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33
datasets available to search
ShareScore release 0.9.0
Dataset results
33 results for “Ceratopteris”
Ceratopteris richardii (Parkeriaceae) - unspecified - unspecified
Image of Ceratopteris richardii (Parkeriaceae) - unspecified - unspecified
Ceratopteris richardii (Parkeriaceae) - unspecified - unspecified
Image of Ceratopteris richardii (Parkeriaceae) - unspecified - unspecified
Ceratopteris richardii (Parkeriaceae) - unspecified - unspecified
Image of Ceratopteris richardii (Parkeriaceae) - unspecified - unspecified
Ceratopteris richardii (Parkeriaceae) - unspecified - unspecified
Image of Ceratopteris richardii (Parkeriaceae) - unspecified - unspecified
Ceratopteris richardii (Parkeriaceae) - unspecified - unspecified
Image of Ceratopteris richardii (Parkeriaceae) - unspecified - unspecified
Ceratopteris richardii (Parkeriaceae) - unspecified - unspecified
Image of Ceratopteris richardii (Parkeriaceae) - unspecified - unspecified
Ceratopteris richardii (Parkeriaceae) - unspecified - unspecified
Image of Ceratopteris richardii (Parkeriaceae) - unspecified - unspecified
Ceratopteris richardii (Parkeriaceae) - unspecified - unspecified
Image of Ceratopteris richardii (Parkeriaceae) - unspecified - unspecified
Ceratopteris richardii (Parkeriaceae) - unspecified - unspecified
Image of Ceratopteris richardii (Parkeriaceae) - unspecified - unspecified
Ceratopteris richardii (Parkeriaceae) - unspecified - unspecified
Image of Ceratopteris richardii (Parkeriaceae) - unspecified - unspecified
Ceratopteris richardii (Parkeriaceae) - unspecified - unspecified
Image of Ceratopteris richardii (Parkeriaceae) - unspecified - unspecified
Ceratopteris richardii (Parkeriaceae) - unspecified - unspecified
Image of Ceratopteris richardii (Parkeriaceae) - unspecified - unspecified
Ceratopteris richardii (Parkeriaceae) - unspecified - unspecified
Image of Ceratopteris richardii (Parkeriaceae) - unspecified - unspecified
Ceratopteris richardii (Parkeriaceae) - whole plant - unspecified
Image of Ceratopteris richardii (Parkeriaceae) - whole plant - unspecified
Ceratopteris richardii (Parkeriaceae) - unspecified - unspecified
Image of Ceratopteris richardii (Parkeriaceae) - unspecified - unspecified
Ceratopteris richardii (Parkeriaceae) - unspecified - unspecified
Image of Ceratopteris richardii (Parkeriaceae) - unspecified - unspecified
Proteome of the Ceratopteris richardii fern (strain Hn-n)
<p>Proteome derived from de novo transcriptome assembly from fronds, mature gametophytes and spores of Ceratopteris richardii Hn-n strain. Transcriptome is deposited at <a href="https://www.ebi.ac.uk/ena/data/view/PRJEB33372">https://www.ebi.ac.uk/ena/data/view/PRJEB33372</a></p> <p>After removing low-quality reads (reads lacking all four nucleotides or with a no-call), we assembled transcripts with Velvet (version 1.2.06) and Oases (version 0.2.06) using each of five k-mer values (k=45, 55, 65, 75, 85). Also, we converted the .fastq file to a non-redundant .fasta file and performed separate de novo transcriptome assembly with k=35, 45, 55, 65, and 75. Assembled transcripts were combined for each tissue, then redundant or fragmented sequences were removed based on BLASTN analysis. We determined the translational reading frame and corresponding peptide sequences from each assembled transcript based on BLASTP mapping results (after 6-frame translation in silico) to four plant reference proteome databases (Creinhardtii_169, Osativa_193_pep, Smoellendorffii_91_pep, TAIR10). Sequences lacking significant BLASTP scores to the reference proteomes were considered to be non-coding and omitted from the resulting fern proteome database. The resulting protein sequences derived from the three tissues were combined and a non-redundant protein sequence set computed based on clustering with UCLUST (version 4.2.66), requiring >97% amino acid identity. The supporting code is available from the NuevoTx repository (https://github.com/taejoonlab/NuevoTx). </p> <p>This proteome was assembled for "A pan-plant protein complex map reveals deep conservation and novel assemblies"</p> <p> </p> <p> </p>
FIGURE 3 in Ceratopteris baguangensis (Pteridaceae), a new species of Ceratopteris from Guangdong, China
FIGURE 3. Chromosome number of Ceratopteris baguangensis in mitotic root-tip cells. (A) Metaphase chromosome of the tetraploid, 2n = 154 or 156; (B) Lined drawing of Figure A.
FIGURE 5 in Ceratopteris baguangensis (Pteridaceae), a new species of Ceratopteris from Guangdong, China
FIGURE 5. Phylogeny of Ceratopteris baguangensis based on the sequences of rbcL, the intergenic spacer regions of trnL (UAA)-trnF (GAA), rbcL-atpB, psbC-trnS (UGA), and trnW (CCA)-trnP (UGG) by using Bayesian inference (BI). Number on the branch represents the support values.
FIGURE 2. Ceratopteris baguangensis F. G in Ceratopteris baguangensis (Pteridaceae), a new species of Ceratopteris from Guangdong, China
FIGURE 2. Ceratopteris baguangensis F. G. Wang & Zi Xiang Li. a. Mature plant; b. Face of sterile fronds; c. Back of sterile fronds; d. Face of fertile fronds; e. Back of fertile fronds; f. Enlarged fertile frond anatomy/portion for sporangium; g. Spore; Drawn by Yunxiao Liu.
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