Find research datasets worth reusing
Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.
202
datasets available to search
ShareScore release 0.9.0
Dataset results
202 results for “Backcross”
LA1141 × OH8245 inbred backcross (IBC) single nucleotide polymorphism (SNP) markers for genetic studies
<p>The LA1141 × OH8245 157 polymorphic SNP markers from an optimized tomato panel Sim et al., 2012 were used for linkage map construction in the BC<sub>2</sub>S<sub>3</sub> IBC and composite interval mapping QTL analysis. Genetic map position and physical position corresponding to Sl4.0 (Hosmani et al., 2019), and flanking sequences are provided.</p>
Data from: Solanum pennellii (LA5240) backcross inbred lines (BILs) for high resolution mapping in tomato
<p>Wild species are an invaluable source of new traits for crop improvement. Over the years the tomato community bred cultivated lines that carry introgressions from different species of the tomato tribe to facilitate trait discovery and mapping. The next phase in such projects is to find the genes that drive the identified phenotypes. This can be achieved by genotyping a few thousand individuals resulting in fine-mapping that can potentially identify the causative gene. To couple trait discovery and fine mapping we are presenting large, recombination-rich, Backcross Inbred Line (BIL) populations involving an unexplored accession of the wild, green-fruited species Solanum pennellii (LA5240; the Lost Accession) with two modern tomato inbreds: LEA, determinate, and TOP indeterminate. The LEA and TOP BILs are in BC2F6-8 generation and include 1,400 and 500 lines respectively. The BILs were genotyped with ~5,000 SPET markers, showing that in the euchromatic regions there was one recombinant every 17-18 Kb while in the heterochromatin a recombinant every 600-700 Kb (TOP and LEA respectively). To gain perspective on the topography of recombination we compared five independent members of the self-pruning gene family with their respective neighboring genes; based on PCR markers, in all cases we found recombinants. Further mapping analysis of two known morphological mutations that segregated in the BILs (Self-pruning and Hair), showed that the maximal delimited intervals were 73 Kb and 210 Kb respectively and included the known causative genes. The LOST_BILs provide a solid framework to study traits derived from a tolerant wild tomato.</p>
Figure 4 in Introgression of bacterial leaf blight (BLB) resistant gene, Xa7 into MARDI elite variety, MR219 by marker assisted backcrossing (MABC) approach
Figure 4. PCR-based genetic polymorphism analysis of Xa7 gene closed linked, ID7 marker. Agarose gel profile of backcrossed progenies in 2% (w/v) of 1X TBE agarose gel. Lane L: 100bp DNA ladder. Lanes D and R represent IRBB7 and MR219 respectively. Line 1-22: (1) PB-2-91, (2) PB-2-107, (3) PB-2-156, (4) PB-2-224, (5) PB-2-234, (6) PB-2-238, (7) PB-2-258, (8) PB-2-29, (9) PB-2-77, (10) PB-2-226, (11) PC3-26-2, (12) PC-39-3, (13) PB-2-34, (14) PB-2-35, (15) PB-2-150, (16) PB-2-223, (17) PB-2-252, (18) PC-3-14-3, (19) PC-3-23-1, (20) PB-2-32, (21) PC3-5-2, (22) MR263.
Figure 3 in Introgression of bacterial leaf blight (BLB) resistant gene, Xa7 into MARDI elite variety, MR219 by marker assisted backcrossing (MABC) approach
Figure 3. Differential response of parents. (A) MR263, (B) CL2, (C) IRBB7 and (D) MR219, respectively after being inoculated with Xanthomonas oryzae pv. oryzae at 14 DAI.
Figure 2 in Introgression of bacterial leaf blight (BLB) resistant gene, Xa7 into MARDI elite variety, MR219 by marker assisted backcrossing (MABC) approach
Figure 2. Bacterial leaf blight disease progression recorded on four potential parents; IRBB7 (blue), MR219 (orange), CL2 (gray) and MR219 (yellow) from 3 to 30 days after inoculation.
Data from: Solanum pennellii (LA5240) backcross inbred lines (BILs) for high resolution mapping in tomato
Open the record for dataset details and reuse information.
Data from: Genotype and male sterility phenotype data for An. coluzzii x An. quadriannulatus backcross
<p>The <i>Anopheles gambiae</i> complex is comprised of eight morphologically indistinguishable species and has emerged as a model system for the study of speciation genetics due to the rapid radiation of its member species over the past two million years. Male hybrids between most <i>An. gambiae</i> complex species pairs are sterile, and some genotype combinations in hybrid males cause inviability. We investigated the genetic basis of hybrid male inviability and sterility between <i>An. coluzzii</i> and <i>An. quadriannulatus </i>by measuring segregation distortion and performing a QTL analysis of sterility in a backcross population. Hybrid males were inviable if they inherited the <i>An. coluzzii</i> X chromosome and were homozygous at one or more loci in 18.9 Mb region of chromosome 3. The <i>An. coluzzii </i>X chromosome has a disproportionately large effect on hybrid sterility when introgressed into an <i>An. quadriannulatus</i> genetic background. Additionally, an epistatic interaction between the <i>An. coluzzii </i>X and a 1.12 Mb, pericentric region of the <i>An. quadriannulatus </i>3L chromosome arm has a statistically significant contribution to the hybrid sterility phenotype. This same epistatic interaction occurs when the <i>An. coluzzii</i> X is introgressed into the genetic background of <i>An. arabiensis, </i>the sister species of <i>An. quadriannulatus</i>, suggesting that this may represent one of the first Dobzhansky–Muller incompatibilities to evolve early in the radiation of the <i>Anopheles gambiae </i>species complex. We describe the additive effects of each sterility QTL, epistatic interactions between them, and genes within QTL with protein functions related to mating behavior, reproduction, spermatogenesis, and microtubule morphogenesis, whose divergence may contribute to post-zygotic reproductive isolation between <i>An. coluzzii </i>and <i>An. quadriannulatus.</i></p>
Figure 1 in Introgression of bacterial leaf blight (BLB) resistant gene, Xa7 into MARDI elite variety, MR219 by marker assisted backcrossing (MABC) approach
Figure 1. Backcrossing program used in this study to develop improved lines of rice (BC F ).
NY230 flp-25(gk1016)(backcrossed x2) | 2010-01-11T12:54:54+00:00
<blockquote> <p>This experiment is part of the <em>C.elegans behavioural database</em>. For more information and the complete collection of experiments visit http://movement.openworm.org</p> </blockquote> <ul> <li><b>preview link</b> : https://www.youtube.com/watch?v=v2qwHjS1l7E</li> <li><b>strain</b> : NY230</li> <li><b>timestamp</b> : 2010-01-11T12:54:54+00:00</li> <li><b>gene</b> : flp-25</li> <li><b>chromosome</b> : X</li> <li><b>allele</b> : gk1016</li> <li><b>strain_description</b> : flp-25(gk1016)(backcrossed x2)</li> <li><b>sex</b> : hermaphrodite</li> <li><b>stage</b> : adult</li> <li><b>ventral_side</b> : anticlockwise</li> <li><b>media</b> : NGM agar low peptone</li> <li><b>arena</b> : <ul> <li><b>style</b> : petri</li> <li><b>size</b> : 35</li> <li><b>orientation</b> : away</li> </ul> </li> <li><b>food</b> : OP50</li> <li><b>habituation</b> : 30m wait</li> <li><b>who</b> : Laura Grundy</li> <li><b>protocol</b> : Method in E. Yemini et al. doi:10.1038/nmeth.2560. Worm transferred to arena 30 minutes before recording starts.</li> <li><b>lab</b> : <ul> <li><b>name</b> : William R Schafer</li> <li><b>location</b> : MRC Laboratory of Molecular Biology, Hills Road, Cambridge, CB2 0QH, UK</li> </ul> </li> <li><b>software</b> : <ul> <li><b>name</b> : tierpsy (https://github.com/ver228/tierpsy-tracker)</li> <li><b>version</b> : cbfc23eb4f1ac2f29be75ade7a937eed58a5b219</li> <li><b>featureID</b> : @OMG</li> </ul> </li> <li><b>base_name</b> : flp-25 (gk1016)III on food R_2010_01_11__12_54_54___8___5</li> <li><b>total time (s)</b> : 898.649</li> <li><b>frames per second</b> : 25.1889</li> <li><b>video micrometers per pixel</b> : 4.55526</li> <li><b>number of segmented skeletons</b> : 18098</li> </ul>
NY248 flp-28(gk1075)(backcrossed x3) | 2010-01-20T10:57:14+00:00
<blockquote> <p>This experiment is part of the <em>C.elegans behavioural database</em>. For more information and the complete collection of experiments visit http://movement.openworm.org</p> </blockquote> <ul> <li><b>preview link</b> : https://www.youtube.com/watch?v=CAXo3N2Lluc</li> <li><b>strain</b> : NY248</li> <li><b>timestamp</b> : 2010-01-20T10:57:14+00:00</li> <li><b>gene</b> : flp-28</li> <li><b>chromosome</b> : X</li> <li><b>allele</b> : gk1075</li> <li><b>strain_description</b> : flp-28(gk1075)(backcrossed x3)</li> <li><b>sex</b> : hermaphrodite</li> <li><b>stage</b> : adult</li> <li><b>ventral_side</b> : clockwise</li> <li><b>media</b> : NGM agar low peptone</li> <li><b>arena</b> : <ul> <li><b>style</b> : petri</li> <li><b>size</b> : 35</li> <li><b>orientation</b> : away</li> </ul> </li> <li><b>food</b> : OP50</li> <li><b>habituation</b> : 30m wait</li> <li><b>who</b> : Laura Grundy</li> <li><b>protocol</b> : Method in E. Yemini et al. doi:10.1038/nmeth.2560. Worm transferred to arena 30 minutes before recording starts.</li> <li><b>lab</b> : <ul> <li><b>name</b> : William R Schafer</li> <li><b>location</b> : MRC Laboratory of Molecular Biology, Hills Road, Cambridge, CB2 0QH, UK</li> </ul> </li> <li><b>software</b> : <ul> <li><b>name</b> : tierpsy (https://github.com/ver228/tierpsy-tracker)</li> <li><b>version</b> : cbfc23eb4f1ac2f29be75ade7a937eed58a5b219</li> <li><b>featureID</b> : @OMG</li> </ul> </li> <li><b>base_name</b> : flp-28 (gk1075)X on food L_2010_01_20__10_57_14___8___4</li> <li><b>total time (s)</b> : 897.936</li> <li><b>frames per second</b> : 25.641</li> <li><b>video micrometers per pixel</b> : 4.55526</li> <li><b>number of segmented skeletons</b> : 19290</li> </ul>
NY230 flp-25(gk1016)(backcrossed x2) | 2010-01-14T12:16:20+00:00
<blockquote> <p>This experiment is part of the <em>C.elegans behavioural database</em>. For more information and the complete collection of experiments visit http://movement.openworm.org</p> </blockquote> <ul> <li><b>preview link</b> : https://www.youtube.com/watch?v=OleuPAk2-Rw</li> <li><b>strain</b> : NY230</li> <li><b>timestamp</b> : 2010-01-14T12:16:20+00:00</li> <li><b>gene</b> : flp-25</li> <li><b>chromosome</b> : X</li> <li><b>allele</b> : gk1016</li> <li><b>strain_description</b> : flp-25(gk1016)(backcrossed x2)</li> <li><b>sex</b> : hermaphrodite</li> <li><b>stage</b> : adult</li> <li><b>ventral_side</b> : anticlockwise</li> <li><b>media</b> : NGM agar low peptone</li> <li><b>arena</b> : <ul> <li><b>style</b> : petri</li> <li><b>size</b> : 35</li> <li><b>orientation</b> : away</li> </ul> </li> <li><b>food</b> : OP50</li> <li><b>habituation</b> : 30m wait</li> <li><b>who</b> : Laura Grundy</li> <li><b>protocol</b> : Method in E. Yemini et al. doi:10.1038/nmeth.2560. Worm transferred to arena 30 minutes before recording starts.</li> <li><b>lab</b> : <ul> <li><b>name</b> : William R Schafer</li> <li><b>location</b> : MRC Laboratory of Molecular Biology, Hills Road, Cambridge, CB2 0QH, UK</li> </ul> </li> <li><b>software</b> : <ul> <li><b>name</b> : tierpsy (https://github.com/ver228/tierpsy-tracker)</li> <li><b>version</b> : cbfc23eb4f1ac2f29be75ade7a937eed58a5b219</li> <li><b>featureID</b> : @OMG</li> </ul> </li> <li><b>base_name</b> : flp-25 (gk1016)III on food R_2010_01_14__12_16_20___8___6</li> <li><b>total time (s)</b> : 899.938</li> <li><b>frames per second</b> : 25.974</li> <li><b>video micrometers per pixel</b> : 4.55526</li> <li><b>number of segmented skeletons</b> : 19693</li> </ul>
NY248 flp-28(gk1075)(backcrossed x3) | 2010-01-20T10:58:05+00:00
<blockquote> <p>This experiment is part of the <em>C.elegans behavioural database</em>. For more information and the complete collection of experiments visit http://movement.openworm.org</p> </blockquote> <ul> <li><b>preview link</b> : https://www.youtube.com/watch?v=0Tt20AQyaJ4</li> <li><b>strain</b> : NY248</li> <li><b>timestamp</b> : 2010-01-20T10:58:05+00:00</li> <li><b>gene</b> : flp-28</li> <li><b>chromosome</b> : X</li> <li><b>allele</b> : gk1075</li> <li><b>strain_description</b> : flp-28(gk1075)(backcrossed x3)</li> <li><b>sex</b> : hermaphrodite</li> <li><b>stage</b> : adult</li> <li><b>ventral_side</b> : anticlockwise</li> <li><b>media</b> : NGM agar low peptone</li> <li><b>arena</b> : <ul> <li><b>style</b> : petri</li> <li><b>size</b> : 35</li> <li><b>orientation</b> : away</li> </ul> </li> <li><b>food</b> : OP50</li> <li><b>habituation</b> : 30m wait</li> <li><b>who</b> : Laura Grundy</li> <li><b>protocol</b> : Method in E. Yemini et al. doi:10.1038/nmeth.2560. Worm transferred to arena 30 minutes before recording starts.</li> <li><b>lab</b> : <ul> <li><b>name</b> : William R Schafer</li> <li><b>location</b> : MRC Laboratory of Molecular Biology, Hills Road, Cambridge, CB2 0QH, UK</li> </ul> </li> <li><b>software</b> : <ul> <li><b>name</b> : tierpsy (https://github.com/ver228/tierpsy-tracker)</li> <li><b>version</b> : cbfc23eb4f1ac2f29be75ade7a937eed58a5b219</li> <li><b>featureID</b> : @OMG</li> </ul> </li> <li><b>base_name</b> : flp-28 (gk1075)X on food R_2010_01_20__10_58_05__4</li> <li><b>total time (s)</b> : 898.141</li> <li><b>frames per second</b> : 27.1739</li> <li><b>video micrometers per pixel</b> : 4.48488</li> <li><b>number of segmented skeletons</b> : 22188</li> </ul>
NY230 flp-25(gk1016)(backcrossed x2) | 2010-01-11T12:55:43+00:00
<blockquote> <p>This experiment is part of the <em>C.elegans behavioural database</em>. For more information and the complete collection of experiments visit http://movement.openworm.org</p> </blockquote> <ul> <li><b>preview link</b> : https://www.youtube.com/watch?v=yfOaXfK0iUI</li> <li><b>strain</b> : NY230</li> <li><b>timestamp</b> : 2010-01-11T12:55:43+00:00</li> <li><b>gene</b> : flp-25</li> <li><b>chromosome</b> : X</li> <li><b>allele</b> : gk1016</li> <li><b>strain_description</b> : flp-25(gk1016)(backcrossed x2)</li> <li><b>sex</b> : hermaphrodite</li> <li><b>stage</b> : adult</li> <li><b>ventral_side</b> : clockwise</li> <li><b>media</b> : NGM agar low peptone</li> <li><b>arena</b> : <ul> <li><b>style</b> : petri</li> <li><b>size</b> : 35</li> <li><b>orientation</b> : away</li> </ul> </li> <li><b>food</b> : OP50</li> <li><b>habituation</b> : 30m wait</li> <li><b>who</b> : Laura Grundy</li> <li><b>protocol</b> : Method in E. Yemini et al. doi:10.1038/nmeth.2560. Worm transferred to arena 30 minutes before recording starts.</li> <li><b>lab</b> : <ul> <li><b>name</b> : William R Schafer</li> <li><b>location</b> : MRC Laboratory of Molecular Biology, Hills Road, Cambridge, CB2 0QH, UK</li> </ul> </li> <li><b>software</b> : <ul> <li><b>name</b> : tierpsy (https://github.com/ver228/tierpsy-tracker)</li> <li><b>version</b> : cbfc23eb4f1ac2f29be75ade7a937eed58a5b219</li> <li><b>featureID</b> : @OMG</li> </ul> </li> <li><b>base_name</b> : flp-25 (gk1016)III on food L_2010_01_11__12_55_43__4</li> <li><b>total time (s)</b> : 899.5</li> <li><b>frames per second</b> : 25.7732</li> <li><b>video micrometers per pixel</b> : 4.78447</li> <li><b>number of segmented skeletons</b> : 20109</li> </ul>
NY230 flp-25(gk1016)(backcrossed x2) | 2010-01-14T12:17:08+00:00
<blockquote> <p>This experiment is part of the <em>C.elegans behavioural database</em>. For more information and the complete collection of experiments visit http://movement.openworm.org</p> </blockquote> <ul> <li><b>preview link</b> : https://www.youtube.com/watch?v=p6VntOkYZqs</li> <li><b>strain</b> : NY230</li> <li><b>timestamp</b> : 2010-01-14T12:17:08+00:00</li> <li><b>gene</b> : flp-25</li> <li><b>chromosome</b> : X</li> <li><b>allele</b> : gk1016</li> <li><b>strain_description</b> : flp-25(gk1016)(backcrossed x2)</li> <li><b>sex</b> : hermaphrodite</li> <li><b>stage</b> : adult</li> <li><b>ventral_side</b> : clockwise</li> <li><b>media</b> : NGM agar low peptone</li> <li><b>arena</b> : <ul> <li><b>style</b> : petri</li> <li><b>size</b> : 35</li> <li><b>orientation</b> : away</li> </ul> </li> <li><b>food</b> : OP50</li> <li><b>habituation</b> : 30m wait</li> <li><b>who</b> : Laura Grundy</li> <li><b>protocol</b> : Method in E. Yemini et al. doi:10.1038/nmeth.2560. Worm transferred to arena 30 minutes before recording starts.</li> <li><b>lab</b> : <ul> <li><b>name</b> : William R Schafer</li> <li><b>location</b> : MRC Laboratory of Molecular Biology, Hills Road, Cambridge, CB2 0QH, UK</li> </ul> </li> <li><b>software</b> : <ul> <li><b>name</b> : tierpsy (https://github.com/ver228/tierpsy-tracker)</li> <li><b>version</b> : cbfc23eb4f1ac2f29be75ade7a937eed58a5b219</li> <li><b>featureID</b> : @OMG</li> </ul> </li> <li><b>base_name</b> : flp-25 (gk1016)III on food L_2010_01_14__12_17_08__6</li> <li><b>total time (s)</b> : 898.81</li> <li><b>frames per second</b> : 24.0385</li> <li><b>video micrometers per pixel</b> : 4.78447</li> <li><b>number of segmented skeletons</b> : 21095</li> </ul>
NY248 flp-28(gk1075)(backcrossed x3) | 2010-01-21T16:44:25+00:00
<blockquote> <p>This experiment is part of the <em>C.elegans behavioural database</em>. For more information and the complete collection of experiments visit http://movement.openworm.org</p> </blockquote> <ul> <li><b>preview link</b> : https://www.youtube.com/watch?v=wsKIBG8wCC4</li> <li><b>strain</b> : NY248</li> <li><b>timestamp</b> : 2010-01-21T16:44:25+00:00</li> <li><b>gene</b> : flp-28</li> <li><b>chromosome</b> : X</li> <li><b>allele</b> : gk1075</li> <li><b>strain_description</b> : flp-28(gk1075)(backcrossed x3)</li> <li><b>sex</b> : hermaphrodite</li> <li><b>stage</b> : adult</li> <li><b>ventral_side</b> : clockwise</li> <li><b>media</b> : NGM agar low peptone</li> <li><b>arena</b> : <ul> <li><b>style</b> : petri</li> <li><b>size</b> : 35</li> <li><b>orientation</b> : away</li> </ul> </li> <li><b>food</b> : OP50</li> <li><b>habituation</b> : 30m wait</li> <li><b>who</b> : Laura Grundy</li> <li><b>protocol</b> : Method in E. Yemini et al. doi:10.1038/nmeth.2560. Worm transferred to arena 30 minutes before recording starts.</li> <li><b>lab</b> : <ul> <li><b>name</b> : William R Schafer</li> <li><b>location</b> : MRC Laboratory of Molecular Biology, Hills Road, Cambridge, CB2 0QH, UK</li> </ul> </li> <li><b>software</b> : <ul> <li><b>name</b> : tierpsy (https://github.com/ver228/tierpsy-tracker)</li> <li><b>version</b> : cbfc23eb4f1ac2f29be75ade7a937eed58a5b219</li> <li><b>featureID</b> : @OMG</li> </ul> </li> <li><b>base_name</b> : flp-28 (gk1075)X on food_2010_01_21__16_44_25___4___9</li> <li><b>total time (s)</b> : 897.624</li> <li><b>frames per second</b> : 31.746</li> <li><b>video micrometers per pixel</b> : 4.59557</li> <li><b>number of segmented skeletons</b> : 17779</li> </ul>
NY248 flp-28(gk1075)(backcrossed x3) | 2010-01-20T10:57:44+00:00
<blockquote> <p>This experiment is part of the <em>C.elegans behavioural database</em>. For more information and the complete collection of experiments visit http://movement.openworm.org</p> </blockquote> <ul> <li><b>preview link</b> : https://www.youtube.com/watch?v=hfZjIAgh46g</li> <li><b>strain</b> : NY248</li> <li><b>timestamp</b> : 2010-01-20T10:57:44+00:00</li> <li><b>gene</b> : flp-28</li> <li><b>chromosome</b> : X</li> <li><b>allele</b> : gk1075</li> <li><b>strain_description</b> : flp-28(gk1075)(backcrossed x3)</li> <li><b>sex</b> : hermaphrodite</li> <li><b>stage</b> : adult</li> <li><b>ventral_side</b> : anticlockwise</li> <li><b>media</b> : NGM agar low peptone</li> <li><b>arena</b> : <ul> <li><b>style</b> : petri</li> <li><b>size</b> : 35</li> <li><b>orientation</b> : away</li> </ul> </li> <li><b>food</b> : OP50</li> <li><b>habituation</b> : 30m wait</li> <li><b>who</b> : Laura Grundy</li> <li><b>protocol</b> : Method in E. Yemini et al. doi:10.1038/nmeth.2560. Worm transferred to arena 30 minutes before recording starts.</li> <li><b>lab</b> : <ul> <li><b>name</b> : William R Schafer</li> <li><b>location</b> : MRC Laboratory of Molecular Biology, Hills Road, Cambridge, CB2 0QH, UK</li> </ul> </li> <li><b>software</b> : <ul> <li><b>name</b> : tierpsy (https://github.com/ver228/tierpsy-tracker)</li> <li><b>version</b> : cbfc23eb4f1ac2f29be75ade7a937eed58a5b219</li> <li><b>featureID</b> : @OMG</li> </ul> </li> <li><b>base_name</b> : flp-28 (gk1075)X on food R_2010_01_20__10_57_44___4___5</li> <li><b>total time (s)</b> : 899.087</li> <li><b>frames per second</b> : 26.8817</li> <li><b>video micrometers per pixel</b> : 4.59557</li> <li><b>number of segmented skeletons</b> : 21867</li> </ul>
NY230 flp-25(gk1016)(backcrossed x2) | 2010-01-14T12:15:38+00:00
<blockquote> <p>This experiment is part of the <em>C.elegans behavioural database</em>. For more information and the complete collection of experiments visit http://movement.openworm.org</p> </blockquote> <ul> <li><b>preview link</b> : https://www.youtube.com/watch?v=phqM-HGlX5c</li> <li><b>strain</b> : NY230</li> <li><b>timestamp</b> : 2010-01-14T12:15:38+00:00</li> <li><b>gene</b> : flp-25</li> <li><b>chromosome</b> : X</li> <li><b>allele</b> : gk1016</li> <li><b>strain_description</b> : flp-25(gk1016)(backcrossed x2)</li> <li><b>sex</b> : hermaphrodite</li> <li><b>stage</b> : adult</li> <li><b>ventral_side</b> : clockwise</li> <li><b>media</b> : NGM agar low peptone</li> <li><b>arena</b> : <ul> <li><b>style</b> : petri</li> <li><b>size</b> : 35</li> <li><b>orientation</b> : away</li> </ul> </li> <li><b>food</b> : OP50</li> <li><b>habituation</b> : 30m wait</li> <li><b>who</b> : Laura Grundy</li> <li><b>protocol</b> : Method in E. Yemini et al. doi:10.1038/nmeth.2560. Worm transferred to arena 30 minutes before recording starts.</li> <li><b>lab</b> : <ul> <li><b>name</b> : William R Schafer</li> <li><b>location</b> : MRC Laboratory of Molecular Biology, Hills Road, Cambridge, CB2 0QH, UK</li> </ul> </li> <li><b>software</b> : <ul> <li><b>name</b> : tierpsy (https://github.com/ver228/tierpsy-tracker)</li> <li><b>version</b> : cbfc23eb4f1ac2f29be75ade7a937eed58a5b219</li> <li><b>featureID</b> : @OMG</li> </ul> </li> <li><b>base_name</b> : flp-25 (gk1016)III on food L_2010_01_14__12_15_38___4___6</li> <li><b>total time (s)</b> : 899.905</li> <li><b>frames per second</b> : 26.8817</li> <li><b>video micrometers per pixel</b> : 4.59557</li> <li><b>number of segmented skeletons</b> : 21677</li> </ul>
NY230 flp-25(gk1016)(backcrossed x2) | 2010-01-12T13:07:15+00:00
<blockquote> <p>This experiment is part of the <em>C.elegans behavioural database</em>. For more information and the complete collection of experiments visit http://movement.openworm.org</p> </blockquote> <ul> <li><b>preview link</b> : https://www.youtube.com/watch?v=9o02vOX3gKE</li> <li><b>strain</b> : NY230</li> <li><b>timestamp</b> : 2010-01-12T13:07:15+00:00</li> <li><b>gene</b> : flp-25</li> <li><b>chromosome</b> : X</li> <li><b>allele</b> : gk1016</li> <li><b>strain_description</b> : flp-25(gk1016)(backcrossed x2)</li> <li><b>sex</b> : hermaphrodite</li> <li><b>stage</b> : adult</li> <li><b>ventral_side</b> : clockwise</li> <li><b>media</b> : NGM agar low peptone</li> <li><b>arena</b> : <ul> <li><b>style</b> : petri</li> <li><b>size</b> : 35</li> <li><b>orientation</b> : away</li> </ul> </li> <li><b>food</b> : OP50</li> <li><b>habituation</b> : 30m wait</li> <li><b>who</b> : Laura Grundy</li> <li><b>protocol</b> : Method in E. Yemini et al. doi:10.1038/nmeth.2560. Worm transferred to arena 30 minutes before recording starts.</li> <li><b>lab</b> : <ul> <li><b>name</b> : William R Schafer</li> <li><b>location</b> : MRC Laboratory of Molecular Biology, Hills Road, Cambridge, CB2 0QH, UK</li> </ul> </li> <li><b>software</b> : <ul> <li><b>name</b> : tierpsy (https://github.com/ver228/tierpsy-tracker)</li> <li><b>version</b> : cbfc23eb4f1ac2f29be75ade7a937eed58a5b219</li> <li><b>featureID</b> : @OMG</li> </ul> </li> <li><b>base_name</b> : flp-25 (gk1016)III on food L_2010_01_12__13_07_15___4___8</li> <li><b>total time (s)</b> : 898.001</li> <li><b>frames per second</b> : 26.5957</li> <li><b>video micrometers per pixel</b> : 4.59557</li> <li><b>number of segmented skeletons</b> : 21487</li> </ul>
NY230 flp-25(gk1016)(backcrossed x2) | 2010-01-11T12:54:12+00:00
<blockquote> <p>This experiment is part of the <em>C.elegans behavioural database</em>. For more information and the complete collection of experiments visit http://movement.openworm.org</p> </blockquote> <ul> <li><b>preview link</b> : https://www.youtube.com/watch?v=QtEuSkx5wPc</li> <li><b>strain</b> : NY230</li> <li><b>timestamp</b> : 2010-01-11T12:54:12+00:00</li> <li><b>gene</b> : flp-25</li> <li><b>chromosome</b> : X</li> <li><b>allele</b> : gk1016</li> <li><b>strain_description</b> : flp-25(gk1016)(backcrossed x2)</li> <li><b>sex</b> : hermaphrodite</li> <li><b>stage</b> : adult</li> <li><b>ventral_side</b> : anticlockwise</li> <li><b>media</b> : NGM agar low peptone</li> <li><b>arena</b> : <ul> <li><b>style</b> : petri</li> <li><b>size</b> : 35</li> <li><b>orientation</b> : away</li> </ul> </li> <li><b>food</b> : OP50</li> <li><b>habituation</b> : 30m wait</li> <li><b>who</b> : Laura Grundy</li> <li><b>protocol</b> : Method in E. Yemini et al. doi:10.1038/nmeth.2560. Worm transferred to arena 30 minutes before recording starts.</li> <li><b>lab</b> : <ul> <li><b>name</b> : William R Schafer</li> <li><b>location</b> : MRC Laboratory of Molecular Biology, Hills Road, Cambridge, CB2 0QH, UK</li> </ul> </li> <li><b>software</b> : <ul> <li><b>name</b> : tierpsy (https://github.com/ver228/tierpsy-tracker)</li> <li><b>version</b> : cbfc23eb4f1ac2f29be75ade7a937eed58a5b219</li> <li><b>featureID</b> : @OMG</li> </ul> </li> <li><b>base_name</b> : flp-25 (gk1016)III on food R_2010_01_11__12_54_12___4___5</li> <li><b>total time (s)</b> : 899.288</li> <li><b>frames per second</b> : 30.1205</li> <li><b>video micrometers per pixel</b> : 4.59557</li> <li><b>number of segmented skeletons</b> : 21504</li> </ul>
NY230 flp-25(gk1016)(backcrossed x2) | 2013-02-28T12:08:30+00:00
<blockquote> <p>This experiment is part of the <em>C.elegans behavioural database</em>. For more information and the complete collection of experiments visit http://movement.openworm.org</p> </blockquote> <ul> <li><b>preview link</b> : https://www.youtube.com/watch?v=jg5gXvcMpZ8</li> <li><b>strain</b> : NY230</li> <li><b>timestamp</b> : 2013-02-28T12:08:30+00:00</li> <li><b>gene</b> : flp-25</li> <li><b>chromosome</b> : X</li> <li><b>allele</b> : gk1016</li> <li><b>strain_description</b> : flp-25(gk1016)(backcrossed x2)</li> <li><b>sex</b> : hermaphrodite</li> <li><b>stage</b> : adult</li> <li><b>ventral_side</b> : clockwise</li> <li><b>media</b> : NGM agar low peptone</li> <li><b>arena</b> : <ul> <li><b>style</b> : petri</li> <li><b>size</b> : 35</li> <li><b>orientation</b> : away</li> </ul> </li> <li><b>food</b> : OP50</li> <li><b>habituation</b> : 30m wait</li> <li><b>who</b> : Laura Grundy</li> <li><b>protocol</b> : Method in E. Yemini et al. doi:10.1038/nmeth.2560. Worm transferred to arena 30 minutes before recording starts.</li> <li><b>lab</b> : <ul> <li><b>name</b> : William R Schafer</li> <li><b>location</b> : MRC Laboratory of Molecular Biology, Hills Road, Cambridge, CB2 0QH, UK</li> </ul> </li> <li><b>software</b> : <ul> <li><b>name</b> : tierpsy (https://github.com/ver228/tierpsy-tracker)</li> <li><b>version</b> : cbfc23eb4f1ac2f29be75ade7a937eed58a5b219</li> <li><b>featureID</b> : @OMG</li> </ul> </li> <li><b>base_name</b> : flp-25 (ko1696) on food L_2013_02_28__12_08_30___5___4</li> <li><b>total time (s)</b> : 898.967</li> <li><b>frames per second</b> : 30.03</li> <li><b>video micrometers per pixel</b> : 4.57165</li> <li><b>number of segmented skeletons</b> : 26446</li> </ul>
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.