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17 results for “Aragonite skeleton”
Supplementary material 4 from: Miyazaki Y, Reimer JD (2015) A new genus and species of octocoral with aragonite calcium-carbonate skeleton (Octocorallia, Helioporacea) from Okinawa, Japan. ZooKeys 511: 1-23. https://doi.org/10.3897/zookeys.511.9432
Supplemental Table 4: Explanation note: Genetic distances (p-distances) for mtMutS between Nanipora kamurai and Heliopora coelurea, and for other species of octocorals included in COI phylogeny (See Suppl. material 2).
Supplementary material 3 from: Miyazaki Y, Reimer JD (2015) A new genus and species of octocoral with aragonite calcium-carbonate skeleton (Octocorallia, Helioporacea) from Okinawa, Japan. ZooKeys 511: 1-23. https://doi.org/10.3897/zookeys.511.9432
Supplemental Table 3: Explanation note: Genetic distances (p-distances) for mtMutS between Nanipora kamurai and Heliopora coelurea and for other species of octocorals included in mtMutS phylogeny (see Fig. 12 and Suppl. material 2).
Supplementary material 2 from: Miyazaki Y, Reimer JD (2015) A new genus and species of octocoral with aragonite calcium-carbonate skeleton (Octocorallia, Helioporacea) from Okinawa, Japan. ZooKeys 511: 1-23. https://doi.org/10.3897/zookeys.511.9432
Supplemental Table 2: Explanation note: Outgroup sequences from GenBank used in molecular phylogenetic analyses.
Supplementary material 1 from: Miyazaki Y, Reimer JD (2015) A new genus and species of octocoral with aragonite calcium-carbonate skeleton (Octocorallia, Helioporacea) from Okinawa, Japan. ZooKeys 511: 1-23. https://doi.org/10.3897/zookeys.511.9432
Supplemental Table 1: Explanation note: List of Nanipora kamurai sp. n. specimens examined in this study. Collection information and GenBank accession numbers for corresponding sequences are shown.
The origin and role of organic matrix in coral calcification: insights from comparing coral skeleton and abiogenic aragonite
<p>This file contains all the data and code for "The origin and role of organic matrix in coral calcification: insights from comparing coral skeleton and abiogenic aragonite" by DeCarlo et al. in Frontiers in Marine Science. Run the file, "run.R" in R to reproduce the analysis and create all the figures.</p> <p>Please see the published paper for methods and details: https://www.frontiersin.org/articles/10.3389/fmars.2018.00170/full</p>
Figure 2 from: Miyazaki Y, Reimer JD (2015) A new genus and species of octocoral with aragonite calcium-carbonate skeleton (Octocorallia, Helioporacea) from Okinawa, Japan. ZooKeys 511: 1-23. https://doi.org/10.3897/zookeys.511.9432
Figure 2 - In situ colony of Nanipora kamurai with expanded polyps at Ama Beach, Zamami Island, Okinawa, Japan, 16 July 2012. A growing edge of the colony B middle portion of the colony. Scale bar: approximately 5 mm.
Figure 3 from: Miyazaki Y, Reimer JD (2015) A new genus and species of octocoral with aragonite calcium-carbonate skeleton (Octocorallia, Helioporacea) from Okinawa, Japan. ZooKeys 511: 1-23. https://doi.org/10.3897/zookeys.511.9432
Figure 3 - Scanning electro-microscope (SEM) image for skeleton of Nanipora kamurai colony. Scale bar: 0.5 mm.
Figure 9 from: Miyazaki Y, Reimer JD (2015) A new genus and species of octocoral with aragonite calcium-carbonate skeleton (Octocorallia, Helioporacea) from Okinawa, Japan. ZooKeys 511: 1-23. https://doi.org/10.3897/zookeys.511.9432
Figure 9 - A–C Different surface calcium carbonate coverage of three calyces (A>B>C) D Skeleton of younger and marginal part of the colony, partly lacks surface cover. Scale bar: 0.2 mm (A), 0.5 mm (B).
Figure 12 from: Miyazaki Y, Reimer JD (2015) A new genus and species of octocoral with aragonite calcium-carbonate skeleton (Octocorallia, Helioporacea) from Okinawa, Japan. ZooKeys 511: 1-23. https://doi.org/10.3897/zookeys.511.9432
Figure 12 - Maximum likelihood tree for mtMutS sequences. Values at branches represent ML and NJ bootstrap probabilities, respectively (>50%). Bold lines represent branches with very high support in Bayesian analyses (>0.95). Sequences without accession numbers were newly obtained in this study.
Figure 1 from: Miyazaki Y, Reimer JD (2015) A new genus and species of octocoral with aragonite calcium-carbonate skeleton (Octocorallia, Helioporacea) from Okinawa, Japan. ZooKeys 511: 1-23. https://doi.org/10.3897/zookeys.511.9432
Figure 1 - Living colony of Nanipora kamurai attached to the bottoms (=downward facing side) of calcium-carbonate stone at Ama Beach, Zamami Island, Okinawa, Japan, 16 July 2012. Scale bar: approximately 5 mm.
Figure 8 from: Miyazaki Y, Reimer JD (2015) A new genus and species of octocoral with aragonite calcium-carbonate skeleton (Octocorallia, Helioporacea) from Okinawa, Japan. ZooKeys 511: 1-23. https://doi.org/10.3897/zookeys.511.9432
Figure 8 - Surface calcium carbonate of the darker portions. Beneath, large holes (up to 200 μm) are shown. Scale bar: 0.02 mm.
Figure 11 from: Miyazaki Y, Reimer JD (2015) A new genus and species of octocoral with aragonite calcium-carbonate skeleton (Octocorallia, Helioporacea) from Okinawa, Japan. ZooKeys 511: 1-23. https://doi.org/10.3897/zookeys.511.9432
Figure 11 - 3D CT image of soft tissue. Solenial tubes forming network are shown. Scale bar: 0.5 mm.
Figure 5 from: Miyazaki Y, Reimer JD (2015) A new genus and species of octocoral with aragonite calcium-carbonate skeleton (Octocorallia, Helioporacea) from Okinawa, Japan. ZooKeys 511: 1-23. https://doi.org/10.3897/zookeys.511.9432
Figure 5 - Surface of the calyx. Reticulate pattern made by numerous tiny pores. Scale bar: 0.04 mm.
Figure 7 from: Miyazaki Y, Reimer JD (2015) A new genus and species of octocoral with aragonite calcium-carbonate skeleton (Octocorallia, Helioporacea) from Okinawa, Japan. ZooKeys 511: 1-23. https://doi.org/10.3897/zookeys.511.9432
Figure 7 - Calyx of Nanipora kamurai seen from above. Cavities extend in a longitudinal direction down through the calyx are shown. Scale bar: 0.2 mm.
Figure 6 from: Miyazaki Y, Reimer JD (2015) A new genus and species of octocoral with aragonite calcium-carbonate skeleton (Octocorallia, Helioporacea) from Okinawa, Japan. ZooKeys 511: 1-23. https://doi.org/10.3897/zookeys.511.9432
Figure 6 - Indentations seen on the top of the calyx of Nanipora kamurai. Scale bar: 0.1 mm.
Figure 10 from: Miyazaki Y, Reimer JD (2015) A new genus and species of octocoral with aragonite calcium-carbonate skeleton (Octocorallia, Helioporacea) from Okinawa, Japan. ZooKeys 511: 1-23. https://doi.org/10.3897/zookeys.511.9432
Figure 10 - Cavities seen in cross sectioned coenenchymal skeleton. Scale bar: 0.1 mm.
Figure 4 from: Miyazaki Y, Reimer JD (2015) A new genus and species of octocoral with aragonite calcium-carbonate skeleton (Octocorallia, Helioporacea) from Okinawa, Japan. ZooKeys 511: 1-23. https://doi.org/10.3897/zookeys.511.9432
Figure 4 - Calyx of Nanipora kamurai. Reticulate pattern and wrinkles are shown. Scale bar: 0.2 mm.
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