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700 results for “Dynamical model”
Long-term heat demand scenarios under climate change utilising a stochastic dynamic building stock model: Morphed hourly outdoor temperatures for Jyvaskyla for 2030 and 2050
<p>******************* Please view the README.txt or README.md file for detailed documentation of data. ********************</p> <p>Title: Long-term heat demand scenarios under climate change utilising a stochastic dynamic building stock model: Morphed hourly outdoor temperatures for Jyväskylä for 2030 and 2050</p> <p>Date of release: 25/11/2020</p> <p>Identifier: 10.5281/zenodo.4275759</p> <p>Permalink: http://dx.doi.org/10.5281/zenodo.4275759</p> <p>Associated publication: Hietaharju, P.; Louis, J.-N.; Pulkkinen, J.; Ruusunen, M. Long-term heat demand scenarios under climate change utilising a stochastic dynamic building stock model, <strong><em>Under Review</em></strong>, 2020.</p> <p>Suggested citation: Please reference the associated publication above when using any datasets or materials described in the README.txt and README.md files.</p> <p><br> Contact information: Jari Pulkkinen, University of Oulu, Oulu, Finland, jari.pulkkinen@oulu.fi; Jean-Nicolas Louis, University of Oulu, Oulu, Finland, jean-nicolas.louis@oulu.fi<br> </p> <p>Dates of data: 2030, 2050</p> <p>Type of data: Outdoor Temperature</p> <p>Geographic location: Jyväskylä</p> <p>Time resolution: hourly, full year</p> <p>Format: All data is stored in .csv files</p> <p>Number of files: 1 .zip --> 50 files + README.txt + README.md</p> <p>This directory contains the following datasets: A summary of all the files has been compiled and stored in the "README.txt" and "README.md" files</p> <p> </p> <p>Notifications:</p> <p>Contains modified Copernicus Climate Change Service (C3S) information [2018] and modified Finnish Meteorological Institute [2017,2019] information from etsin.fairdata.fi and from Open data repository (https://en.ilmatieteenlaitos.fi/open-data).</p> <p><br> Contains modified Climate One Building information [2019] (reference Lawrie L.K. and Crawley D.B. 2019) and Test Reference Year 2012 (TRY2012) information from Jylhä et al. [2011] and Jylhä et al. [2015] (Energy demand for the heating and cooling of residential houses in Finland in a changing climate).</p> <p>Contains modified Ruosteenoja et al. [2016] information.</p> <p>Other data and information sources are described in README.txt, README.md, references and on the associated publication.</p>
Modelling pan-Arctic peatland carbon dynamics under alternative warming scenarios
<p>The purpose of this study is to simulate peatland carbon dynamics in the future climate conditions for four major future warming scenarios. The study examines whether less pronounced warming could further enhance the peatland carbon sink capacity and buffer the effects of climate change. It will also determine which trajectory peatland carbon balance will follow, what the main drivers are and which one will dominate in the future.</p> <p>In this study, LPJGUESS Peatland has been employed across the pan-Arctic and we carried out four sets of simulations. The data files contain the information about carbon accumulation, NEE, NPP and ice fraction.</p>
Life cycle inventories for the article: Circular Battery Production in the EU: Insights from integrating Life Cycle Assessment into System Dynamics Modeling on Recycled Content and Environmental Impacts
<p>This repository provides the unregionalized life cycle inventories to the paper "<span>Ginster, R.</span>, <span>Blömeke, S.</span>, <span>Popien, J. L.</span>, <span>Scheller, C.</span>, <span>Cerdas, F.</span>, <span>Herrmann, C.</span>, & <span>Spengler, T. S.</span> (<span>2024</span>). <span>Circular battery production in the EU: Insights from integrating life cycle assessment into system dynamics modeling on recycled content and environmental impacts</span>. <em>Journal of Industrial Ecology</em>, <span>1</span>–<span>18</span>. <a href="https://doi.org/10.1111/jiec.13527">https://doi.org/10.1111/jiec.13527</a>".</p> <h2>Contents</h2> <p>The repository is split into 2 parts and comprises the following files:</p> <p><strong>01_production: </strong>contains the necessary life cycle inventories for battery production.</p> <ul> <li><strong>01_primary</strong>: contains the life cycle inventories for battery production from primary materials.</li> <li><strong>02_secondary</strong>: contains the life cycle inventories for battery production from secondary materials.</li> <li><strong>03_active_material</strong>: contains the life cycle inventories for the active battery materials from primary materials.</li> <li><strong>04_active_material</strong>: contains the life cycle inventories for the active battery materials from secondary materials.</li> </ul> <p> </p> <p><strong>02_recycling: </strong>contains the necessary inventories for battery recycling.</p> <ul> <li><strong>01_process</strong>: contains the life cycle inventories for battery recycling.</li> <li><strong>02_intermediate</strong>: contains the life cycle inventories for the intermediate system for battery recycling.</li> <li><strong>03_output</strong>: contains the life cycle inventories for the resulting substances from battery recycling.</li> </ul> <h2>Summary</h2> <p>These files allow to reproduce the results of our study. Each file contains the life cycle inventory of one distinct battery capacity (20, 45, 68, 85, 95, 100 kWh) with a specific cell chemistry (LFP, NCA, NMC333, NMC532, NMC622, NMC811, NMC955) for battery production (based on Knehr et al. 2022) or for battery recycling (based on Blömeke et al. 2023).</p> <h2>Related publication</h2> <p>More details on the scientific context is provided in the publication itself:</p> <p><span>Ginster, R.</span>, <span>Blömeke, S.</span>, <span>Popien, J. L.</span>, <span>Scheller, C.</span>, <span>Cerdas, F.</span>, <span>Herrmann, C.</span>, & <span>Spengler, T. S.</span> (<span>2024</span>). <span>Circular battery production in the EU: Insights from integrating life cycle assessment into system dynamics modeling on recycled content and environmental impacts</span>. <em>Journal of Industrial Ecology</em>, <span>1</span>–<span>18</span>. <a href="https://doi.org/10.1111/jiec.13527">https://doi.org/10.1111/jiec.13527</a></p> <h2>Funding</h2> <p>This publication (Raphael Ginster and Steffen Blömeke) was created within the Research Training Group CircularLIB, supported by the Ministry of Science and Culture of Lower Saxony with funds from the program zukunft.niedersachsen of the Volkswagen Foundation (MWK | ZN3678).</p> <p>The publication on which this dataset is based were funded by the German Federal Ministry of Education and Research within the Competence Cluster Recycling & Green Battery (greenBatt) under the grant numbers 03XP0302A (Christian Scheller) and 03XP0331A (Jan-Linus Popien). The authors are responsible for the contents of this publication.</p>
Topic Labels of "Dynamic Topic Modelling for Exploring the Scientific Literature on Coronavirus: An Unsupervised Labelling Technique"
<p>These are the labels generated with the method proposed in the article <em>"Dynamic Topic Modelling for Exploring the Scientific Literature on Coronavirus: An Unsupervised Labelling Technique".</em> These labels are for the 100 and 200 DTM topic models, trained both with the whole corpus and with only the COVID-19 period data </p> <p> </p> <p>For the generation of these labels you can go to the original published work or to the linked Zenodo resource.</p>
Simulations from the LPJmL3.5 dynamic global vegetation model for the Vegetation Carbon Turnover Intercomparison
<p>Outputs from the LPJmL3.5 dynamic global vegetation model are provided for two global simulations. One forced by CRU-NCEP v5 climate data for the period 1901-2014 and one forced by bias-corrected IPSL-CM5A-LR RCP 8.5 climate data for the period 1901-2099. Only potential natural vegetation was simulated, i.e. no human land-use. Both simulations are at 0.5 x 0.5 degree spatial resolution. Carbon turnover fluxes for live vegetation for each individual turnover-causing process in the model were outputted individually. For a full description of the simulations, please refer to the accompanying paper.</p>
Simulations from the ORCHIDEE dynamic global vegetation model for the Vegetation Carbon Turnover Intercomparison
<p>Outputs from the ORCHIDEE dynamic global vegetation model are provided for two global simulations. One forced by CRU-NCEP v5 climate data for the period 1901-2014 and one forced by bias-corrected IPSL-CM5A-LR RCP 8.5 climate data for the period 1901-2099. Only potential natural vegetation was simulated, i.e. no human land-use. Both simulations are at 0.5 x 0.5 degree spatial resolution. Carbon turnover fluxes for live vegetation for mortality, leaf phenological turnover and fine root phenological turnover were outputted individually. For a full description of the simulations, please refer to the accompanying paper.</p>
Simulations from the JULES dynamic global vegetation model for the Vegetation Carbon Turnover Intercomparison
<p>Outputs from the JULES dynamic global vegetation model are provided for two global simulations. One forced by CRU-NCEP v5 climate data for the period 1901-2014 and one forced by bias-corrected IPSL-CM5A-LR RCP 8.5 climate data for the period 1901-2099. Only potential natural vegetation was simulated, i.e. no human land-use. Both simulations are at 1.875 x 1.25 degree spatial resolution. Carbon turnover fluxes for live vegetation for each individual turnover-causing process in the model were outputted individually. For a full description of the simulations, please refer to the accompanying paper.</p>
Simulations from the LPJ-GUESS dynamic global vegetation model v3.0 for the Vegetation Carbon Turnover Intercomparison
<p>Outputs from the LPJ-GUESS dynamic global vegetation model v3.0 are provided for two global simulations. One forced by CRU-NCEP v5 climate data for the period 1901-2014 and one forced by bias-corrected IPSL-CM5A-LR RCP 8.5 climate data for the period 1901-2099. Only potential natural vegetation was simulated, i.e. no human land-use. Both simulations are at 0.5 x 0.5 degree spatial resolution. Carbon turnover fluxes for live vegetation for mortality, leaf phenological turnover and fine root phenological turnover were outputted individually. For a full description of the simulations, please refer to the accompanying paper.</p>
Investigating dynamics between energy use and socio-demographic characteristics in spatial modeling of residential energy consumption
<p>Files represent datasets (2017 Residential Building Stock Assessment and American Community Survey 2012-2017 5-year estimate) and R-code associated with the analysis. </p>
Model data for Sequential Dynamics of Stearoyl-CoA Desaturase /Ligand Binding and Unbinding Mechanism: A Computational Study by Petroff et al. (submitted).
<p>Model data for Sequential Dynamics of Stearoyl-CoA Desaturase /Ligand Binding and Unbinding Mechanism: A Computational Study by Petroff et al. (submitted).</p> <p>This folder contains the files needed to start each of the models described in the paper. The files were created using MOE 2020 software made by Chemical Computing Group and run on NAMD2.</p> <p>The models identifiers in the paper correspond to the following terms in the code:</p> <p>Substrate: "13_5_coa"</p> <p>Product: "13_5_coa_desat_fe3"</p> <p>Apoprotein: "13_5_no_ligand"</p> <p>Saturated Lipid: "13_5_nocoa"</p> <p>Desaturated Lipid: "13_5_nocoa_desat_fe3"</p> <p>CoA model: "13_5_coa_nolipid"</p> <p>Substrate-waterbox model: "13_5_coa_waterbox"</p> <p>Saturated Lipid-waterbox: "13_5_nocoa_waterbox"</p>
Agricultural land use and livestock composition by case study of the SURE-Farm project - Input data for a dynamic nitrogen flow model
<p>Dataset used as input to the model by Pinsard et al (2021) and results published in D5.5 of the SURE-Farm project.</p>
Evaluation of dynamically downscaled CMIP6-CCAM models over Australia
<p>Downscaled CCAM-CMIP6 model data used in the evaluation of CCAM-CMIP6 models against AGCD observations:</p><ol><li>Data required for daily evaluation of precipitation and temperature variables, and calculation of Perkins skill score</li><li>Data required for evaluation of bias for precipitation and temperature variables</li><li>Data required for KGE skill score</li></ol>
Data-driven physics-based modeling of pedestrian dynamics - dataset: Pedestrian trajectories at Eindhoven train station
<p>Pedestrian trajectories measured at train station Eindhoven Centraal (the Netherlands) on platform 2 with acces to tracks 3 and 4.</p> <p>The dataset is partitioned in files containing 10 consecutive days each, recording 4 data fields:</p> <ul> <li><strong>time_ms:</strong> Passed time since start of the measurements. Unit: milliseconds.</li> <li><strong>object_identifier:</strong> unique id identifying an object.</li> <li><strong>x_position_mm: </strong>coordinates of the object along the x-axis at the given time. Unit: millimeters.</li> <li><strong>y_position_mm:</strong> coordinates of the object along the y-axis at the given time. Unit: millimeters.</li> </ul> <p>Each object resembles a pedestrian on the train platform recorded with 10 frames per second. We deliberately removed exact date and time information for privacy reasons (see additional note). The data set consists of 60 consecutive days starting at an unkown time between 00:00 AM and 01:00 AM of a random date between April 1st and May 1st 2022. An overhead image of the platform is included showing train track 3 in the bottom and train track 4 in the top of the image.</p> <p>The data set is supplemented to the paper <a title="Data-driven physics-based modeling of pedestrian dynamics" href="https://doi.org/10.48550/arXiv.2407.20794" target="_blank" rel="noopener">Data-driven physics-based modeling of pedestrian dynamics</a> and can be processed by the associated <a title="Software: Data-driven physics-based modeling of pedestrian dynamics" href="https://github.com/c-pouw/physics-based-pedestrian-modeling" target="_blank" rel="noopener">Python implementation</a> to create pedestrian models. </p>
Simulation Data for "Community-Driven Code Comparisons for Three-Dimensional Dynamic Modeling of Sequences of Earthquakes and Aseismic Slip"
<p>Simulation data from Jiang et al. (2022), "Community-Driven Code Comparisons for Three-Dimensional Dynamic Modeling of Sequences of Earthquakes and Aseismic Slip," <em>Journal of Geophysical Research: Solid Earth</em><em>.</em></p> <p>The archive includes simulation data for 3D SEAS benchmarks BP4-QD and BP5-QD that are analyzed in our paper (descriptions in NOTES.txt) </p> <p><strong>BP4-QD Benchmark Simulations:</strong><br>1000 m: jiang.5, lambert.8, barbot.3, barbot.2, dliu.2, li.4<br>500 m: jiang.3, lambert.3, barbot.5, barbot.7, ozawa</p> <p><strong>BP5-QD Benchmark Simulations:</strong><br>2000 m: jiang.6, lambert.8, liu.4, cattania.5, dli.7, barbot.3, dliu.10, li.3<br>1000 m: jiang.2, lambert.7, liu.5, cattania.3, ozawa, dli.5, barbot, dliu.6, li.2<br>500 m: jiang.4, lambert.9, liu.6, cattania.4, ozawa.2, dli.6, barbot.2, dliu.8<br>250 m: lambert.10, liu.7</p> <p><strong>BP5-QD with Off-Fault Data:</strong><br>1000 m: lambert.7, dli.5, barbot, dliu.6, li.2<br>500 m: lambert.9, dli.6, barbot.2, dliu.8</p> <p>Tables 2–4 in our paper summarizes details of numerical codes and selected simulations.</p> <p>The benchmark descriptions and the full suite of simulation data are available at SEAS online platform https://strike.scec.org/cvws/seas/.</p>
Supplementary data - Modelling the role of dynamic topography and eustasy in the evolution of the Great Artesian Basin
<p>This data repository contains the supplementary data for the paper:</p> <p><strong>Modelling the role of dynamic topography and eustasy in the evolution of the Great Artesian Basin.</strong></p> <p>Carmen Braz<sup>1</sup>, Sabin Zahirovic<sup>1</sup>, Tristan Salles<sup>1</sup>, Nicolas Flament<sup>2</sup>, Lauren Harrington<sup>1</sup>, R. Dietmar Müller<sup>1</sup></p> <p><sup>1</sup> EarthByte Group, School of Geosciences, The University of Sydney, Sydney, Australia</p> <p><sup>2</sup> GeoQuEST Research Centre, School of Earth and Environmental Sciences, University of Wollongong, Wollongong, NSW, Australia</p> <p><em>Basin Research, https://doi.org/10.1111/bre.12606</em></p> <p>Included in this supplement are:</p> <ul> <li> All input files required for running Badlands models M1-M4</li> <li> Badlands digital output for preferred model M4</li> <li> Animations of topography and erosion-deposition through time for all four models presented in the paper </li> <li> Sediment layers for all time steps for preferred model M4 provided as netcdf grids.</li> </ul>
GFDL hurricane model track data associated with "Dynamical downscaling projections of late 21st century U.S. landfalling hurricane activity"
<p>These data include North Atlantic tropical cyclone track and intensity for control and projected late 21st century simulation from the GFDL hurricane model used in a <em>Climatic</em> <em>Change</em> manuscript: </p> <p>Knutson, T., J. Sirutis, M. Bender, R. Tuleya, and B. Schenkel, 2022: Dynamical downscaling projections of late 21st century U.S. landfalling hurricane activity. <em>Clim. Change</em>, <strong>171</strong>, 1–23.<br> <br> A readme file included below describes the variables and format of the tropical cyclone track data. Questions about the dataset may be directed to Ben Schenkel (<a href="mailto:benschenkel@gmail.com">benschenkel@gmail.com</a>) and Tom Knutson (<a href="mailto:tom.knutson@noaa.gov">tom.knutson@noaa.gov</a>). </p>
Model codes and simulation data for "Modeling demographic-driven vegetation dynamics and ecosystem biogeochemical cycling in NASA GISS's Earth system model (ModelE-BiomeE v.1.0)"
<p>ModelE-BiomeE v1.0 model codes and data This folder contains the simulation data and model codes that were used in the paper ‘Modeling demographic-driven vegetation dynamics and ecosystem biogeochemical cycling in NASA GISS’s Earth system model (ModelE-BiomeE v.1.0)’ (https://doi.org/10.5194/gmd-2022-72). We included the data simulated by ModelE-BiomeE v.1.0 with settings of full demography (folder FullDemography) and single cohort (folder SingleCohort), and initial settings of land grids and vegetation data (folder GlobalVegetation). The codes include the full ModelE 2.1, module BiomeE files in ModelE, and the standalone BiomeE. In the folder FullDemography, we have 4 netcdf files for global output and 25 files for single grids output. The files ‘FullDM_2588_JAN.nc’ and ‘FullDM_2588_JUL.nc’ are the original model output of January and July in the year 2588. The file ‘FullDM_2588_Annual.nc’ is the yearly summary of model simulations. The file ‘FullDM_Selected.nc’ is an annual summary of 588 years of model simulation only with selected variables. The csv files are for single grids output at the time steps of daily and yearly. The last digit 1~8 represents the sites of 'BNC','MNT','HF','OKR','KZ','SV','WGK','TPJ', respectively (Table 1). Table 1 Site ID and file number ['BNC', 'MNT', 'HF', 'OKR', 'KZ', 'SV', 'WGK', 'TPJ'] ['8991', '8992', '8993', '8994', '8995', '8996', '8997', '8998'] ['8971', '8972', '8973', '8974', '8975', '8976', '8977', '8978'] ['8961', '8962', '8963', '8974', '8965', '8966', '8977', '8968'] Please refer to Table 2 in the paper for the detail of these 8 sites. ‘DailyLAIGPP.csv’ is a summary of all ‘DailyEcosystem’ files with LAI and GPP data. We included the Python scripts that can be used to generate the figures in out paper (Plotting-BiomeE-MsTMIP.py, Plotting-Scatter-Comparison.py, PlottingBiomeEMaps.py, and PlottingGridOutput.py). For the convenience of readers (in reproducing our figures), we included the summary of reanalysis of the data from observations and MsTMIP in folder ‘Sum-Obs-Simu’. Please refer to the original sources listed in our paper for the detail of these data.</p>
Dynamical mean field theory data for single band Hubbard model
<p>Dynamical mean field theory (DMFT) data for the half filled repulsive single band Hubbard model on four lattices: cubic, diamond, hypercubic in <span class="math-tex">\(d=\infty\)</span>, and hyperdiamond in <span class="math-tex">\(d=\infty\)</span>.</p> <p>It is allowed for long range antiferromagnetic ordering, i.e., the self-consistency condition as seen in Eq. 97 of Georges et al., Rev. Mod. Phys. 68, 13 is used.</p> <p>The simulations are done for different temperatures between <span class="math-tex">\(\beta t = 3\)</span> and <span class="math-tex">\(\beta t = 40\)</span>.</p> <p>The interaction <span class="math-tex">\(U\)</span> is chosen in steps of 0.1 centered around the respective Mott transitions.</p> <p>Available data are</p> <ul> <li>interacting Greens function on Matsubara frequencies</li> <li>self energy on Matsubara frequencies</li> <li>double occupation</li> <li>spin up and spin down occupation</li> </ul> <p>Data is generated using triqs 1.4 and the continous time quantum Monte Carlo application 1.4, compare homepage at https://triqs.ipht.cnrs.fr</p> <p>The data are used in the publication "First-order metal-insulator transitions in the extended Hubbard model due to self-consistent screening of the effective interaction" available on the arXiv (arXiv:1706.09644). There it is used to calculate derivatives of the double occupancy w.r.t. the interaction U.</p> <p>The data are available in hdf5 archives and can easily be accessed, e.g., with python and h5py. An example python script is included. Relevant input parameters are included in the h5 files.</p> <p> </p>
Assessment of mutation probabilities of KRAS G12 missense mutants and their long-time scale dynamics by atomistic molecular simulations and Markov state modeling: Datasets.
<p>Datasets related to the publication [1].<br> Including:</p> <ul> <li>KRAS G12X mutations derived from COSMIC v.79 [http://cancer.sanger.ac.uk/cosmic/] (KRAS_G12X_mut_COSMICv79..xlsx)</li> <li>RMSFs (300-2000ns) of GDP-systems (300_2000rmsf_GDP_systems_RAW_AVG_SE.xlsx)</li> <li>RMSFs (300-2000ns) of GTP-systems (300_2000RMSF_GTP_systems_RAW_AVG_SE.xlsx)</li> <li>PyInteraph analysis data for salt-bridges and hydrophobic clusters (.dat files for each system in the PyInteraph_data.zip-file)</li> <li>Backbone trajectories for each system (residues 4-164; frames for every 1ns). Last number (e.g. _1) refers to the replica of the simulated system.</li> <li>backbone_4-164.gro/.pdb/.tpr -files (resid 4-164) </li> </ul> <p><br> [1] Pantsar T et al. Assessment of mutation probabilities of KRAS G12 missense mutants and their long-time scale dynamics by atomistic molecular simulations and Markov state modeling. <em>PLoS Comput Biol Submitted</em> (2018)</p>
Global monthly discharge dataset, derived from dynamical 1-D water-energy routing model (DynWat) at 10 km spatial resolution
<pre>Global 10km spatial resolution discharge dataset at the global scale for all major rivers, lakes and reservoirs. Data are provided at a monthly temporal resolution.</pre>
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.