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171 results for “Breakdown”
Plant Atlas 2020 — British and Irish species weekly apparency (including by-latitude breakdown for Britain), 2000–2019
<p>Plant Atlas 2020 is the most comprehensive survey of plants (flowering plants, ferns and charophytes) ever undertaken in Britain and Ireland. It is based on over 30 million records, collected mainly by volunteer recorders of the Botanical Society of Britain and Ireland (BSBI) between 2000 and 2019, as well as previous nationwide surveys undertaken in the 1950s and 1990s. This resource contains the species weekly “apparency” metrics presented within the Plant Atlas book and website, including a breakdown of species apparency by latitude for Britain. Apparency at the scale presented here (2 x 2 km spatially, smoothed over the period 2000–2019) combines aspects of recorder activity and detectability, with the latter being primarily influenced by phenology at this spatio-temporal scale.</p>
Plant Atlas 2020 — British and Irish vascular plant and charophyte 10 x 10 km distribution trends for 1930–2019 (long-term) and 1987–2019 (short-term), including country-level breakdowns
<p>Plant Atlas 2020 is the most comprehensive survey of plants (flowering plants, ferns and charophytes) ever undertaken in Britain and Ireland. It is based on over 30 million records, collected mainly by volunteer recorders of the Botanical Society of Britain and Ireland (BSBI) between 2000 and 2019, as well as previous nationwide surveys undertaken in the 1950s and 1990s. This resource provides the data for the long- (1930–2019) and short- term (1987–2019) 10 x 10 km (“hectad”) distribution trends, presented in both the <em>Plant Atlas 2020</em> book (Stroh et al., 2023) and website (www.plantatlas2020.org).</p>
Joint Optimization of Production and Maintenance for Cost-effective Manufacturing and Demand Response Participation Dataset - Machine Breakdown Event
<p>Using the previous dataset at <<a href="https://zenodo.org/record/4106746">https://zenodo.org/record/4106746</a>> an announcement of a machine breakdown event was simulated on Friday at 6:00, describing that machine MAQ119 could breakdown at any moment, detected using a predictive maintenance system. Accordingly, the proposed scheduler imposed a machine available frames constraint, during its event, of 0 usable frames, thus removing the machine from production. The proposed genetic algorithm was executed for 1 hour at period 769 (Friday at 7:00) until the remainder of the schedule’s time window. Also, the predefined optimization weights were 1 for total cost and 0 for machine occupancy deviation.</p> <p> </p> <p>File Description:</p> <ul> <li>Input_JSON_Machine_Breakdown_Optimization - JSON input data for the machine breakdown event</li> <li>Output_JSON_Machine_Breakdown_Optimization - JSON output data for the machine breakdown event</li> <li>Output_Statistics_Machine_Breakdown_Optimization - Excel output machine breakdown event statistics</li> </ul>
Investigating the Role of CNP and CNP aggregates in the Rheological Breakdown of Triglyceride Systems - Supporting Dataset
<p>This dataset contains the files used to substantiate the outcomes of the publication "<em>Investigating the Role of CNP and CNP Aggregates in the Rheological Breakdown of Triglyceride Systems" </em></p> <p>The dataset includes:</p> <ul> <li>X-ray scattering 2D profiles </li> <li>Thixotropy results</li> </ul> <p>Relevant abbreviations: </p> <ul> <li>SSS - Tristearin</li> <li>PPP - Tripalmitin</li> <li>FHRO - Fully Hydrogenated Rapeseed Oil</li> <li>PS - Palm Stearin</li> </ul>
Experimental data of "Magneto-exciton limit of quantum Hall breakdown in graphene"
<p>These files are the measurements presented in A. Schmitt et al. manuscript. AuS2_xxT.csv files are the breakdown measurements with current and noise function of bias. Each file is obtained for a different magnetic field in teslas (T).</p> <p>The low-bias_AuS2.csv file contains all the data for the low bias fan-charts of fig. 1</p>
Data for: Multi-generational fitness effects of natural immigration indicate strong heterosis and epistatic breakdown in a wild bird population
<p><span>The fitness of immigrants and their descendants produced within recipient populations fundamentally underpins the genetic </span><span>and population dynamic</span><span> consequences of immigration. </span><span>I</span><span>mmigrants can </span><span>in principle </span><span>induce contrasting genetic effects on fitness across generations, reflecting multi-faceted additive, dominance, and epistatic effects. Y</span><span>et, full multi-generational and sex-specific fitness effects of regular immigration have not been quantified within naturally structured systems, precluding inference on underlying genetic architectures </span><span>and population outcomes</span><span>. We used four decades of song sparrow </span><span>(<em>Melospiza melodia</em>)</span> <span>life-history and pedigree data to quantify fitness of natural immigrants, natives, and their F1, F2, and backcross descendants, and test for evidence of non-additive genetic effects. Values of key fitness components (including adult lifetime reproductive success and zygote survival) of F1 offspring of immigrant-native matings substantially exceeded their parent mean, indicating strong heterosis. Meanwhile, F2 offspring of F1-F1 matings had notably low values, indicating surprisingly strong epistatic breakdown. Further, magnitudes of effects varied among fitness components, and</span> <span>differed between female</span><span>s</span><span> and male</span><span>s</span><span> descendants. These results demonstrate that strong non-additive genetic effects on fitness can arise within </span><span>weakly </span><span>structured </span><span>and fragmented </span><span>populations </span><span>experiencing </span><span>frequent </span><span>natural </span><span>immigration. </span><span>Such effects will substantially affect the net </span><span>degree of effective gene flow and resulting local genetic introgression and adaptation.</span></p>
Data for: Raman microspectroscopy and laser-induced breakdown spectroscopy for the analysis of polyethylene microplastics in human soft tissues
<p>Data from Raman microspectrometry, LIBS, XRF, and particle sizer analysis supports the findings in the published article named Raman microspectroscopy and laser-induced breakdown spectroscopy to analyze polyethylene microplastics in human soft tissues. The aim of this research is to present the optimized protocol for the detection and analysis of microplastics in biological samples.</p> <p><strong> </strong></p> <p>The tonsil tissue is used for this experiment, and the workflow consists of a few steps: 1. digestion, 2. filtration, 3. analysis. </p> <p>The presented dataset includes the data for verifying the validity of this proposed protocol and the data from clinical experiments done on tonsils where the protocol is applied. We are focusing only on PE microplastics as they are one of the most frequent plastic types in the environment. </p> <p>Firstly, the data from the particle sizer show the size distribution before and after KOH treatment, which is necessary for digestion. We are testing if the particles are not affected by the KOH solution. The data are listed in an Excel sheet where the individual detected PE particle size [µm] and their frequencies [%] are annotated. The data are separated into 2 tables in one sheet - 1st represents data collected before KOH and the 2nd after KOH treatment. </p> <p>To test the limits of our selected systems for microplastic detection, we included the data from Raman and LIBS under the file ‘limitations.’ The different sizes of PE particles, from tens to 1 µm, were analyzed, and the spectra can be retrieved in the folders. The signal intensity can be observed to see the detection limits. For the Raman analysis, the particles were located on the filter. For LIBS, the particles were embedded in epoxy to enable the detection of PE particles in tens of microns. The Raman data are in .txt files and can be opened in any adequate software (Matlab, R, Python, etc.). LIBS data are in specific .libsdata format, which can be opened by LibsAnalyzer software by Lightigo. </p> <p><strong> </strong></p> <p>The clinical experiment was done on tonsil tissue. The tissue was disgusted and filtered. Then, the filters were analyzed. The dataset presents two sample groups: 1. control-native tissue and 2. test-spiked tissue with PE particles. The data from Raman analysis include both, with the aim to confirm the presence of PE particles in the test sample and to exclude the contamination in the control sample. The spectra are again in .txt files. In the case of control, spectra from unclassified particles are presented. For these reasons, the LIBS and XRF were run to exclude the possibility of the presence of polymeric material on the filter of the control sample. The analyzed chemical elements by LIBS for both samples are in the ASC file. Furthermore, individual PE particles were also analyzed on LIBS to obtain reference results for test samples with added PE microplastics. In the case of XRF, data from the empty filter, control, and test samples are included, each in a .txt file. Individual detected chemical elements and their intensities can be retrieved in the tables. </p> <p> </p>
Datasets for Ash et al. (2024): Testing the Breakdown of the Asteroseismic Scaling Relations in Luminous Red Giants
<p>Datasets used for the high-alpha sequence and cluster analysis in Ash et al. (2024) which explores the efficacy of the asteroseismic scaling relations with a focus on the luminous giant regime. These datasets are a subset of the APOKASC3 dataset, which is publiclly available (Pinsonneault et al. (2024)). The data selection methods to genrate these data subsets are available in Ash et al. (2024). The high-alpha sequence and open cluster datasets are used to compare seismic masses computed with various methods to seismic-independent masses. <a href="https://zenodo.org/api/records/14008022/draft/files/NGC6791_APO_giants+rc_GaiaDR3_membership.txt/content" target="_blank" rel="noopener noreferrer">NGC6791_APO_giants+rc_GaiaDR3_membership.txt</a> and <a href="https://zenodo.org/api/records/14008022/draft/files/NGC6819_APO_giants+rc_GaiaDR3_membership.txt/content" target="_blank" rel="noopener noreferrer">NGC6819_APO_giants+rc_GaiaDR3_membership.txt</a> contains asteroseismic data for red clump and red giant branch stars in the open clusters NGC6791 and NGC6819. The <a href="https://zenodo.org/api/records/14008022/draft/files/high_alp_sequence.txt/content" target="_blank" rel="noopener noreferrer">high_alp_sequence.txt</a> file contains asteroseismic data, including the several methods to compute seismic masses, for Milky Way high-alpha sequence stars. </p> <p> </p> <p>APOKASC 3 paper may be found at: https://arxiv.org/abs/2410.00102</p> <p> </p> <p> </p> <p> </p>
Experimental and model data for "Nitrogen oxide production in laser-induced breakdown simulating impacts on the Hadean atmosphere"
<p>This is raw data and supporting figures associated with the publication: Heays, A. N., Kaiserová, T., Rimmer, P. B., Knížek, A., Petera, L., Civiš, S., et al. (2022). Nitrogen oxide production in laser-induced breakdown simulating impacts on the Hadean atmosphere. <em>Journal of Geophysical Research: Planets</em>, 127, e2021JE006842. <a href="https://doi.org/10.1029/2021JE006842">https://doi.org/10.1029/2021JE006842</a></p> <p>Two data files contain model output of the ARGO atmospheric photochemistry code that was used to generate figures for Sec. 3 of the paper:</p> <ul> <li>ARGO_model_data_neutral_case.txt</li> <li>ARGO_model_data_reducing_case.txt</li> </ul> <p>The following data files contain a tabulation of laboratory-measured and modelled photoabsorption spectra as described in Sec. 2 of the paper. The A-G letter-encoding of these files follows Table 1 of the paper, and the spectral ranges correspond to the strongest bands of NO, N2O, and NO2. </p> <ul> <li>laboratory_spectrum_experiment_A_species_N2O.txt</li> <li>laboratory_spectrum_experiment_A_species_NO2.txt</li> <li>laboratory_spectrum_experiment_A_species_NO.txt</li> <li>laboratory_spectrum_experiment_B_species_N2O.txt</li> <li>laboratory_spectrum_experiment_B_species_NO2.txt</li> <li>laboratory_spectrum_experiment_B_species_NO.txt</li> <li>laboratory_spectrum_experiment_C_species_N2O.txt</li> <li>laboratory_spectrum_experiment_C_species_NO2.txt</li> <li>laboratory_spectrum_experiment_C_species_NO.txt</li> <li>laboratory_spectrum_experiment_D_species_N2O.txt</li> <li>laboratory_spectrum_experiment_D_species_NO2.txt</li> <li>laboratory_spectrum_experiment_D_species_NO.txt</li> <li>laboratory_spectrum_experiment_E_species_N2O.txt</li> <li>laboratory_spectrum_experiment_E_species_NO2.txt</li> <li>laboratory_spectrum_experiment_E_species_NO.txt</li> <li>laboratory_spectrum_experiment_F_species_N2O.txt</li> <li>laboratory_spectrum_experiment_F_species_NO2.txt</li> <li>laboratory_spectrum_experiment_F_species_NO.txt</li> <li>laboratory_spectrum_experiment_G_species_N2O.txt</li> <li>laboratory_spectrum_experiment_G_species_NO2.txt</li> <li>laboratory_spectrum_experiment_G_species_NO.txt</li> </ul> <p>The following file contains a tabulation of the full-spectral-range laboratory-measured photoabsorption spectrum of experiment A, along with a modelled spectrum.</p> <ul> <li><a href="https://zenodo.org/api/files/49f05962-9a34-4bbc-855c-1a0976f62531/laboratory_spectrum_experiment_A_full_spectrum.txt?versionId=79a70ade-63d1-4fd7-b423-176e27f8dc37">laboratory_spectrum_experiment_A_full_spectrum.txt </a></li> </ul> <p>The following file contains plots of the experimental spectra for all NxOy species in all measurements as well as the residual error of models fit to these spectra. Additional residual errors of model neglecting NxOy species indicates their contribution to the spectra.</p> <ul> <li>laboratory_spectrum_figures.pdf</li> </ul> <p> </p>
Evidence of hybrid breakdown among invasive hybrid cattails (Typha x glauca)
<p>Interspecific hybridization has varied consequences for offspring fitness, with implications for the maintenance of species integrity. Hybrid vigour, when it occurs, can peak in first-generation (F<sub>1</sub>) hybrids and then decline in advanced-generation (F<sub>2</sub>+) hybrids. This hybrid breakdown, together with the processes affecting patterns of hybridization and hybrid fitness, determine the evolutionary stability of hybrid zones. An extensive hybrid zone in North America involving the cattails <em>Typha latifolia, T. angustifolia</em>, and their invasive hybrid <em>T</em>. × <em>glauca</em> is characterized by hybrid vigour among F<sub>1</sub>s, but the fitness of advanced-generation hybrids has not been studied. We compared seed germination and plant growth of <em>T. latifolia </em>(parental L), F<sub>1</sub> <em>T</em>. × <em>glauca</em> (F<sub>1</sub>), hybrid backcrosses to <em>T</em>. <em>angustifolia</em> (bcA) and <em>T</em>. <em>latifolia</em> (bcL), and advanced-generation (F<sub>2</sub>) hybrids. Consistent with expectations under hybrid breakdown, we found reduced plant growth for F<sub>2</sub> hybrids in comparison with F<sub>1</sub>s (plant height and above-ground biomass) and parental Ls (above-ground biomass). Backcrossed hybrids had intermediate measures of plant growth and bcLs were characterized by reduced seed germination in comparison with parental Ls. Hybrid breakdown could make the formation of F<sub>1</sub>s in North America finite because (1) hybridization among cattails is asymmetric, with <em>T</em>. <em>angustifolia</em> but not <em>T</em>. <em>latifolia</em> subject to genetic swamping, and (2) <em>T</em>. <em>angustifolia</em> is less common and subject to competitive displacement by F<sub>1</sub>s. Hybrid breakdown is therefore expected to reduce hybrid frequencies over time, contributing to the long-term maintenance of T<em>.</em> <em>latifolia</em> – the only native cattail in the study region.</p>
Reproductive data Fagus sylvatica: Widespread masting breakdown in beech
<p>Climate change effects on tree reproduction are poorly understood even though the resilience of populations relies on sufficient regeneration to balance increasing rates of mortality. Forest-forming tree species often mast, i.e. reproduce through synchronised year-to-year variation in seed production, which improves pollination and reduces seed predation. Recent observations in European beech show, however, that current climate change can dampen interannual variation and synchrony of seed production, and that this masting breakdown drastically reduces the viability of seed crops. Importantly, it is unclear under which conditions masting breakdown occurs, and how widespread breakdown is in this pan-European species. Here, we analysed 50 long-term datasets of population-level seed production, sampled across the distribution of European beech, and identified increasing summer temperatures as the general driver of masting breakdown. Specifically, increases in site-specific mean maximum temperatures during June and July were observed across most of the species range, while the interannual variability of population-level seed production (CVp) decreased. The declines in CVp were greatest where temperatures increased most rapidly. Additionally, the occurrence of crop failures and low-seed years has decreased during the last four decades, signalling altered starvation effects of masting on seed predators. Notably, CVp did not vary among sites according to site mean summer temperature. Instead, masting breakdown occurs in response to warming local temperatures (i.e. increasing relative temperatures), such that the risk is not restricted to populations growing in warm average conditions. As lowered CVp can reduce viable seed production despite the overall increase in seed count, our results warn that a covert mechanism is underway that may hinder the regeneration potential of European beech under climate change, with great potential to alter forest functioning and community dynamics.</p>
Propagation, dissipation and breakdown in quantum anomalous Hall edge states probed by microwave edge plasmons
<p>Here we upload the raw data from the manuscript entitled “Propagation, dissipation and breakdown in quantum anomalous Hall edge states probed by microwave edge plasmons ”, by T. Röper, H. Thomas, D. Rosenbach, A. Uday, G. Lippertz, A. Denis, P. Morfin, A.A. Taskin, Y. Ando and E. Bocquillon. We provide Jupyter notebooks to load, process, and plot all results. The datasets contain measurements on 4 devices. Each device has its own Jupyter notebook. The necessary Python packages are listed in the file called "requirements.txt". <br><br><br></p>
Analysis of heritage stones and model wall paintings by pulsed laser excitation of Raman, laser-induced fluorescence and laser-induced breakdown spectroscopy signals with a hybrid system
<p>Analysis of heritage stone samples, alabaster, gypsum, limestone and marble, and model wall paintings was carried out with a laboratory, hybrid system based on the pulsed laser excitation of Raman, laser-induced fluorescence and laser-induced breakdown spectroscopy signals. The system is based on a nanosecond Q-switched Nd:YAG laser operating at its second (532 nm), third (355 nm) and fourth (266 nm) harmonics and a spectrograph coupled to a time-gated intensified charge coupled device for spectral analysis allowing detection with temporal resolution. For the stone samples, Raman spectra display the characteristic vibration modes of SO<sub>4</sub><sup>2-</sup> of calcium sulfate, in alabaster and gypsum, and of free CO<sub>3</sub><sup>2- </sup>of calcium carbonate, in limestone and marble. Simultaneously acquired laser-induced fluorescence spectra reveal characteristic bands that help to distinguish between heritage stone types. The elemental composition of stone samples is obtained by laser-induced breakdown spectroscopy upon excitation at 355 nm. Spectra of all stone samples reveal their elemental composition that includes Ca, Na, Mn and Sr and the presence of molecular species, such as CN, C<sub>2</sub> and CaO. Additional emission lines, ascribed to Mg, Si, Al and K, appear with different intensities according to the nature of the stone material. Model wall paintings, based on a red pigment, prepared as fresco or mixed with two different binders, were also studied. The complementary information provided by the three spectroscopic modes allows the identification of the pigment as red vermillion and of the different preparations based on the pigment alone or in mixtures with linseed oil and egg yolk binders.</p>
MD trajectories for "Communication Breakdown: Dissecting the COM Interfaces between the Subunits of Nonribosomal Peptide Synthetases"
<p>This dataset contains Amber MD trajectories for the MD simulations described in the manuscript "Communication Breakdown: Dissecting the COM Interfaces between the Subunits of Nonribosomal Peptide Synthetases" by Christopher D. Fage, Simone Kosol, Matthew Jenner, Carl Öster, Angelo Gallo, Milda Kaniusaite, Roman Steinbach, Michael Staniforth, Vasilios G. Stavros, Mohamed A. Marahiel, Max J. Cryle, and Józef R. Lewandowski published in ACS Catalysis (<a href="https://doi.org/10.1021/acscatal.1c02113">https://doi.org/10.1021/acscatal.1c02113</a>). If you use these data please cite the original manuscript (follow the manuscript DOI for the final citation, which was not available at the time of publishing this data set). </p> <p>To reduce their size the trajectories were stripped of water and ions. Only frames every 1 ns or 5 ns were saved. Please see the Supporting Information of the source manuscript for the conditions for the simulations. </p>
De novo modelling of HEV replication polyprotein: Five-domain breakdown and involvement of flexibility in functional regulation - DATASET
<p>All models used for the paper "De novo modelling of HEV replication polyprotein: Five-domain breakdown and involvement of flexibility in functional regulation".</p>
Field-Plated D3MOSFET design for breakdown voltage improvement
<p>This dataset contains the raw data used for the following article published in Diamond & Related Materials (available here : <a href="https://doi.org/10.1016/j.diamond.2023.109827">10.1016/j.diamond.2023.109827</a>)</p> <p><strong>Field-Plated D3MOSFET design for breakdown voltage improvement</strong></p> <p>Authors : <em>Marine Couret, Damien Michez, Juliette Letelllier, Anne Castelan, Julien Pernot, Nicolas Rouger</em></p> <p> </p>
R codes from: Breakdown of the growth–mortality trade-off along a soil phosphorus gradient in diverse neotropical forest
<p><span>An ecological paradigm predicts that plant species adapted to low resource availability grow slower and live longer than those adapted to high resource availability when growing together. We tested this by using hierarchical Bayesian analysis to quantify variations in growth and mortality of ~ 40,000 individual trees from > 400 species in response to limiting resources in the tropical forests of Panama. In contrast to theoretical expectations of the growth–mortality paradigm, we find that tropical tree species restricted to low-phosphorus soils simultaneously achieve faster growth rates and lower mortality rates than species restricted to high-phosphorus soils. This result demonstrates that adaptation to phosphorus limitation in diverse plant communities modifies the growth–mortality trade-off, with important implications for understanding long-term ecosystem dynamics.</span></p>
Data and code from: Breakdown in seasonal dynamics of subtropical ant communities with land-cover change
<p><span>Concerns about widespread human-induced declines in insect populations are mounting, yet little is known about how land-use change modifies the dynamics of insect communities, particularly in understudied regions. Here, we examine how the seasonal activity patterns of ants—key drivers of terrestrial ecosystem functioning—vary with anthropogenic land-cover change on a subtropical island landscape, and whether differences in temperature or species composition can explain observed patterns. Using trap captures sampled biweekly over two years from a biodiversity monitoring network covering Okinawa Island, Japan, we processed 1.2 million individuals and reconstructed activity patterns within and across habitat types. Forest communities exhibited greater temporal variability of activity than those in more developed areas. Using time-series decomposition to deconstruct this pattern, we found that sites with greater human development exhibited ant communities with diminished seasonality, reduced synchrony, and higher stochasticity compared to sites with greater forest cover. Our results cannot be explained by variation in regional or site temperature patterns, or by differences in species richness or composition among sites. Our study raises the possibility that disruptions to natural seasonal patterns of functionally key insect communities may comprise an important and underappreciated consequence of global environmental change that must be better understood across Earth's biomes.</span></p>
Datasets for Morphological and Spectral Characterization of Lunar Regolith Breakdown due to Water Ice
<p>Remote sensing observations of the Moon suggest that the lunar polar regolith environment is affected by several natural processes that may cause the regolith in these regions to become more porous and fine particulate. One of these processes may be the mechanical breakdown of regolith particles through the interaction of water ice and regolith by frost wedging. We present morphological and spectral analyses of high-fidelity lunar regolith simulants LHS-1 (lunar highlands simulant-1) and LMS-1 (lunar mare simulant-1) that have been exposed to varying concentrations of water ice (1, 10, and 30 wt%) over extended periods of time (1, 3, and 6 months) to evaluate the extent at which lunar regolith may be weathered by ice-regolith interactions in the Moon’s polar regions. To characterize changes in regolith particle morphology, we explored grain size and shape parameters with the CILAS ExpertShape suite and characterized the abundance and evolution of clinging fines with scanning electron microscopy (SEM) and energy dispersive x-ray spectroscopy (EDS). Reflectance spectra were taken from 1.0 – 22.5 µm (444.4 - 10,000 cm<sup>-1</sup>) to characterize any differences in spectral features that may occur as a result of regolith breakdown. Both the morphological and spectral investigations display trends that show simulant particle degradation as a function of composition, increasing water concentration, and freezing time. Our study demonstrates that the lunar regolith is susceptible to mechanical breakdown in the presence of water ice and that water ice is likely a contributor to the weathering environment within permanently shadowed regions on the lunar surface.</p> <p>This dataset contains all spectra, SEM images, and ExpertShape images/results used to conduct this work.</p>
Data pertaining to the published article "Quantitative T1 mapping detects blood-brain barrier breakdown in apparently non-enhancing multiple sclerosis lesions" by Donatelli et al., 2023.
<p>Data pertaining to the published article "Quantitative T1 mapping detects blood-brain barrier breakdown in apparently non-enhancing multiple sclerosis lesions" by Donatelli et al., NeuroImage: Clinical (2023). </p><p>PMID: <strong>37717382; </strong>PMCID: <a href="http://www.ncbi.nlm.nih.gov/pmc/articles/pmc10514220/">PMC10514220</a>; DOI: <a href="https://doi.org/10.1016/j.nicl.2023.103509">10.1016/j.nicl.2023.103509</a></p>
ScienceDex guides
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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.