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datasets available to search
ShareScore release 0.9.0
Dataset results
35 results for “BALF”
Pinus contorta subsp. murrayana (Balf.) A.E.Murray (BR0000025052060)
Belgium Herbarium image of <a href="https://www.plantentuinmeise.be">Meise Botanic Garden</a>.
Pinus contorta subsp. murrayana (Balf.) A.E.Murray (BR0000025052053)
Belgium Herbarium image of <a href="https://www.plantentuinmeise.be">Meise Botanic Garden</a>.
Pinus contorta subsp. murrayana (Balf.) A.E.Murray (BR0000025052077)
Belgium Herbarium image of <a href="https://www.plantentuinmeise.be">Meise Botanic Garden</a>.
Pinus contorta subsp. murrayana (Balf.) A.E.Murray (BR0000025052046)
Belgium Herbarium image of <a href="https://www.plantentuinmeise.be">Meise Botanic Garden</a>.
Data for manuscript, "An optimized workflow for MS-based quantitative proteomics of challenging clinical bronchoalveolar lavage fluid (BALF) samples"
<p>Clinical BALF samples are rich in biomolecules, including proteins, and useful for molecular studies of lung health and disease. However, MS based proteomic analysis of BALF is impeded by the dynamic range of protein abundance, and potential for interfering contaminants. We have developed a workflow that eliminates these challenges. By combining high abundance protein depletion, protein trapping, clean-up, and in-situ tryptic digestion, our workflow is compatible with both qualitative and quantitative MS-based proteomic analysis. The workflow includes collection of endogenous peptides for peptidomic analysis of BALF, if desired, as well as amenability to offline semi-preparative or microscale fractionation of peptide mixtures prior to LC-MS/MS analysis, for increased depth of analysis. We show the effectiveness of this workflow on BALF samples from COPD patients. Overall, our workflow should allow MS-based proteomics to be applied to a wide variety of studies focused on BALF clinical samples. </p> <p>Note: Due to the nature of some of the files, file <em>wendt005_ostr0103_18260_20210831_BALF_FAIMS_MS2_TMT16.msf, wendt005_ostr0103_18976_20230202_quantReport.msf, cmsptc_higgi022_18988_20230203_18976DW_EnF_hcdlT_1R.raw, cmsptc_higgi022_18988_20230203_18976DW_EnF_hcdlT_2R.raw, cmsptc_higgi022_18988_20230203_18976DW_EnF_hcdlT_3R.raw and cmsptc_higgi022_18988_20230203_18976DW_Eclipse_noFAIMS_quantReport.msf</em> were zipped into compressed folders before uploading.</p>
Research on the Relationship of Ions Content with TNF-α and TGF-β Expression in BALF of Silica-induced Rats
<p>All data of this article.</p>
Neoadjuvant Lazertinib Therapy in EGFR-Mutation Positive Lung Adenocarcinoma Detected by BALF Liquid Biopsy
ClinicalTrials.gov study NCT05469022. IPD Sharing: Not stated. Countries: 1. Publications: 14.
Distinct exosomal miRNA profiles from BALF and lung tissue from COPD and IPF patients
GEO Series GSE180651. Homo sapiens. 72 samples. Type: Non-coding RNA profiling by high throughput sequencing.
Single cell gene expression profile of bronchoalveolar lavage fluid (BALF) cells from Apoa1-/- and Apoa1+/+ mice challenged with LPS and house dust mite
GEO Series GSE234287. Mus musculus. 4 samples. Type: Expression profiling by high throughput sequencing.
SARS-CoV-2 viral persistence in lung alveolar macrophages is controlled by IFN-g and NK cells [BALF_BloodNK_SARSWu_NHP]
GEO Series GSE243733. Macaca fascicularis. 24 samples. Type: Expression profiling by array.
ScRNA-seq Expression of APOC2 and IFI27 Identifies Four Alveolar Macrophage Superclusters in Cystic Fibrosis and Healthy BALF
GEO Series GSE193782. Homo sapiens. 14 samples. Type: Expression profiling by high throughput sequencing.
SARS-CoV-2 viral persistence in lung alveolar macrophages is controlled by IFN-g and NK cells [BALF_NK_SARSWu_NHP]
GEO Series GSE243732. Macaca fascicularis. 20 samples. Type: Expression profiling by array.
Gene expression profile at single cell level of Bronchoalveolar Lavage fluid (BALF) cells from mice
GEO Series GSE212402. Mus musculus. 6 samples. Type: Expression profiling by high throughput sequencing.
Exosomal microRNA (miRNA) expression in Blonchoalveolar lavage fluid (BALF) collected from mice infected with influenza virus and inoculated with poly(I:C).
GEO Series GSE107107. Mus musculus. 15 samples. Type: Non-coding RNA profiling by array.
Characterisation of resident alveolar macrophages in bronchoalveolar lavage fluid (BALF) in non-fumer healthy, fumer and COPD patients
GEO Series GSE183982. Homo sapiens. 36 samples. Type: Expression profiling by high throughput sequencing.
Gene expression profile at single cell level of monocytes (MOs) and T cells from the lungs and from broncho-alveolar lavage fluids (BALF) from Mock and MuHV-4 infected WT and CCR2 KO mice.
GEO Series GSE205923. Mus musculus. 6 samples. Type: Expression profiling by high throughput sequencing.
Pro-viral miRNAs are detected in BALF extracellular vesicles of patients with influenza virus-induced ARDS
GEO Series GSE112728. Homo sapiens. 9 samples. Type: Expression profiling by RT-PCR.
Olmutinib Trial in T790M (+) NSCLC Patients Detected by Liquid Biopsy Using BALF Extracellular Vesicular DNA
ClinicalTrials.gov study NCT03228277. IPD Sharing: NO. Countries: 1. Publications: 0.
Correlation Analysis of Xpert Carba-R Detection of Non-colonized CRE in BALF and Rectal Swabs From Patients With LRTI
ClinicalTrials.gov study NCT06636890. IPD Sharing: Not stated. Countries: 1. Publications: 0.
Single-cell Landscape of BALF in Patients With Severe ARDS and CARDS
ClinicalTrials.gov study NCT05933291. IPD Sharing: Not stated. Countries: 1. Publications: 0.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.