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73 results for “ESBL”
Supplementary Data - Impacts of selective digestive decontamination on the pangenome composition of ESBL-E. coli
<p>Supplementary Data of:</p> <p><span>Impacts of selective digestive decontamination on the pangenome composition of ESBL<em>-E. coli</em></span></p>
WorldCOM Deliverable 1: Prevalence of ESBL subtypes in bacterial pathogens and a sequence database of selected alleles
<p><strong>OHEJP Project: WorldCOM, Deliverable 1, Work Package 1.</strong></p> <p>This dataset is connected to Work Package 1, Task1 of the WorldCOM consortium grant within the One Health EJP group. The aim was to analyse publicly available sequences for antimicrobial resistance genes associated with <em>Salmonella</em>, <em>Campylobacter</em> and <em>E. coli</em>. For the initial phase of this work package, we have focused on ESBL-related AMR genes. As these genes are absent from <em>Campylobacter</em>, we have not included this bacterium in these analyses, and have used the important pathogens <em>Klebsiella</em> and <em>Acinetobacter</em>. All types and subtypes of Extended Spectrum β-Lactamases (ESBLs) and plasmid-mediated colistin resistance genes have been analysed for frequency among reported and extracted sequences. High frequency resistant genes subtypes have been highlighted for further sequence analysis to illustrate geographic distribution and geographic-specific single nucleotide polymorphisms (SNPs). The data shown are work in progress. </p>
Antimicrobial resistance - Salmonella, E. Coli, prevalence ESBL data
<p>The database contains the evidence presented by the Data Visualization tool (available on EFSA website) accompanying the publication of the 2015 European Union Summary Report on antimicrobial resistance (AMR). Data correspond to occurrence of resistance in Salmonella from animals and humans, occurrence of resistance in E. Coli in animals and prevalence of ESBL-producing E.coli in animals and meat, in EU Member States.</p> <p>Format XLSX; Contact zoonoses_support@efsa.europa.eu (EFSA); FWD@ecdc.europa.eu (ECDC)</p> <p> </p>
Antimicrobial resistance - Salmonella, E. Coli, prevalence ESBL data
<p>The database contains the evidence presented by the Data Visualization tool (available on EFSA website) accompanying the publication of the 2015 European Union Summary Report on antimicrobial resistance (AMR). Data correspond to occurrence of resistance in Salmonella from animals and humans, occurrence of resistance in E.Coli in animals and prevalence of ESBL-producing E.coli in animals and meat, in EU Member States.</p> <p> </p> <p><strong>Format XLSX; Contact zoonoses_support@efsa.europa.eu (EFSA); FWD@ecdc.europa.eu (ECDC)</strong></p>
Code and Additional Files for the Manuscript "The Impact of Farming Practices on Resistance to Critically Important Antimicrobials in ESBL or AmpC-producing Escherichia coli in Thailand"
<p>These scripts were used in the"The Impact of Farming Practices on Resistance to Critically Important Antimicrobials in ESBL or AmpC-producing Escherichia coli in Thailand" manuscript. The scripts are ordered for ease of use. It also contains intermediate files and files necessary for the mapping. Table S1 containing the metadata is available in the supplementary information of the manuscript.</p>
Specific monitoring results of ESBL-/AmpC-/carbapenemase-producing bacteria and specific monitoring of carbapenemase-producing bacteria, in the absence of isolates detected complementing the European Union Overview Summary Report on Antimicrobial Resistance in zoonotic and indicator bacteria from humans, animals and food in 2017/2018
<p>This dataset derives from the specific monitoring of E. coli producers of ESBLs/AmpC/carbapenemases, as well as the specific monitoring of carbapenemase-producers (voluntary reporting), in the absence of any isolates detected. This dataset contains only data when Total units positive equals zero '0'.</p>
Clonal relationship of ESBL-producing Salmonella strains from humans and poultry in North-Eastern Algeria
<p>BVET-D-16-00240</p> <p>A study was conducted to determine antibiotic resistance levels and patterns, and to assess the relationship of avian drug-resistant Salmonella to human clinical isolates in Algéria.</p>
2021aggregated dataset submitted on the negative results for extended-spectrum b-lactamase(ESBL) and the carbapenemase-producers - complementing the European Union Summary Report on Antimicrobial Resistance in zoonotic and indicator bacteria from humans, animals and food 2020/2021
<p>Data provided by the Member States on the 2021 on the negative results for extended-spectrum b-lactamase(ESBL) and the carbapenemase-producers - complementing the European Union Summary Report on Antimicrobial Resistance in zoonotic and indicator bacteria from humans, animals and food 2020/2021.</p>
Impact of Specific Antimicrobials and MIC Values on the Outcome of Bloodstream Infections Due to ESBL- or Carbapenemase-producing Enterobacterales in Solid Organ Transplantation: an Observational Mult
ClinicalTrials.gov study NCT02852902. IPD Sharing: YES. Countries: 1. Publications: 3.
Genomic analysis reveals close genetic similarity between ESBL-producing E. coli isolates from humans and dogs, suggesting potential for inter-species transmission
Open the record for dataset details and reuse information.
Plasmid- and strain-specific factors drive variation in ESBL-plasmid spread in vitro and in vivo
<p>Horizontal gene transfer, mediated by conjugative plasmids, is a major driver of the global rise of antibiotic resistance. However, the relative contributions of factors that underlie the spread of plasmids and their roles in conjugation in vivo are unclear. To address this, we investigated the spread of clinical Extended Spectrum Beta-Lactamase (ESBL)-producing plasmids in the absence of antibiotics in vitro and in the mouse intestine. We hypothesised that plasmid properties would be the primary determinants of plasmid spread and that bacterial strain identity would also contribute. We found clinical Escherichia coli strains natively associated with ESBL-plasmids conjugated to three distinct E. coli strains and one Salmonella enterica serovar Typhimurium strain. Final transconjugant frequencies varied across plasmid, donor, and recipient combinations, with qualitative consistency when comparing transfer in vitro and in vivo in mice. In both environments, transconjugant frequencies for these natural strains and plasmids covaried with the presence/absence of transfer genes on ESBL-plasmids and were affected by plasmid incompatibility. By moving ESBL-plasmids out of their native hosts, we showed that donor and recipient strains also modulated transconjugant frequencies. This suggests that plasmid spread in the complex gut environment of animals and humans can be predicted based on in vitro testing and genetic data.</p>
Data from "The Impact of Chlorine Disinfection of Hospital Wastewater on Clonal Similarity and ESBL-Production in Selected Bacteria of the Family Enterobacteriaceae"
<p>Data to accompany paper "Rolbiecki, D.; Korzeniewska, E.; Czatzkowska, M.; Harnisz, M. The Impact of Chlorine Disinfection of Hospital Wastewater on Clonal Similarity and ESBL-Production in Selected Bacteria of the Family Enterobacteriaceae. <em>Int. J. Environ. Res. Public Health</em> 2022, <em>19</em>, 13868. https://doi.org/10.3390/ijerph192113868"</p> <p>1. Bacterial Strains Data.xlsx - characteristics of the strains obtained in this study (Strain number, medium used for isolation, research season, research site, isolation date.</p> <p>2. Data of Phenotypic Detection of ESBL Producers.xlsx - ESBL+ bacterial detection analysis results: two-stage detection using chromID™ ESBL medium and Combined Disc Test (CD); inhibition zones for antibiotic discs; ESBL analysis result.</p> <p>3. ERIC PCR Locus Molecular Weight.xlsx - frequency of occurrence of fragments with specific molecular weights during ERIC-PCR analysis.</p> <p>4. ESBL Positive Strains Characterisation.xlsx - individual results of molecular analyzes of DNA isolated from strains (results of PCR tests, identification by sequencing).</p> <p>5. SimilarityMatrixCorrelation.xlsx - matrix of similarities by calculating Pearson’s correlation coefficient. Pearson’s correlation coefficient was calculated based on the intensity of ethidium bromide fluorescence along normalized migration distances for the two fingerprints. </p> <p>6. similarityMatrixDice.xlsx - matrix of similarities by calculating the Dice coefficient. The Dice coefficient approach, similarities are assessed based on the presence or absence (0/1 values) of bands of the same molecular weight in fingerprint patterns</p>
Enterobacteriaceae Producing Extended-spectrum β-lactamases (ESBL) Decolonization Study
ClinicalTrials.gov study NCT00826670. IPD Sharing: Not stated. Countries: 1. Publications: 1.
CSE-1034 (Ceftriaxone+ Sulbactam+ EDTA) Compared to Meropenem in Complicated Urinary Tract Infections (cUTIs) Caused by ESBL Producing Gram Negative Bacteria
ClinicalTrials.gov study NCT03477422. IPD Sharing: NO. Countries: 1. Publications: 1.
Efficacy of Temocillin in Urinary Tract Infection Due to ESBL Producing and AmpC Hyperproducing Enterobacteriaceae
ClinicalTrials.gov study NCT02681263. IPD Sharing: Not stated. Countries: 1. Publications: 5.
Transmission of ESBL-producing Enterobacteriaceae
ClinicalTrials.gov study NCT03465683. IPD Sharing: Not stated. Countries: 1. Publications: 1.
Community-Onset Bacteremia Due to ESBL Producing E.Coli or K.Pneumoniae in China: Prevalence, Risk Factors and Prognosis
ClinicalTrials.gov study NCT01961206. IPD Sharing: Not stated. Countries: 1. Publications: 3.
Can Probiotic Vivomixx Eradicate Colonization With ESBL?
ClinicalTrials.gov study NCT03860415. IPD Sharing: UNDECIDED. Countries: 1. Publications: 1.
ESBL in Patients Returning to Sweden With Traveller's Diarrhoea
ClinicalTrials.gov study NCT03866291. IPD Sharing: UNDECIDED. Countries: 1. Publications: 1.
Infections Caused by ESbL-Producing Enterobacteriaceae in Italy
ClinicalTrials.gov study NCT00404625. IPD Sharing: Not stated. Countries: 1. Publications: 1.
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International Brain Laboratory public data
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OpenNeuro
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