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Dataset results
23 results for “Ceratopteris richardii”
Ceratopteris richardii (Parkeriaceae) - unspecified - unspecified
Image of Ceratopteris richardii (Parkeriaceae) - unspecified - unspecified
Ceratopteris richardii (Parkeriaceae) - unspecified - unspecified
Image of Ceratopteris richardii (Parkeriaceae) - unspecified - unspecified
Ceratopteris richardii (Parkeriaceae) - unspecified - unspecified
Image of Ceratopteris richardii (Parkeriaceae) - unspecified - unspecified
Ceratopteris richardii (Parkeriaceae) - unspecified - unspecified
Image of Ceratopteris richardii (Parkeriaceae) - unspecified - unspecified
Ceratopteris richardii (Parkeriaceae) - unspecified - unspecified
Image of Ceratopteris richardii (Parkeriaceae) - unspecified - unspecified
Ceratopteris richardii (Parkeriaceae) - unspecified - unspecified
Image of Ceratopteris richardii (Parkeriaceae) - unspecified - unspecified
Ceratopteris richardii (Parkeriaceae) - unspecified - unspecified
Image of Ceratopteris richardii (Parkeriaceae) - unspecified - unspecified
Ceratopteris richardii (Parkeriaceae) - unspecified - unspecified
Image of Ceratopteris richardii (Parkeriaceae) - unspecified - unspecified
Ceratopteris richardii (Parkeriaceae) - unspecified - unspecified
Image of Ceratopteris richardii (Parkeriaceae) - unspecified - unspecified
Ceratopteris richardii (Parkeriaceae) - unspecified - unspecified
Image of Ceratopteris richardii (Parkeriaceae) - unspecified - unspecified
Ceratopteris richardii (Parkeriaceae) - unspecified - unspecified
Image of Ceratopteris richardii (Parkeriaceae) - unspecified - unspecified
Ceratopteris richardii (Parkeriaceae) - unspecified - unspecified
Image of Ceratopteris richardii (Parkeriaceae) - unspecified - unspecified
Ceratopteris richardii (Parkeriaceae) - unspecified - unspecified
Image of Ceratopteris richardii (Parkeriaceae) - unspecified - unspecified
Ceratopteris richardii (Parkeriaceae) - whole plant - unspecified
Image of Ceratopteris richardii (Parkeriaceae) - whole plant - unspecified
Ceratopteris richardii (Parkeriaceae) - unspecified - unspecified
Image of Ceratopteris richardii (Parkeriaceae) - unspecified - unspecified
Ceratopteris richardii (Parkeriaceae) - unspecified - unspecified
Image of Ceratopteris richardii (Parkeriaceae) - unspecified - unspecified
Proteome of the Ceratopteris richardii fern (strain Hn-n)
<p>Proteome derived from de novo transcriptome assembly from fronds, mature gametophytes and spores of Ceratopteris richardii Hn-n strain. Transcriptome is deposited at <a href="https://www.ebi.ac.uk/ena/data/view/PRJEB33372">https://www.ebi.ac.uk/ena/data/view/PRJEB33372</a></p> <p>After removing low-quality reads (reads lacking all four nucleotides or with a no-call), we assembled transcripts with Velvet (version 1.2.06) and Oases (version 0.2.06) using each of five k-mer values (k=45, 55, 65, 75, 85). Also, we converted the .fastq file to a non-redundant .fasta file and performed separate de novo transcriptome assembly with k=35, 45, 55, 65, and 75. Assembled transcripts were combined for each tissue, then redundant or fragmented sequences were removed based on BLASTN analysis. We determined the translational reading frame and corresponding peptide sequences from each assembled transcript based on BLASTP mapping results (after 6-frame translation in silico) to four plant reference proteome databases (Creinhardtii_169, Osativa_193_pep, Smoellendorffii_91_pep, TAIR10). Sequences lacking significant BLASTP scores to the reference proteomes were considered to be non-coding and omitted from the resulting fern proteome database. The resulting protein sequences derived from the three tissues were combined and a non-redundant protein sequence set computed based on clustering with UCLUST (version 4.2.66), requiring >97% amino acid identity. The supporting code is available from the NuevoTx repository (https://github.com/taejoonlab/NuevoTx). </p> <p>This proteome was assembled for "A pan-plant protein complex map reveals deep conservation and novel assemblies"</p> <p> </p> <p> </p>
Ceratopteris richardii - effects of male gametophyte experience on conversion time
Open the record for dataset details and reuse information.
Ribosomal heterogeneity revealed by a spatial transcriptomics in the water fern Ceratopteris richardii
GEO Series GSE307951. Ceratopteris richardii. 1 samples. Type: Other.
Transcriptional analysis of Ceratopteris richardii young sporophyte reveals conservation of stem cell factors in the root apical meristem
GEO Series GSE207873. Ceratopteris richardii. 9 samples. Type: Expression profiling by high throughput sequencing.
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