Find research datasets worth reusing
Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.
5
datasets available to search
ShareScore release 0.9.0
Dataset results
5 results for “Chemotion”
Chemotion ELN Erklärvideos
<p><strong>Chemotion ELN Erklärvideos</strong></p> <p>Chemotion<sup>[1]</sup> ist ein Open-Source-System für die Speicherung und Verwaltung von Experimenten und Moleküldaten in der Chemie und deren angrenzenden Wissenschaften. Dabei besteht das System hauptsächlich aus zwei Komponenten: dem elektronischen Laborjournal (<em>electronic laboratory notebook</em>, ELN) Chemotion ELN<sup>[2]</sup> zur Eintragung und Auswertung von Experimenten und deren Analytik-Daten und dem Chemotion-Repositorium<sup>[3,4]</sup> zur Veröffentlichung dieser. Durch die Verknüpfung des ELNs mit dem Repositorium können Einträge einfach aus dem Laborbuch transferiert werden. Daten werden inklusive ihrer maschinenlesbaren Metadaten in dem Repositorium unter Open-Access-Bedingungen veröffentlicht und erfüllen somit die FAIR-Data-Prinzipien (<em>findable, accessible, interoperable, reusable</em>).<sup>[5]</sup> Diese dienen als Grundlage für nachhaltiges Datenmanagement im Rahmen der guten wissenschaftlichen Praxis.<sup>[6]</sup></p> <p>Zur Nutzung von Chemotion und zur Erläuterung der grundlegenden Funktionen haben wir Erklärvideos erstellt, die Neulingen den Einstieg in das ELN erleichtern sollen. Diese Videos umfassen wichtige Themen von der Erstellung von Molekülen, über die Auswertung von Analytik-Daten, bis hin zum Teilen von Einträgen. Die Videos sind dabei in verschiedene Themenblöcke aufgeteilt und befassen sich jeweils mit konkreten Funktionen. Die Struktur der Themenblöcke und Videos können dem PDF-Dokument in diesem Zenodo-Eintrag entnommen werden. Wir bitten zu beachten, dass grau hinterlegte Videos in diesem Dokument erst in späteren Versionen des Eintrags zur Verfügung stehen werden.</p> <p><strong>Chemotion ELN Erklärvideos auf YouTube</strong></p> <p>Die Erklärvideos gibt es zusätzlich auch auf Chemotions YouTube Channel: <a href="https://www.youtube.com/playlist?list=PL1AonKd9WAd8n8YPXxMaGLQ5ad8PdR3OC">https://www.youtube.com/playlist?list=PL1AonKd9WAd8n8YPXxMaGLQ5ad8PdR3OC</a></p> <p><strong>Danksagung</strong></p> <p>Die Autoren danken Nicole Jung für weiterführende Erklärungen zu den Funktionen von Chemotion und die Hilfe bei der Erstellung und Überarbeitung der Videos. Weiterhin danken die Autoren Anna Manukânc für die Hilfe bei der konzeptionellen Entwicklung der Videos.</p> <p><strong>Literatur</strong></p> <p>[1] Chemotion. <a href="https://chemotion.net/">https://chemotion.net/</a> (accessed 02/19/2023).</p> <p>[2] Tremouilhac, P., Nguyen, A., Huang, Y.-C., Kotov, S., Lütjohann, D. S., Hübsch, F., Jung, N., Bräse, S., <em>J. Cheminform. </em><strong>2017,</strong> <em>9</em>, 54.</p> <p>[3] Tremouilhac, P., Lin, C.-L., Huang, P.-C., Huang, Y.-C., Nguyen, A., Jung, N., Bach, F., Ulrich, R., Neumair, B., Streit, A., Bräse, S., <em>Angew. Chem. Int. Ed. </em><strong>2020,</strong> <em>59</em>, 22771-22778; <em>Angew. Chem. </em><strong>2020,</strong> <em>132</em>, 22960-22968.</p> <p>[4] Tremouilhac, P., Huang, P.-C., Lin, C.-L., Huang, Y.-C., Nguyen, A., Jung, N., Bach, F., Bräse, S., <em>Chemistry–Methods </em><strong>2021,</strong> <em>1</em>, 8-11.</p> <p>[5] Wilkinson, M. D., Dumontier, M., Aalbersberg, I. J., Appleton, G., Axton, M., Baak, A., Blomberg, N., Boiten, J.-W., da Silva Santos, L. B., Bourne, P. E., Bouwman, J., Brookes, A. J., Clark, T., Crosas, M., Dillo, I., Dumon, O., Edmunds, S., Evelo, C. T., Finkers, R., Gonzalez-Beltran, A., Gray, A. J. G., Groth, P., Goble, C., Grethe, J. S., Heringa, J., ’t Hoen, P. A. C., Hooft, R., Kuhn, T., Kok, R., Kok, J., Lusher, S. J., Martone, M. E., Mons, A., Packer, A. L., Persson, B., Rocca-Serra, P., Roos, M., van Schaik, R., Sansone, S.-A., Schultes, E., Sengstag, T., Slater, T., Strawn, G., Swertz, M. A., Thompson, M., van der Lei, J., van Mulligen, E., Velterop, J., Waagmeester, A., Wittenburg, P., Wolstencroft, K., Zhao, J., Mons, B., <em>Sci. </em><em>Data </em><strong>2016,</strong> <em>3</em>, 160018.</p> <p>[6] Deutsche Forschungsgemeinschaft. <em>Guidelines for Safeguarding Good Research Practice. Code of Conduct</em>. <strong>2019</strong>, <a href="https://doi.org/10.5281/zenodo.3923602">https://doi.org/10.5281/zenodo.3923602</a>.</p> <p><strong>Nützliche Links</strong></p> <p>Chemotion. <a href="https://chemotion.net/">https://chemotion.net/</a> (accessed 02/19/2023).</p> <p>Chemotion ELN Documentation. <a href="https://chemotion.net/docs/eln/">https://chemotion.net/docs/eln/</a> (accessed 02/19/2023).</p> <p>Chemotion Repository. <a href="https://www.chemotion-repository.net/welcome">https://www.chemotion-repository.net/welcome</a> (accessed 03/14/2022).</p> <p>Molecule Archive of the Compound Platform. <a href="https://compound-platform.eu/home">https://compound-platform.eu/home</a> (accessed 03/14/2022).</p>
Chemotion ELN Instruction Videos
<p><strong>Chemotion ELN Instruction Videos</strong></p> <p>Chemotion<sup>[1]</sup> is an open source system for storing and managing experiments and molecular data in chemistry and its related sciences. The system mainly consists of two components: the electronic laboratory notebook (ELN) Chemotion ELN<sup>[2]</sup> for recording and evaluating experiments and their analytical data, and the Chemotion repository<sup>[3,4]</sup> for publishing these data. As the ELN is linked to the repository, entries can be easily transferred from the lab journal to the repository. Data, including their machine-readable metadata, are published in the repository under open access conditions and thus fulfill the FAIR data principles (findable, accessible, interoperable, reusable).<sup>[5]</sup> These principles serve as a foundation for sustainable data management within the framework of good scientific practice.<sup>[6]</sup></p> <p>For the use of Chemotion and to explain its basic functions, we created explanatory videos to help newcomers getting started with the ELN. These videos cover important topics from creating molecules, to evaluating analytic data, to sharing entries. The videos are divided into different topic blocks and deal in each case with specific functions. The structure of the topic blocks and videos is provided in the PDF document in this Zenodo entry. Please note that entries with a gray background in this document will only be available in later versions of the Zenodo entry.</p> <p><strong>Chemotion ELN Instruction Videos on YouTube</strong></p> <p>Find the instruction videos additionally on Chemotion's YouTube channel: <a href="https://www.youtube.com/playlist?list=PL1AonKd9WAd8cDjzXGiNu0ndoctNu0izs">https://www.youtube.com/playlist?list=PL1AonKd9WAd8cDjzXGiNu0ndoctNu0izs</a></p> <p><strong>Acknowledgement</strong></p> <p>First and foremost, the authors would like to thank Nicole Parks for recording the English audio tracks. The authors are grateful to Nicole Jung for further explanations of Chemotion's features and help in creating and revising the videos. Furthermore, the authors would like to thank Anna Manukânc for her help with the conceptual development of the videos.</p> <p><strong>Literature</strong></p> <p>[1] Chemotion. <a href="https://chemotion.net/">https://chemotion.net/</a> (accessed 02/19/2023).</p> <p>[2] Tremouilhac, P., Nguyen, A., Huang, Y.-C., Kotov, S., Lütjohann, D. S., Hübsch, F., Jung, N., Bräse, S., <em>J. Cheminform. </em><strong>2017,</strong> <em>9</em>, 54.</p> <p>[3] Tremouilhac, P., Lin, C.-L., Huang, P.-C., Huang, Y.-C., Nguyen, A., Jung, N., Bach, F., Ulrich, R., Neumair, B., Streit, A., Bräse, S., <em>Angew. Chem. Int. Ed. </em><strong>2020,</strong> <em>59</em>, 22771-22778; <em>Angew. Chem. </em><strong>2020,</strong> <em>132</em>, 22960-22968.</p> <p>[4] Tremouilhac, P., Huang, P.-C., Lin, C.-L., Huang, Y.-C., Nguyen, A., Jung, N., Bach, F., Bräse, S., <em>Chemistry–Methods </em><strong>2021,</strong> <em>1</em>, 8-11.</p> <p>[5] Wilkinson, M. D., Dumontier, M., Aalbersberg, I. J., Appleton, G., Axton, M., Baak, A., Blomberg, N., Boiten, J.-W., da Silva Santos, L. B., Bourne, P. E., Bouwman, J., Brookes, A. J., Clark, T., Crosas, M., Dillo, I., Dumon, O., Edmunds, S., Evelo, C. T., Finkers, R., Gonzalez-Beltran, A., Gray, A. J. G., Groth, P., Goble, C., Grethe, J. S., Heringa, J., ’t Hoen, P. A. C., Hooft, R., Kuhn, T., Kok, R., Kok, J., Lusher, S. J., Martone, M. E., Mons, A., Packer, A. L., Persson, B., Rocca-Serra, P., Roos, M., van Schaik, R., Sansone, S.-A., Schultes, E., Sengstag, T., Slater, T., Strawn, G., Swertz, M. A., Thompson, M., van der Lei, J., van Mulligen, E., Velterop, J., Waagmeester, A., Wittenburg, P., Wolstencroft, K., Zhao, J., Mons, B., <em>Sci. </em><em>Data </em><strong>2016,</strong> <em>3</em>, 160018.</p> <p>[6] Deutsche Forschungsgemeinschaft. <em>Guidelines for Safeguarding Good Research Practice. Code of Conduct</em>. <strong>2019</strong>, <a href="https://doi.org/10.5281/zenodo.3923602">https://doi.org/10.5281/zenodo.3923602</a>.</p> <p><strong>Useful Links</strong></p> <p>Chemotion. <a href="https://chemotion.net/">https://chemotion.net/</a> (accessed 02/19/2023).</p> <p>Chemotion ELN Documentation. <a href="https://chemotion.net/docs/eln/">https://chemotion.net/docs/eln/</a> (accessed 02/19/2023).</p> <p>Chemotion Repository. <a href="https://www.chemotion-repository.net/welcome">https://www.chemotion-repository.net/welcome</a> (accessed 02/13/2023).</p> <p>Molecule Archive of the Compound Platform. <a href="https://compound-platform.eu/home">https://compound-platform.eu/home</a> (accessed 02/13/2023).</p>
Study of Magrolimab (Hu5F9-G4) in Combination With Avelumab in Solid Tumor Participants and Checkpoint-Inhibitor-Naive Ovarian Cancer Participants Who Progress Within 6 Months of Prior Platinum Chemot
ClinicalTrials.gov study NCT03558139. IPD Sharing: NO. Countries: 1. Publications: 0.
Pembrolizumab in Treating Patients With Hormone Receptor Positive, Localized Inflammatory Breast Cancer Who Are Receiving Hormone Therapy and Did Not Achieve a Pathological Complete Response to Chemot
ClinicalTrials.gov study NCT02971748. IPD Sharing: Not stated. Countries: 1. Publications: 0.
Treatment With [90]Y-Ibritumomab Tiuxetan Versus no Treatment in Patients With Follicular Non Hodgkin Lymphoma (Stage III or IV) Having Achieved a Partial or Complete Remission After First Line Chemot
ClinicalTrials.gov study NCT00185393. IPD Sharing: Not stated. Countries: 13. Publications: 0.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.