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ShareScore release 0.9.0
Dataset results
7 results for “Domain of validity”
The conductivity profile of Earth-ionosphere cavity used in the paper "Finite-difference time-domain analysis of ELF radio wave propagation in the spherical Earth-ionosphere waveguide and its validation based on analytical solutions" by Volodymyr Marchenko, Andrzej Kulak, Janusz Mlynarczyk
<p>The file "Marchenko_FDTD_Paper_Conductivity_Profile.dat" contains the conductivity profile of Earth-ionosphere cavity. The first column provides the altitude (in km) and the second column provides the conductivity (in S/m).</p>
Data file with manuscript titled 'A Structurally Validated Sequence Alignment of 497 Human Protein Kinase Domains'
<p>The files used in different analysis reported in the manuscript titled - 'A Structurally-Validated Multiple Sequence Alignment of 497 Human Protein Kinase Domains' are shared at two locations. Following is a brief description of these files.</p> <p>Location - https://github.com/DunbrackLab/Kinases<br> 1. HMM profile files - HMM files for each of the nine groups computed separately labeled as Groupname.hmm, like AGC.hmm<br> 2. HMM profile file - HMM file computed from the full alignment including all the sequences - Human-PK.hmm<br> 3. Score files - HMM scores of each kinase sequence against all the groupwise HMMs both for iteration1 (HMM-iter1-scores-tables.txt) and iteration2 (HMM-iter1-scores-tables.txt)<br> 4. Jalview session file - Kinase alignment with sequences colored by secondary structure information from PDB file if the structure is known; or predicted secondary structure if the experimental structure is not known. The file could be opened in Jalview - kinases-PDB-SSPred.jvp</p> <p>Location - https://zenodo.org/record/3445533<br> 1. The file contains list of residue pairs aligned in pairwise structural alignments of 272 human protein kinases which were used as a benchmark in the study. The alignments were created by FATCAT and optimized by SE program.</p>
Validation of huntingtin domain protein samples mass spectrometry and aggregation assays 20170130
<p>Open lab notebook huntingtin structure function project.<br> </p>
Comparison between Parma Polyhedra Library and ParetoLib for computing the validity domain of a parametric Signal Temporal Logic (STL) expression
<p>Comparison between Parma Polyhedra Library and ParetoLib for computing the validity domain of a parametric Signal Temporal Logic (STL) expression. The code and dataset in this folder is related to the example 5 in section 2 of paper "Mining of Extended Signal Temporal Logic Specifications with ParetoLib 2.0" in the journal Formal Methods and System Design.</p>
Input Files and Processed Results for FreeMHD: validation and verification of the open-source, multi-domain, multi-phase solver for electrically conductive flows
<p><strong>Input Files (StartingFiles.zip) and Processed Results (FreeMHDPaperAllFigures.zip) used to make paper figures. </strong></p> <p> </p> <p>FreeMHD: validation and verification of the open-source, multi-domain, multi-phase solver for electrically conductive flows</p> <p><em>The extreme heat fluxes in the divertor region of tokamaks may require an alternative to solid plasma-facing components, for the extraction of heat and the protection of the surrounding walls. Flowing liquid metals are proposed as an alternative, but raise additional challenges that require investigation and numerical simulations. Free surface designs are desirable for plasma-facing components (PFCs), but steady flow profiles and surface stability must be ensured to limit undesirable interactions with the plasma. Previous studies have mainly used steady-state, 2D, or simplified models for internal flows and have not been able to adequately model free-surface liquid metal (LM) experiments. Therefore, FreeMHD has been recently developed as an open-source magnetohydrodynamics (MHD) solver for free-surface electrically conductive flows subject to a strong external magnetic field. The FreeMHD solver computes incompressible free-surface flows with multi-region coupling for the investigation of MHD phenomena involving fluid and solid domains. The model utilizes the finite-volume OpenFOAM framework under the low magnetic Reynolds number approximation. FreeMHD is validated using analytical solutions for the velocity profiles of closed channel flows with various Hartmann numbers and wall conductance ratios. Next, experimental measurements are then used to verify FreeMHD, through a series of cases involving dam breaking, 3D magnetic fields, and free-surface LM flows. These results demonstrate that FreeMHD is a reliable tool for the design of LM systems under free surface conditions at the reactor scale. Furthermore, it is flexible, computationally inexpensive, and can be used to solve fully 3D transient MHD flows.</em></p>
Longitudinal Family/Molecular Genetic Study to Validate Research Domain Criteria
ClinicalTrials.gov study NCT02415647. IPD Sharing: Not stated. Countries: 1. Publications: 10.
The Validity of Retinal Blood Flow Measurements During Hyperoxia in Humans Using Fourier Domain Color Doppler Optical Coherence Tomography (CDOCT)
ClinicalTrials.gov study NCT00431600. IPD Sharing: Not stated. Countries: 1. Publications: 0.
ScienceDex guides
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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.