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10 results for “Bos indicus”
Figure 2 in Infestation of Zebu cattle (Bos indicus Linnaeus) by hard ticks (Acari: Ixodidae) in Maiduguri, Northeastern Nigeria
Figure 2. Numbers of individual ticks of different species collected from different body parts of cattle.
Data from: Genomic loci involved in sensing environmental cues and metabolism affect seasonal coat shedding in Bos taurus and Bos indicus cattle
<p class="MsoNormal"><span>Seasonal shedding of winter hair at the start of summer is well-studied in wild and domesticated populations. However, the genetic influences on this trait and their interactions are poorly understood. We use data from 13,364 cattle with 36,899 repeated phenotypes to investigate the relationship between hair shedding and environmental variables, single nucleotide polymorphisms, and their interactions to understand quantitative differences in seasonal shedding. Using de-regressed estimated breeding values from a repeated records model in a genome-wide association analysis (GWAA) and meta-analysis of year-specific GWAA gave remarkably similar results. These GWAA identified hundreds of variants associated with seasonal hair shedding. There were especially strong associations on chromosomes 5 and 23. Genotype-by-environment interaction GWAA identified 1,040 day-length-by-genotype interaction associations and 17 apparent temperature-by-genotype interaction associations with hair shedding, highlighting the importance of day length on hair shedding. Accurate genomic predictions of hair shedding were created for the entire dataset, Angus, Hereford, Brangus, and multi-breed datasets. Loci related to metabolism and light-sensing have a large influence on seasonal hair shedding. This is one of the largest genetic analyses of a phenological trait and provides insight for both agriculture production and basic science.</span></p>
Data from: Genomic loci involved in sensing environmental cues and metabolism affect seasonal coat shedding in Bos taurus and Bos indicus cattle
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Epigenome screen suggests DNA methylation may affect beef tenderness through signal transduction in Bos indicus
GEO Series GSE190966. Bos indicus. 12 samples. Type: Methylation profiling by high throughput sequencing.
Foot and mouth disease virus (FMDV) infection in Indian cattle (Bos indicus): Profiling of serum microRNAs
GEO Series GSE77489. Bos indicus. 8 samples. Type: Non-coding RNA profiling by array.
Effects of maternal gestational diet, with or without methionine, on muscle transcriptome of Bos indicus-influenced beef calves following a vaccine-induced immunological challenge
GEO Series GSE168091. Bos taurus. 44 samples. Type: Expression profiling by high throughput sequencing.
Transcriptome profiling of peripheral blood mononuclear cells from Bos indicus Malnad Gidda breed
GEO Series GSE71182. Bos indicus. 1 samples. Type: Expression profiling by high throughput sequencing.
RNA sequencing of Bos indicus testicular samples (adult and fetus) and liver samples (adult) [total RNA]
GEO Series GSE106496. Bos indicus. 25 samples. Type: Expression profiling by high throughput sequencing.
RNA sequencing of Bos indicus testicular samples (adult and fetus) and liver samples (adult) [small RNA]
GEO Series GSE106497. Bos indicus. 25 samples. Type: Non-coding RNA profiling by high throughput sequencing.
RNA sequencing of Bos indicus testicular samples (adult and fetus) and liver samples (adult)
GEO Series GSE106498. Bos indicus. 50 samples. Type: Expression profiling by high throughput sequencing; Non-coding RNA profiling by high throughput sequencing.
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.