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18 results for “Apostichopus japonicus”
Data from: Non-destructive geographical traceability of sea cucumber (Apostichopus japonicus) using near infrared spectroscopy combined with chemometric methods
Sea cucumber is the major tonic seafood worldwide, and geographical origin traceability is an important part of its quality and safety control. In this work, a non-destructive method for origin traceability of sea cucumber (Apostichopus japonicus) from northern China Sea and East China Sea using near infrared spectroscopy (NIRS) and multivariate analysis methods was proposed. Total fat contents of 189 fresh sea cucumber samples were determined and partial least squares (PLS) regression was used to establish the quantitative NIRS model. The ordered predictors selection (OPS) algorithm was performed to select feasible wavelength regions for the construction of PLS and identification models. The identification model was developed by the principal component analysis combined with Mahalanobis distance (PCA-MD) and Scaling to the first range algorithms. In the test set of the optimum PLS models, the root mean square errors of prediction (RMSEP) was 0.45, and correlation coefficients (R2) was 0.90. The correct classification rates of 100% were obtained both in identification calibration model and test model. The overall results indicated that NIRS method combined with chemometric analysis was a suitable tool for origin traceability and identification of fresh sea cucumber samples from nine origins in China.
Data from: Transcriptome sequencing of sea cucumber (Apostichopus japonicus) and the identification of gene-associated markers
Open the record for dataset details and reuse information.
Data from: Non-destructive geographical traceability of sea cucumber (Apostichopus japonicus) using near infrared spectroscopy combined with chemometric methods
Open the record for dataset details and reuse information.
Transcriptome landscape during tenderization in sea cucumber Apostichopus japonicus
GEO Series GSE123077. Apostichopus japonicus. 9 samples. Type: Expression profiling by high throughput sequencing.
Differential gene expression in the intestine of sea cucumber (Apostichopus japonicus) under low and high salinity conditions
GEO Series GSE103466. Apostichopus japonicus. 9 samples. Type: Expression profiling by high throughput sequencing.
Gene expression profiles of the respiratory tree of sea cucumber Apostichopus japonicus during aestivation by RNA-seq
GEO Series GSE53815. Apostichopus japonicus. 3 samples. Type: Expression profiling by high throughput sequencing.
NA-Seq reveals dynamic changes of gene expression in key stages of intestine regeneration in the sea cucumber Apostichopus japonicus.
GEO Series GSE44995. Apostichopus japonicus. 5 samples. Type: Expression profiling by high throughput sequencing.
RNA-Seq dependent transcriptional analysis unveils adaptive mechanisms in the intestine of sea cucumber Apostichopus japonicus during aestivation
GEO Series GSE51137. Apostichopus japonicus. 3 samples. Type: Expression profiling by high throughput sequencing.
Large-scale identification and comparative analysis of miRNA expression profile in the respiratory tree of the sea cucumber Apostichopus japonicus during aestivation
GEO Series GSE52226. Apostichopus japonicus. 8 samples. Type: Non-coding RNA profiling by array; Non-coding RNA profiling by high throughput sequencing.
Large-scale identification and comparative analysis of miRNA expression profile in the respiratory tree of the sea cucumber Apostichopus japonicus during aestivation (part 2)
GEO Series GSE52225. Apostichopus japonicus. 2 samples. Type: Non-coding RNA profiling by high throughput sequencing.
Large-scale identification and comparative analysis of miRNA expression profile in the respiratory tree of the sea cucumber Apostichopus japonicus during aestivation (part 1)
GEO Series GSE52224. Apostichopus japonicus. 6 samples. Type: Non-coding RNA profiling by array.
High-Throughput Sequencing Reveals Differential Expression of miRNAs in respiratory tree from the sea cucumber Apostichopus japonicus Under Hypoxia Stress
GEO Series GSE100603. Apostichopus japonicus. 9 samples. Type: Non-coding RNA profiling by high throughput sequencing.
High-throughput Sequencing Reveals Differential expression of MicroRNAs during intestine regeneration of sea cucumber Apostichopus japonicus
GEO Series GSE87210. Apostichopus japonicus. 6 samples. Type: Non-coding RNA profiling by high throughput sequencing.
Analysis of differentially expressed genes in the sea cucumber Apostichopus japonicus under heat stress
GEO Series GSE205975. Apostichopus japonicus. 12 samples. Type: Expression profiling by high throughput sequencing.
Differential gene expression in the body wall of the sea cucumber (Apostichopus japonicus) under strong lighting and dark conditions
GEO Series GSE87803. Apostichopus japonicus. 3 samples. Type: Expression profiling by high throughput sequencing.
Understanding microRNAs regulation in heat shock response in the sea cucumber Apostichopus japonicus
GEO Series GSE115076. Apostichopus japonicus. 9 samples. Type: Non-coding RNA profiling by high throughput sequencing.
Explore the gene regulation mechanism under high temperature and low dissolved oxygen stress in the sea cucumber Apostichopus japonicus by high-throughput RNA-seq technology
GEO Series GSE252259. Apostichopus japonicus. 12 samples. Type: Expression profiling by high throughput sequencing.
Differential expression of genes in the respiratory tree of sea cucumber (Apostichopus japonicus) under normal dissolved oxygen and hypoxia conditions
GEO Series GSE100042. Apostichopus japonicus. 9 samples. Type: Expression profiling by high throughput sequencing.
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.