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datasets available to search
ShareScore release 0.9.0
Dataset results
24 results for “ELF3”
ELF3 prion-like domain Martini clustering simulations
<p>This dataset contains Martini coarse-grain simulations of ELF3-PrD, with each simulation containing 100 PrD monomers. These trajectories were created as part of a publication exploring the temperature-responsive condensation of the ELF3-PrD in the scientific pulication titled, "Molecular dynamics simulations illuminate the role of sequence context in the ELF3-PrD-based temperature sensing mechanism in plants." Included are trajectories for ELF3-PrD variants including wildtype (7 glutamine-long polyQ tract), 0Q (variable poly-glutamine tract removed), 19Q (polyQ tract extenden to 19 glutamine residues) and the F527A mutant. Each variant includes trajectories at 290K, 300K, 320K and 405K. There are three replicates for each condition, except for wildtype 300K and 19Q 340K, of which two replicates are provided.</p>
Data associated with the manuscript "Complex epistatic interactions between ELF3, PRR9, and PRR7 regulates the circadian clock and plant physiology"
<p>Datasets associated with the figures in the paper entilted: "<strong>Complex epistatic interactions between ELF3, PRR9, and PRR7 regulates the circadian clock and plant physiology"</strong></p>
ELF3 prion-like domain REST2 simulation trajectories
<p>This dataset contains ELF3 prion-like domain (PrD) trajectories obtained with replica exchange with solute tempering (REST2). These trajectories were created as part of a publication exploring the temperature-responsive condensation of the ELF3-PrD in the scientific pulication titled, "Molecular dynamics simulations illuminate the role of sequence context in the ELF3-PrD-based temperature sensing mechanism in plants." Included are trajectories for ELF3-PrD variants including wildtype, 0Q (variable poly-glutamine tract removed), and an F527A mutant, each at a range of temperatures between 290K and 405K.</p>
Knockdown of lncRNA ELF3-AS1 in two gastric cancer cell lines
GEO Series GSE161291. Homo sapiens. 8 samples. Type: Expression profiling by high throughput sequencing.
The role of ELF3 in GIS-NEC and SCLC
GEO Series GSE190618. Homo sapiens. 31 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
Identification of differentially expressed miRNAs after knockdown of ELF3-AS1 in gastric cancer
GEO Series GSE161553. Homo sapiens. 3 samples. Type: Non-coding RNA profiling by high throughput sequencing.
RNA-Seq profiling of ELF3 and PRR37 in Brachypodium Distachyon
GEO Series GSE147373. Brachypodium distachyon. 149 samples. Type: Expression profiling by high throughput sequencing.
Transcriptional Profiling of NASH mice with hepatocyte-specific knock down of Elf3 or Glis2
GEO Series GSE162869. Mus musculus. 41 samples. Type: Expression profiling by high throughput sequencing.
Effect of ELF3 and NLRP7 depletion on gene expression in JEG-3 cells
GEO Series GSE241792. Homo sapiens. 12 samples. Type: Expression profiling by high throughput sequencing.
Epithelial Transcription Factor Elf3 mediates host immune responses to microbiota and protects against aerocystitis in zebrafish
GEO Series GSE293676. Danio rerio. 16 samples. Type: Expression profiling by high throughput sequencing.
ELF3 activated by a super-enhancer and an autoregulatory feedback loop is required for high level HLA-C expression on extravillous trophoblasts
GEO Series GSE165511. Homo sapiens. 5 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Expression profiling of isogenic A549 cell lines with and without ELF3 knock-down
GEO Series GSE137479. Homo sapiens. 6 samples. Type: Expression profiling by array.
A complementary role for ELF3 and TFL1 in the regulation of flowering time by ambient temperature.
GEO Series GSE15689. Arabidopsis thaliana. 18 samples. Type: Expression profiling by array.
Transcriptional gene expression regulation in medullary thymic epithelial cells by the transcription factors Ehf, Fezf2, Elf3 and Klf4
GEO Series GSE232702. Mus musculus. 8 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Epithelial Tumour Suppressor ELF3 is a Lineage-Specific Amplified Oncogene in Lung Adenocarcinoma
GEO Series GSE137481. Homo sapiens. 326 samples. Type: Expression profiling by array; Methylation profiling by array; Genome variation profiling by SNP array.
ChIP-Seq profiling of ELF3,PRR37 and PHYC in response to photoperiod change at different ZTime in Brachypodium distachyon
GEO Series GSE128206. Brachypodium distachyon. 11 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Drought inhibits thermomorphogenesis via salicylic acid-mediated suppression of ELF3 phase separation
GEO Series GSE287933. Arabidopsis thaliana. 12 samples. Type: Expression profiling by high throughput sequencing.
Increased CD44 expression in low-dose chemotherapeutic treated colon cancer cells is controlled by ELF3
GEO Series GSE193865. Homo sapiens. 6 samples. Type: Expression profiling by high throughput sequencing.
Genome wide screening for binding target of ELF3 transcription factor in biliary epithrial cell line HBDEC2
GEO Series GSE156165. Homo sapiens. 2 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Expression profiling analysis of ELF3-knockdown (KD) and control human bile duct cells
GEO Series GSE148106. Homo sapiens. 6 samples. Type: Expression profiling by array.
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
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DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.