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4 results for “BioGeoBEARS”
Dispersal probabilities and geography input for BioGeoBEARS
<p>Dispersal probabilities by assigned geographical time-slice and range data for use in BioGeoBEARS ancestral range reconstruction of Caribbean <em>Micrathena. </em></p>
PHYLIP format text files for BioGeoBEARS analysis. MSc thesis, University of Edinburgh.
<p>PHYLIP format text files for BioGeoBEARS analysis for each dataset. MSc thesis, University of Edinburgh.</p>
Figure 6. Ancestral ranges within Magrebmelia inferred with the package BioGeoBEARS using the DEC model. Temporal estimates derived from a in The Strait of Gibraltar is an ineffective palaeogeographic barrier for some flightless darkling beetles (Coleoptera: Tenebrionidae: Pimelia)
Figure 6. Ancestral ranges within Magrebmelia inferred with the package BioGeoBEARS using the DEC model. Temporal estimates derived from a relaxed molecular clock analysis. Maximum Clade Credibility (MCC) tree showing clade divergence times in millions of years. Coloured squares represent ancestral ranges depicted in the map, upper left; A, Betic, B, Rifean/ Kabylia, C, Middle Atlas, D, High Atlas. Coloured branches correspond to arrows in the lower left maps (1, 2), which indicate diversification route of Magrebmelia throughout the western Mediterranean Basin since the Early Miocene [East lineage (red) and South lineage (purple)], based on biogeographical reconstructions of western Mediterranean Pimelia (MasPeinado et al., 2018). Populations morphologically assignable to P. xauenensis but related to P. mauritanica are indicated by specimen numbers. Maps 1–2 modified from Andeweg (2002); Meulenkamp & Sissingh (2003).
BioGeoBEARS Model Results
<p>BioGeoBEARS Model Results for all datasets. MSc Thesis, University of Edinburgh.</p>
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
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DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.