Find research datasets worth reusing
Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.
10
datasets available to search
ShareScore release 0.9.0
Dataset results
10 results for “Animal phylogeny”
Fig. 3 in Application Of Dna Barcoding In Taxonomy And Phylogeny: An Individual Case Of Coi Partial Gene Sequencing From Seven Animal Species
Fig. 3. Phylogenetic position of Macrobiotus sp., Bayesian inference phylogenetic tree. Sequences obtained by us are written in bold.
Fig. 1 in Application Of Dna Barcoding In Taxonomy And Phylogeny: An Individual Case Of Coi Partial Gene Sequencing From Seven Animal Species
Fig. 1. Phylogenetic position of D. lindholmi and L. a. exigua, Bayesian inference phylogenetic tree. Sequences obtained by us are written in bold.
Comparative whole genome phylogeny of animal, environmental and human strains confirms the genogroups organization and the diversity of Stenotrophomonas maltophilia
<p>Reannotation of Smc genomes from Refseq (Prokka v1.13) and gene presence and absence spreadsheet from Roary.</p>
Data from: Novel predators reshape holozoan phylogeny and reveal the presence of a two-component signalling system in the ancestor of animals
Our understanding of the origin of animals has been transformed by characterizing their most closely related, unicellular sisters: the choanoflagellates, filastereans, and ichthyosporeans. Together with animals, these lineages make up the Holozoa [ 1, 2 ]. Many traits previously considered "animal specific" were subsequently found in other holozoans [ 3, 4 ], showing that they evolved before animals, although exactly when is currently uncertain because several key relationships remain unresolved [ 2, 5 ]. Here we report the morphology and transcriptome sequencing from three novel unicellular holozoans: Pigoraptor vietnamica and Pigoraptor chileana, which are related to filastereans, and Syssomonas multiformis, which forms a new lineage with Corallochytrium in phylogenomic analyses. All three species are predatory flagellates that feed on large eukaryotic prey, and all three also appear to exhibit complex life histories with several distinct stages, including multicellular clusters. Examination of genes associated with multicellularity in animals showed that the new filastereans contain a cell-adhesion gene repertoire similar to those of other species in this group. Syssomonas multiformis possessed a smaller complement overall but does encode genes absent from the earlier-branching ichthyosporeans. Analysis of the T-box transcription factor domain showed expansion of T-box transcription factors based on combination with a non-T-box domain (a receiver domain), which has not been described outside of vertebrates. This domain and other domains we identified in all unicellular holozoans are part of the two-component signaling system that has been lost in animals, suggesting the continued use of this system in the closest relatives of animals and emphasizing the importance of studying loss of function as well as gain in major evolutionary transitions.
FIGURE 7. Bornella hermanni Angas, 1864. A–F, Living animals. A-E, Specimens from New South Wales. A in Systematics and preliminary phylogeny of Bornellidae (Mollusca: Nudibranchia: Dendronotina) based on morphological characters with description of four new species
FIGURE 7. Bornella hermanni Angas, 1864. A–F, Living animals. A-E, Specimens from New South Wales. A, Photo: J. Wyche (AM C. 126475); B, Photo: W.B. Rudman (AM C. 152056); C, Photo: W.B. Rudman (AM C. 138000); D, Photo: J. Fields (AM C. 113793); E, Photo: J. Fields (AM C. 108069). F. Marshall Islands, Photo: S. Johnson (CASIZ 175404).
FIGURE 16. Living animals. A–B in Systematics and preliminary phylogeny of Bornellidae (Mollusca: Nudibranchia: Dendronotina) based on morphological characters with description of four new species
FIGURE 16. Living animals. A–B, Bornella pele sp. nov. A, Hawaii, Kahoolawe Island, Halona Point, Photo: P. Fiene. B, Specimen from Japan, Photo: J. Imamoto. C–D, Bornella valdae sp. nov. South Africa, Natal, Oslo Beach. C, Photo: V. Fraser. D, Photo: L. Warren. E–F, Bornella johnsonorum sp. nov. Marshall Islands, Oceanside Ennubuj-Ennylabegan reef, Kwajalein Atoll, Photo: J. Johnson. G–H, Pseudobornella orientalis Baba, 1932. China, Luoyuan Bay, Photo: S. Xikum.
FIGURE 1. Living animals. A–B in Systematics and preliminary phylogeny of Bornellidae (Mollusca: Nudibranchia: Dendronotina) based on morphological characters with description of four new species
FIGURE 1. Living animals. A–B, Bornella stellifer (Adams and Reeve in Adams, 1848); A, Malaysia, Malay Peninsula, South China Sea, Photo: T.M. Gosliner. B, Papua New Guinea, north coast, Madang, Photo: R.C. Willan. C–D, Bornella calcarata Mörch, 1863; C, Brazil, Photo: C.M. Cunha. D, Guarapi, Espiritu Santo, Brazil, Photo: J.P. Cauduro Filho. E, Bornella sarape Bertsch, 1980, Pacific coast of Mexico, Photo: A. Hermosillo. F, Bornella anguilla Johnson, 1984, Japan, Ryukyu Island, Okinawa, Photo: R.F. Bolland. G, Bornella irvingi Edmunds and Preece, 1996, Pitcairn Islands, Photo: J. Jamieson. H, Bornella dotoides sp. nov. Papua New Guinea, north Madang, "The Quarry", Photo: T.M. Gosliner.
Data from: Novel predators reshape holozoan phylogeny and reveal the presence of a two-component signalling system in the ancestor of animals
Open the record for dataset details and reuse information.
Data from: Diet and phylogeny shape the gut microbiota of Antarctic seals: a comparison of wild and captive animals
Open the record for dataset details and reuse information.
Fig. 2 in Application Of Dna Barcoding In Taxonomy And Phylogeny: An Individual Case Of Coi Partial Gene Sequencing From Seven Animal Species
Fig. 2. Phylogenetic position of E. roumanicus, Bayesian inference phylogenetic tree. Sequences obtained by us are written in bold.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.