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88 results for “Data Scope”
Dataset for ELGO-DIMITRA Data Management Practices & Requirements: A Scoping Report
<p>This is a comprehensive data repository of the <em>data management survey</em> carried out in Autumn of 2023 through a collaboration between the <a href="https://opensciencestudies.eu/">PHIL_OS</a> project and the <a href="https://agres.elgo.gr/">Research Directorate of the Hellenic Agricultural Organization ELGO-DIMITRA</a>.</p> <p>Please cite as: </p> <blockquote> <p>Tsiroukis F., Leonelli S. and ELGO-DIMITRA (2024) <em>Dataset for ELGO-DIMITRA Data Management Practices & Requirements: A Scoping Report.</em> PHIL_OS Report. DOI: 10.5281/zenodo.14003418</p> </blockquote>
KM2209 SCOPE-PARAGON-2 CTD data
<p>The 2022 SCOPE-PARAGON-II research expedition was a coordinated effort to characterize particle dynamics and remineralization in the upper 500 m of the North Pacific Subtropical Gyre. Despite the importance of particles as key sites of biological activity in an otherwise dilute seawater medium, there remain major gaps in our understanding of the specific processes and organisms controlling particle transformations. The 2022 SCOPE-PARAGON-II cruise was directed towards understanding the processes and rates of biological particulate matter transformations (e.g., production, decomposition, sinking) as well as the ecological interactions that occur in association with suspended and sinking particles. These targeted studies of particle dynamics at Station ALOHA leveraged ongoing ecological and biogeochemical modeling efforts in SCOPE. Time stamps are in UTC.</p>
Data from "PathOS - D1.2 Scoping Review of Open Science Impact"
<p>This dataset contains the data from the Scoping Review of Open Science Impact. Included are all record for which we assessed the full-text.</p> <p>The columns are as follows:</p> <ul> <li>id: Internal identifier</li> <li>Several metadata columns from Scopus/Web of Science: authors, year, title, abstract, type, DOI</li> <li>OS type: type of Open Science (e.g., Open Access, Citizen Science)</li> <li>inclusion_status: included, duplicate, out of scope, non-english</li> <li>justification: reasons for decision on inclusion_status</li> <li>Several columns with data extracted by the authors: Study details and design, Types of data sources, Study aims, Relevance to which aspect of impact, Key findings, Coverage/Context, Confidence assessment</li> </ul> <p>A complete description of the methods and detailed instructions for coders for extracting data from reports is contained in section 2 of the deliverable report which is available at <a href="https://doi.org/10.5281/zenodo.7883699">https://doi.org/10.5281/zenodo.7883699</a>.</p>
Seq-Scope Mouse Colon Data 1st-seq (GSE266556)
<p>This repository contains the 1st-seq FASTQ files for the mouse colon data deposited in GEO with accession number GSE266556. For Seq-Scope 1st-seq data, it is important to obtain the original readname in order to resolve the spatial coordinates of each HDMI barcode. Although the 1st-seq FASTQ files are already deposited in SRA using the accession numbers associated with GSE266556, it may be difficult to retrieve the original readnames. Therefore, here we are (re-)depositing the FASTQ files containing the original readname for the convenience of users who need access to the original unmodified sequence data. </p>
Data relating to Clyne et al. Quality, scope and reporting standards of randomised controlled trials in Irish Health Research: an observational study
<p>Data relating to the study reported in the paper "Quality, scope and reporting standards of randomised controlled trials in Irish Health Research: an observational study".</p>
Data for "What have biological records ever done for us? A systematic scoping review"
<p>These files contain data used in "What have biological records ever done for us? A systematic scoping review" (Gaul et al. 2020). </p>
Supplementary Data - MORTALITY RATE DUE TO PULMONERY FIBROSIS ASSOCIATED WITH SARS- COV-2 INFECTION: SCOPE OF BEST FIT REGRESSION
<p>The dataset contains number of infected pateints - Death Frquencies - Mortality rate globally due to pulmonary fibrosis associated with SARS-COV-2 infection with effect from 21st Jan to 28 th April ,2020 . Data analysis report by best fit regression software Curve Expert V.1.4 supported with Spreadsheet ( Excel , Office 2007 ) are included for computation of statistical significance .</p>
Supporting Data for: Information Retrieval Interfaces in Virtual Reality - A Scoping Review Focused on Current Generation Technology
<p>This is the full data set of all reviewed research items obtained from Google Scholar, Web of Science and Scopus for the Scoping Literature Review <em><a href="https://doi.org/10.1371/journal.pone.0246398">Information Retrieval Interfaces in Virtual Reality - A Scoping Review Focused on Current Generation VR technology</a>.</em></p>
A scoping review on bovine tuberculosis highlights the need for novel data streams and analytical approaches to curb zoonotic diseases
<p>The following data and scripts are part of the manuscript titled 'A scoping review on bovine tuberculosis highlights the need for novel data streams and analytical approaches to curb zoonotic diseases' which is currently going through the peer-review process and has already been published as a preprint. Please read the README.txt file for information on the files uploaded.</p>
CGM Scoping Review Data Repository
<p>This dataset represents the data extracted as part of a CGM-based biological feedback scoping review.</p>
Social Innovations for Circularity in the Built Environment – a Scoping Review and Classification. Supplementary Data to the Bibliometric Review.
<p>To transition the built environment (BE) towards circularity, i.e., maximizing the time resources spend in the BE, thus minimizing negative environmental impacts of resource usage, social innovations (SI) – understood as new ways of doing, organizing, framing, and knowing – are just as important as technological advancements. This article provides an overview of the state of the knowledge regarding SI that contribute to circularity in the BE, and proposes a framework for coherently classifying such SI in terms of their main categories and effects.</p> <p>To identify and understand the current knowledge regarding social innovations (SI) that contribute to circularity in the built environment (BE), a bibliometric review of scientific literature is conducted. It shows that the term social innovation is not frequently used in this contexts although the buzzwords circularity and circular economy are themselves often framed as SI. To assess the characteristics and contribution of SI to circularity in the BE, a scoping review that includes grey literature into the context was conducted and a framework developed to classify predominant SI using concepts from transition studies as well as the systems thinking approach. The framework is designed to help assess the potential of SI and to identify research and/or action gaps. Key findings are (1) There is a broad diversity of SIs that contribute to circularity in the BE already in the focus of research, although they are not always identified as such; (2) Most SI focus on either the design or the demolition phase (i.e., market related phases), whereas user-centered SI are less frequently discussed; and (3) It is crucial to also consider potential sustainability goal conflicts in order to guide policies that address SI as a solution.</p> <p>These datasets are the basis to the bibliometric literature review.</p>
KM2112 SCOPE-PARAGON-1 CTD data
<table> <tbody> <tr> <td>The 2021 SCOPE-PARAGON research expedition was a coordinated effort to characterize particle dynamics and remineralization in the upper 500 m of the North Pacific Subtropical Gyre. Despite the importance of particles as key sites of biological activity in an otherwise dilute seawater medium, there remain major gaps in our understanding of the specific processes and organisms controlling particle transformations. The 2021 SCOPE-PARAGON cruise was directed towards understanding the processes and rates of biological particulate matter transformations (e.g., production, decomposition, sinking) as well as the ecological interactions that occur in association with suspended and sinking particles. These targeted studies of particle dynamics at Station ALOHA leveraged ongoing ecological and biogeochemical modeling efforts in SCOPE. Time stamps are in UTC.</td> </tr> </tbody> </table>
TN412 SCOPE-Gradients-5 CTD data
<p>The SCOPE-Gradients program was designed to test conceptual and mathematical models of biogeochemical organization across the transition zone between different ecosystems. The studies were grounded by three hypotheses derived from ecological theory and manifested by the Darwin ecosystem model output. 1) Optimal supply ratios of fixed nitrogen and iron result in enhanced productivity across the transition zone. 2) The size distribution of organisms (PSD) across the transition zone are predictable under steady state conditions. 3) Trends in elemental and macro-molecular composition of primary producers will vary predictably across the transition zone. We employed a suite of interdisciplinary sampling strategies on process cruises transecting across the North Pacific subtropical gyre, the transition zone and into the subpolar gyres in order to determine whether the theory underlying our models and driving hypotheses are sufficiently robust to predict in situ observations.</p>
Data archive for "Modified rice bran arabinoxylan as a nutraceutical in health and disease — A scoping review with bibliometric analysis"
<p>v1.0.0 Release with the publication of the paper on PLoS One</p> <p>Ooi, S. L., Micalos, P. S., & Pak, S. C. (2023). Modified rice bran arabinoxylan as a nutraceutical in health and disease—A scoping review with bibliometric analysis. PLOS ONE, 18(8), e0290314. https://doi.org/10.1371/journal.pone.0290314</p> <p><strong>Full Changelog</strong>: https://github.com/sooi10/RBACScoping/commits/NetworkAnalysis</p>
Research data for a scoping review on circular cities
<p>This dataset includes the research data used in a scoping review of the social impacts associated with a transition to circular cities. The dataset is a supplement to the article "The lack of social impact considerations in transitioning towards urban circular economies: a scoping review", which was published in the Sustainable Cities and Society journal (<a href="https://doi.org/10.1016/j.scs.2021.103394">https://doi.org/10.1016/j.scs.2021.103394</a>).</p>
Data Extraction table summarizing studies in the scoping review on co-creation of patient education materials
<p>Data extraction table for scoping review on best practices for co-creating patient-facing educational materials</p>
Data set for "Quantitative and Qualitative bibliometric scope toward the Synthesis of Rose Oxide as a Natural Product in perfumery"
<p>This is the bibliometric data for "Quantitative and Qualitative bibliometric scope toward the Synthesis of Rose Oxide as a Natural Product in perfumery" study which were derived from SCOPUS database, on 23<sup>rd</sup> September 2019, based on title search.</p>
Dataset for: Research data management in academic institutions: a scoping review
<p><strong>Overview</strong></p> <p>This dataset contains the raw data for the manuscript: <br> Perrier L, Blondal E, Ayala AP, Dearborn D, Kenny T, Lightfoot D, Reka R, Thuna M, Trimble L, MacDonald H. Research data management in academic institutions: A scoping review. PLOS One. 2017 May 23;12(5):e0178261. doi: 10.1371/journal.pone.0178261.</p> <p>Full-text available at: <a href="http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0178261 ">http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0178261 </a></p> <p><strong>Data and Documentation Files</strong> </p> <p>Five files make up the dataset: </p> <ol> <li>Data Dictionary: RDMScopingReview_DataDictionary.pdf</li> <li>Data Abstraction Sheet: RDMScopingReview_StudyCharacteristics.csv</li> <li>Data Abstraction Sheet: RDMScopingReview_Setting.csv</li> <li>Data Abstraction Sheet: RDMScopingReview_DataCollectionTools.csv</li> <li>Data Abstraction Sheet: RDMScopingReview_Outcomes.csv</li> </ol> <p>Contact: Laure Perrier: <a href="https://orcid.org/0000-0001-9941-7129">orcid.org/0000-0001-9941-7129</a></p>
Extended Data for "A Scoping Review of Infertility Research conducted in the Republic of Ireland"
<p><span>This dataset contains the following files:</span></p> <p><span><span>·<span> </span></span></span><span>Extended Data 1: Changes to Methodology from Protocol</span></p> <p><span><span>·<span> </span></span></span><span>Extended Data 2: List of Included Documents (n=105); List of Potentially Relevant Studies that were not Located (n=8)</span></p> <p><span><span>·<span> </span></span></span><span>Extended Data 3: Data Extraction Table</span></p> <p><span><span>·<span> </span></span></span><span>Extended Data 4: Completed PRISMA ScR Checklist</span></p> <p><span>These files comprise extended data for the paper: </span></p> <p><span><span>Earley, A., O’Dea, A., Madden, C., O’Connor, P., Byrne, D., Murphy, AW., & Lydon, S (2024). </span><span>A Scoping Review of Infertility Research conducted in the Republic Of Ireland. <em>Under review</em>.</span></span></p> <p> </p>
Supplemental data for: A scoping review of studies on ruscism
<p><span>The supplementary materials accompanying the paper: "A scoping review of studies on ruscism". These materials include: raw data from citation databases, table for quantitative analysis of imported bibliographic data, key topics and content analysis of publications, python code. These supplementary materials are intended to enhance the usability of the research data, allowing for in-depth secondary analyses and aiding scholars in conducting related studies.</span></p>
ScienceDex guides
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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.