Find research datasets worth reusing
Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.
22
datasets available to search
ShareScore release 0.9.0
Dataset results
22 results for “Collybiopsis”
Fig. 1 in Proposal of Korean names for newly updated Collybiopsis species
Fig. 1. Basidiomata of 16 Collybiopsis species in Korea. A, Co. albicantipes (SFC20180704-86); B, Co. biformis (SFC20180704-36); C, Co. clavicystidiata (SFC20180705-26); D, Co. confluens (SFC20190731-48); E, Co. dichroa (SFC20180712-16); F, Co. fulva (KA15-0210); G, Co. koreana (SFC20120821-84); H, Co. luxurians (SFC20190731-18); I, Co. menehune (SFC20180905-33); J, Co. nonnulla (KA15-0129); K, Co. orientisubnuda (SFC20180830-29); L, Co. polygramma (SFC20170807-35); M, Co. ramealis (NIBRFG0000508888); N, Co. subumbilicata (SFC20140701-03); O, Co. undulata (SFC20120821-04); P, Co. vellerea (SFC20140821-29).
FIGURE 2 in Collybiopsis baiyunensis sp. nov. (Omphalotaceae, Agaricales) from Baiyun Mountain, Southern China
FIGURE 2. Collybiopsis baiyunensis sp. nov.: a–g. Basidiomata (a–b: K17050311; c: GDGM93885, holotype; d–e: GDGM93884; f: GDGM93886; g: GDGM93887) Scale bar: a–g = 1 cm. Photos by L.H. Qiu and X.C. Liu.
FIGURE 1 in Collybiopsis baiyunensis sp. nov. (Omphalotaceae, Agaricales) from Baiyun Mountain, Southern China
FIGURE 1. Maximum likelihood phylogenetic tree generated from the combined ITS + nrLSU dataset. ML-BS ≥ 70 % and BI-PP ≥ 0.95 are shown above or below the branches. New species is indicated with an asterisk.
FIGURE 3 in Collybiopsis baiyunensis sp. nov. (Omphalotaceae, Agaricales) from Baiyun Mountain, Southern China
FIGURE 3. Microscopic features of Collybiopsis baiyunensis sp. nov.: a. Basidiospores; b. Basidia; c. Cheilocystidia; d. Stipitipellis showing caulocystidia; Scale bar: a–c = 10 μm; d = 20 μm. Drawings by X.C. Liu.
FIGURE 8 in Five new records of Collybiopsis (Agaricales, Omphalotaceae) in Thailand: a significant addition to the species diversity and global distribution of the genus
FIGURE 8. Collybiopsis nonnulla (BKF10189). A. Basidiomata; B. Basidiospores; C. Basidia; D. Cheilocystidia; E. Pileipellis; F. Caulocystidia. Scale bars: A = 10 mm; B–D, F = 10 µm; E = 20 µm.
FIGURE 7 in Five new records of Collybiopsis (Agaricales, Omphalotaceae) in Thailand: a significant addition to the species diversity and global distribution of the genus
FIGURE 7. Collybiopsis melanopus (SDBR-CMUWP072).A. Basidiomata; B. Basidiospores; C. Basidia; D. Cheilocystidia; E. Pileipellis; F. Caulocystidia. Scale bars: A = 10 mm; B–F = 10 µm.
FIGURE 4 in Five new records of Collybiopsis (Agaricales, Omphalotaceae) in Thailand: a significant addition to the species diversity and global distribution of the genus
FIGURE 4. Collybiopsis gibbosa (SDBR-CMUWP051). A. Basidiomata; B. Basidiospores; C. Basidia; D. Cheilocystidia; E. Pileipellis. Scale bars: A = 10 mm; B–E = 10 µm.
FIGURE 3 in Five new records of Collybiopsis (Agaricales, Omphalotaceae) in Thailand: a significant addition to the species diversity and global distribution of the genus
FIGURE 3. Phylogenetic tree derived from maximum likelihood analysis of 95 ITS gene sequences. (Continued)
FIGURE 5 in Five new records of Collybiopsis (Agaricales, Omphalotaceae) in Thailand: a significant addition to the species diversity and global distribution of the genus
FIGURE 5. Collybiopsis indocta (SDBR-TSU027). A. Basidiomata; B. Basidiospores; C. Basidia; D. Cheilocystidia; E. Pileipellis; F. Caulocystidia. Scale bars: A = 10 mm, B–F = 10 µm.
FIGURE 3 in Five new records of Collybiopsis (Agaricales, Omphalotaceae) in Thailand: a significant addition to the species diversity and global distribution of the genus
FIGURE 3. Phylogenetic tree derived from maximum likelihood analysis of 95 ITS gene sequences. Sequences of Rhodocollybia maculata TFB14382 and R. butyracea TFB13989 were used as outgroups. The numbers above the branches represent bootstrap percentages (left) and posterior probabilities (right). Bootstrap values ≥ 75% and posterior probabilities ≥ 0.90 are shown. The scale bar represents the expected number of nucleotide substitutions per site. Sequences of specimen vouchers obtained in this study are highlighted in red. Type species are shown in bold.
FIGURE 6 in Five new records of Collybiopsis (Agaricales, Omphalotaceae) in Thailand: a significant addition to the species diversity and global distribution of the genus
FIGURE 6. Collybiopsis menehune (SDBR-TSU012). A. Basidiomata; B. Basidiospores; C. Basidia; D. Cheilocystidia; E. Pileipellis; F. Caulocystidia. Scale bars: A = 10 mm; B–D, F = 10 µm; E = 5 µm.
FIGURE 2 in Five new records of Collybiopsis (Agaricales, Omphalotaceae) in Thailand: a significant addition to the species diversity and global distribution of the genus
FIGURE 2. Phylogenetic tree derived from maximum likelihood analysis of 95 sequences of the combined ITS and nrLSU genes. (Continued)
FIGURE 2 in Five new records of Collybiopsis (Agaricales, Omphalotaceae) in Thailand: a significant addition to the species diversity and global distribution of the genus
FIGURE 2. Phylogenetic tree derived from maximum likelihood analysis of 95 sequences of the combined ITS and nrLSU genes. Sequences of Rhodocollybia maculata TFB14382 and R. butyracea TFB13989 were used as outgroups. The numbers above the branches represent bootstrap percentages (left) and posterior probabilities (right). Bootstrap values ≥ 75% and posterior probabilities ≥ 0.90 are shown. The scale bar represents the expected number of nucleotide substitutions per site. Sequences of specimen vouchers obtained in this study are highlighted in red. Type species are shown in bold.
FIGURE 1 in Collybiopsis bambusicola sp. nov. in Yunnan Province, Southwestern China
FIGURE 1. Phylogeny of Collybiopsis by ML analyses based on combined ITS + nLSU sequences. Branches are labeled with maximum likelihood bootstrap ≥50 % and Bayesian posterior probabilities ≥0.90, respectively. New species are indicated in bold.
Collybiopsis pakistanica (Omphalotaceae, Agaricales, Basidiomycota), a new mushroom species from Margalla Hills, Pakistan, and two new combinations
<p><span>A new species, <em>Collybiopsis</em> <em>pakistanica</em>, from Margalla Hills National Park, Pakistan, is described based on micro-morphological and molecular phylogenetic analyses. This species is characterized by </span><span>its </span><span>milky white pileus, yellowish orange or light yellow to orange at central disc and margins, </span><span>lacrymoid </span><span>basidiospores, </span><span>cheilocystidia with median construction, and broadly utriform and clavate to narrowly utriform pleurocystidia and </span><span>epithelioid hymeniderm</span><span> pileipellis. </span><span>Its placement as a new taxon of <em>Collybiopsis</em> is confirmed by phylogenetic analyses of ITS and nrLSU sequences. Two new combinations, <em>Collybiopsis</em> <em>ugandensis</em> and <em>Collybiopsis</em> </span><span><em>pleurocystidiata</em> </span><span>are also proposed as these species are transferred from </span><em><span>Gymnopus</span></em><span>.</span></p>
Collybiopsis pakistanica (Omphalotaceae, Agaricales, Basidiomycota), a new mushroom species from Margalla Hills, Pakistan, and two new combinations
Open the record for dataset details and reuse information.
Supplementary material 2 from: Kim JS, Cho Y, Park KH, Park JH, Kim M, Kim CS, Lim YW (2022) Taxonomic study of Collybiopsis (Omphalotaceae, Agaricales) in the Republic of Korea with seven new species. MycoKeys 88: 79-108. https://doi.org/10.3897/mycokeys.88.79266
Figure S2
Supplementary material 3 from: Kim JS, Cho Y, Park KH, Park JH, Kim M, Kim CS, Lim YW (2022) Taxonomic study of Collybiopsis (Omphalotaceae, Agaricales) in the Republic of Korea with seven new species. MycoKeys 88: 79-108. https://doi.org/10.3897/mycokeys.88.79266
Figure S3
Supplementary material 1 from: Kim JS, Cho Y, Park KH, Park JH, Kim M, Kim CS, Lim YW (2022) Taxonomic study of Collybiopsis (Omphalotaceae, Agaricales) in the Republic of Korea with seven new species. MycoKeys 88: 79-108. https://doi.org/10.3897/mycokeys.88.79266
Figure S1
FIGURE 1 in Five new records of Collybiopsis (Agaricales, Omphalotaceae) in Thailand: a significant addition to the species diversity and global distribution of the genus
FIGURE 1. Worldwide distribution of Collybiopsis species.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.