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ShareScore release 0.9.0
Dataset results
2 results for “Drosophila willistoni”
Drosophila willistoni genome annotation
<p>Genome annotation of Drosophila willistoni de novo assembly using long reads. Protein coding genes were predicted with Funannotate. This software aligned proteins and transcripts from the Drosophila willistoni Flybase annotation against the assembly using minimap2, diamond and exonerate. It processed these hints to be included by augustus when predicting protein coding genes.</p> <p>LncRNAs were identified by FEELnc using stranded ribodepleted RNA-seq libraries from ovaries, testes, male accessory glands and whole body samples. Additional lncRNAs were identified by mapping lncRNAs sequences downloaded from RNA central identified for Drosophila willistoni.</p> <p>Ribosomal RNAs were predicted with RNAmmer; tRNAs, with tRNAscan2; and other miscellaneous ncRNA, with cmsearch and Rfam models.</p>
Sex-biased expression in Drosophila willistoni
GEO Series GSE31723. Drosophila willistoni. 8 samples. Type: Expression profiling by high throughput sequencing.
ScienceDex guides
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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.