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5 results for “Catalog of Life”
Early-life human gut metagenome-assembled genomes and proteins catalogs
<p>The description of the files:</p> <p>(1) The 32,277 genomes include six parts: ELGG_part_1.zip, ELGG_part_2.zip, ELGG_part_3.zip, ELGG_part_4.zip, ELGG_part_5.zip, ELGG_part_6.zip.</p> <p>(2) The 2,172 representative species: ELGG_representatives_2172.zip.</p> <p>(3) The ELGP catalog clustered at 95% amino acid identity: ELGP_95.faa.gz.</p> <p> </p>
Catalogue of Life: Catalog of Life for DH (20 Feb 2019 dump)
<p></p>https://eol-jira.bibalex.org/browse/TRAM-803 Data sets for the assembly of the EOL dynamic hierarchy.
Catalogue of Life: Catalog of Life Extract for DH (TRAM-797)
CoL with the following branches removed: Viruses (using ICTV), Bacteria, Archaea, Chromista, Protozoa (using NCBI + WoRMS + CoL Protist Extract), Aves (using IOC), Amphibia (using ASW), Odonata (using WOL), Bombycoidea (using Kitching et al. 2018), Anthelidae (now Bombycoidea), Onychophora (using Oliveira et al. 2012), Phthiraptera (duplicates Psocodea Species File data). Data sets for the assembly of the EOL dynamic hierarchy.
Catalogue of Life: Catalog of Life Protists
CoL Ciliophora, Oomycota, Polycystina, Eccrinida, Microsporidia, Mycetozoa, Chaetocerotaceae, Naviculaceae branches. Data sets for the assembly of the EOL dynamic hierarchy.
Catalogue of Life: Catalog of Life Protists (20 Feb 2019 dump)
<p></p>https://eol-jira.bibalex.org/browse/TRAM-803 Data sets for the assembly of the EOL dynamic hierarchy.
ScienceDex guides
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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.