a species.</p>
On the potential of Angiosperms353 for population genomics studies
Open the record for dataset details and reuse information.
Are Palmer’s elm-leaf goldenrod and the smooth elm-leaf goldenrod real? The Angiosperms353 kit provides within-species signal in Solidago ulmifolia s.l.
Open the record for dataset details and reuse information.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.