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datasets available to search
ShareScore release 0.9.0
Dataset results
210 results for “Ebola”
Implementation of Genomic Variant Calling Using GATK4, SPARK, WDL, CROMWELL and DOCKER Over Simulated Ebola NGS Dataset.
<p>Ebola genome is manually mutated to contain non-structural as well as structural variants. One ebola genome contains non-structural variants - 10 SNPs, 10 INDELs, 05 TRANSLOCATIONs, 05 INSERSIONs and their reverse complements. Similarly, other two set of mutated genomes contain structural variants. Each set contains seven mutated ebola genome each one for large deletion, insertion, duplication, translocation, inversion, complex variant1 (consecutive three mutations - insertion, duplication and deletion) and complex variants2 (consecutive three mutations - deletion, duplication and deletion). All insertions are novel sequence insertion.</p> <p> </p>
A Wikipedia dataset of Ebola disease related articles
<p>A subset of articles extracted from the French Wikipedia (on 28/04/2019). Data published here include articles related to Ebola and some tropical related diseases. Each article is a UTF8 plain text.</p>
Implementation of Genomic Variant Calling Using GATK4, SPARK, WDL, CROMWELL and DOCKER Over Simulated Ebola NGS Dataset.
<p>Ebola genome is manually mutated to contain non-structural variants - 10 SNPs, 10 INDELs, 05 TRANSLOCATIONs, 05 INSERSIONs and their reverse complements. Paired-end illumina RNASEQ reads are simulated in fastq format. </p>
Implementation of Genomic Variant Calling Using GATK4, SPARK, WDL, CROMWELL and DOCKER Over Simulated Ebola NGS Dataset.
<p>Ebola genome is manually mutated to contain structural variants. There are seven mutated ebola genomes each one for two large deletions, insertions, duplications, translocations, inversions, one complex variant1 (consecutive three mutations - insertion, duplication and deletion) and one complex variants2 (consecutive three mutations - deletion, duplication and deletion). All insertions are novel sequence insertion. Paired-end illumine RNASEQ reads are simulated in fastq format.</p>
Implementation of Genomic Variant Calling Using GATK4, SPARK, WDL, CROMWELL and DOCKER Over Simulated Ebola NGS Dataset.
<p>Ebola genome is manually mutated to contain structural variants. There are seven mutated ebola genomes each one for large deletion, insertion, duplication, translocation, inversion, complex variant1 (consecutive three mutations - insertion, duplication and deletion) and complex variants2 (consecutive three mutations - deletion, duplication and deletion). All insertions are novel sequence insertion. Paired-end illumine RNASEQ reads are simulated in fastq format.</p>
ebola: Dataset v1.2
<p>This data comprises a total of 213 cases evaluated for Ebola virus infection at the Kenema Government Hospital in Sierra Leone between May 25 and June 18, 2014. Details in “Clinical Illness and Outcomes in Patients with Ebola in Sierra Leone”, by John S. Schieffelin, et al.</p> <p>Available are raw files (Excel, VCF formats), Mirador project, and single CSV file.</p> <p>Zenodo record (DOI): https://zenodo.org/record/13163</p>
Spatiotemporal-evolution-of-Ebola: First release
<p>Data and code for "Spatiotemporal evolution of Ebola virus disease at sub-national level during the 2014 West Africa epidemic: model scrutiny and data meagreness"</p>
2014, Nigeria Ebola epidemic data and knowledge
Information about the 2014, Nigeria Ebola epidemic curated from multiple publications and reports. The information is represented in machine-interpretable Apollo-XSD format. The terminology is defined by the Apollo-SV ontology and standard identifiers.
2014, Mali Ebola epidemic data and knowledge
Information about the 2014, Mali Ebola epidemic curated from multiple publications and reports. The information is represented in machine-interpretable Apollo-XSD format. The terminology is defined by the Apollo-SV ontology and standard identifiers.
2014, Democratic Republic of the Congo Ebola epidemic data and knowledge
Information about the 2014, Democratic Republic of the Congo Ebola epidemic curated from multiple publications and reports. The information is represented in machine-interpretable Apollo-XSD format. The terminology is defined by the Apollo-SV ontology and standard identifiers.
2014, Dallas, Texas, United States of America Ebola epidemic data and knowledge
Information about the 2014, Dallas, Texas, United States of America Ebola epidemic curated from multiple publications and reports. The information is represented in machine-interpretable Apollo-XSD format. The terminology is defined by the Apollo-SV ontology and standard identifiers.
2007, Bundibugyo, Uganda Ebola epidemic data and knowledge
Information about the 2007, Bundibugyo, Uganda Ebola epidemic curated from multiple publications and reports. The information is represented in machine-interpretable Apollo-XSD format. The terminology is defined by the Apollo-SV ontology and standard identifiers.
2012, Orientale, Democratic Republic of the Congo Ebola epidemic data and knowledge
Information about the 2012, Orientale, Democratic Republic of the Congo Ebola epidemic curated from multiple publications and reports. The information is represented in machine-interpretable Apollo-XSD format. The terminology is defined by the Apollo-SV ontology and standard identifiers.
2014 - 2017, Sierra Leone Ebola epidemic data and knowledge
Information about the 2014 - 2017, Sierra Leone Ebola epidemic curated from multiple publications and reports. The information is represented in machine-interpretable Apollo-XSD format. The terminology is defined by the Apollo-SV ontology and standard identifiers.
2012, Uganda Ebola epidemic data and knowledge
Information about the 2012, Uganda Ebola epidemic curated from multiple publications and reports. The information is represented in machine-interpretable Apollo-XSD format. The terminology is defined by the Apollo-SV ontology and standard identifiers.
1995, Kwilu, Bandundu, Zaire Ebola epidemic data and knowledge
Information about the 1995, Kwilu, Bandundu, Zaire Ebola epidemic curated from multiple publications and reports. The information is represented in machine-interpretable Apollo-XSD format. The terminology is defined by the Apollo-SV ontology and standard identifiers.
1979, Yambio, West Equatoria, Sudan Ebola epidemic data and knowledge
Information about the 1979, Yambio, West Equatoria, Sudan Ebola epidemic curated from multiple publications and reports. The information is represented in machine-interpretable Apollo-XSD format. The terminology is defined by the Apollo-SV ontology and standard identifiers.
1996 - 1997, Gabon Ebola epidemic data and knowledge
Information about the 1996 - 1997, Gabon Ebola epidemic curated from multiple publications and reports. The information is represented in machine-interpretable Apollo-XSD format. The terminology is defined by the Apollo-SV ontology and standard identifiers.
1976, Sudan Ebola epidemic data and knowledge
Information about the 1976, Sudan Ebola epidemic curated from multiple publications and reports. The information is represented in machine-interpretable Apollo-XSD format. The terminology is defined by the Apollo-SV ontology and standard identifiers.
2002 - 2003, Cuvette-Ouest, Congo Ebola epidemic data and knowledge
Information about the 2002 - 2003, Cuvette-Ouest, Congo Ebola epidemic curated from multiple publications and reports. The information is represented in machine-interpretable Apollo-XSD format. The terminology is defined by the Apollo-SV ontology and standard identifiers.
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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.