Find research datasets worth reusing
Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.
135
datasets available to search
ShareScore release 0.9.0
Dataset results
135 results for “Entolomataceae”
Figure 2 in THE ENTOLOMATACEAE OF THE PAKARAIMA MOUNTAINS OF GUYANA VII: ENTOLOMA DICYMBOPHILUM SP. NOV. AND A KEY TO GUYANESE SPECIES OF ENTOLOMA S. STR.
Figure 2. Microscopic features of Entoloma dicymbophilum Largent & T.W.Henkel, sp. nov. A, basidiospores; B, basidia and basidioles; C, pileipellis and subtending trama; D, pileus trama. All photographs of the holotype, Henkel 9740, taken by D. L. Largent. Scale bars: A and B, 10 μm; C and D, 50 μm.
Figure 1. Entoloma dicymbophilum Largent & T.W in THE ENTOLOMATACEAE OF THE PAKARAIMA MOUNTAINS OF GUYANA VII: ENTOLOMA DICYMBOPHILUM SP. NOV. AND A KEY TO GUYANESE SPECIES OF ENTOLOMA S. STR.
Figure 1. Entoloma dicymbophilum Largent & T.W.Henkel, sp. nov. A, Field habit, off-white to cream basidiomata with exposed lamellae, Upper Potaro Basin, Guyana; B, immature basidioma (lateral view). Each scale bar, 20 mm. Photographs of the holotype, Henkel 9740, taken by Todd Elliott (A) and Terry Henkel (B).
FIG. 4 in Molecular phylogeny and morphology reveal a new species of genus Rhodocybe sensu stricto Maire (Entolomataceae; Agaricales) from Pakistan
FIG. 4. — Microscopic characters of Rhodocybe pakistanica sp. nov. (LAH37947): A, basidiospores; B, basidia; C, D, cheilo- pleurocystidia; E, gloeoplerous hyphae in hymenial and pileal trama; F, stipitipellis. Scale bars: A, 8 μm; B, C, 10 μm; D, 16 μm; E, 20 μm; F, 25 μm.
FIG. 3 in Molecular phylogeny and morphology reveal a new species of genus Rhodocybe sensu stricto Maire (Entolomataceae; Agaricales) from Pakistan
FIG. 3. — Basidiomata of Rhodocybe pakistanica sp. nov.: A-C, LAH37948; D-F, LAH37947. Scale bars: 15 mm.
FIG. 2 in Molecular phylogeny and morphology reveal a new species of genus Rhodocybe sensu stricto Maire (Entolomataceae; Agaricales) from Pakistan
FIG. 2. — Maximum likelihood phylogenetic tree of sequences of Entolomataceae Kotl. & Pouzar, resulting from the analysis of combined nrITS-28S sequences; maximum likelihood bootstrap BT support values greater than 50% are written above the nodes; new species Rhodocybe pakistanica sp. nov. is indicated in bold font.
FIG. 5 in Molecular phylogeny and morphology reveal a new species of genus Rhodocybe sensu stricto Maire (Entolomataceae; Agaricales) from Pakistan
FIG. 5. — Line drawings of Rhodocybe pakistanica sp. nov. (LAH37947): A, basidiospores; B, basidia; C, cheilo- pleurocystidia;D, gloeoplerous hyphae in hymenial and pileal trama; E, pileipellis; F, stipitipellis. Scale bars: A, 6 μm; B, C, 10 μm; D, 20 μm; E, 12 μm; F, 25 μm.
FIG. 1 in Molecular phylogeny and morphology reveal a new species of genus Rhodocybe sensu stricto Maire (Entolomataceae; Agaricales) from Pakistan
FIG. 1. — Maximum likelihood phylogenetic tree of sequences of Entolomataceae Kotl. & Pouzar, resulting from the analysis of nrITS sequences; maximum likelihood bootstrap BT support values greater than 50% are written above the nodes; new species Rhodocybe pakistanica sp. nov. is indicated in bold font.
TABLE 1 in Molecular phylogeny and morphology reveal a new species of genus Rhodocybe sensu stricto Maire (Entolomataceae; Agaricales) from Pakistan
<p>TABLE 1. — Voucher/strain/isolate, country, GenBank/UNITE accession number, and reference for the specimens included in nrITS and combined ITS-28S phylogenetic analysis. The sequences produced during this study are shown in <b>bold font</b>.</p><table><tbody><tr><th></th><th><b>GenBank/UNITE</b></th><th></th><th></th></tr></tbody><tbody><tr><th></th><td><b>accession no.</b></td><td></td><td></td></tr><tr><th><b>Taxon name Voucher/strain/isolate</b></th><td><b>nrITS</b></td><td><b>28S</b></td><td><b>Country</b></td><td><b>Reference</b></td></tr><tr><th><i>Calocybe carnea</i> (outgroup) CBS552.50</th><td>AF357028</td><td>AF223178</td><td>–</td><td>Hofstetter <i>et al.</i> 2002</td></tr><tr><th><i>Clitocella fallax</i> CBS605.79</th><td>AF357018</td><td>AF223165</td><td>–</td><td>Hofstetter <i>et al.</i> 2002</td></tr><tr><th><i>Clitocella fallax</i> CBS129.63</th><td>AF357017</td><td>AF223166</td><td>–</td><td>Hofstetter <i>et al.</i> 2002</td></tr><tr><th><i>Clitocella mundula</i> TJB7599</th><td>DQ494694</td><td>AY700182</td><td>–</td><td>Matheny <i>et al.</i> 2006</td></tr><tr><th><i>Clitocella mundula</i> HMJAU 7275</th><td>MN061331</td><td>MN065723</td><td>China</td><td>Jian <i>et al.</i> 2020</td></tr><tr><th><i>Clitocella orientalis</i> KUN-HKAS 75664 (Liu53)</th><td>MN061332</td><td>MN065726</td><td>China</td><td>Jian <i>et al.</i> 2020</td></tr><tr><th><i>Clitocella orientalis</i> KUN-HKAS 75548 (Cai794)</th><td>MN061333</td><td>MN065727</td><td>China</td><td>Jian <i>et al.</i> 2020</td></tr><tr><th><i>Clitopilopsis albida</i> KUN-HKAS 104519 (JSP224)</th><td>MN061335</td><td>MN065730</td><td>China</td><td>Jian <i>et al.</i> 2020</td></tr><tr><th><i>Clitopilopsis albida</i> KUN-HKAS 104520 (JSP225)</th><td>MN061336</td><td>MN065731</td><td>China</td><td>Jian <i>et al.</i> 2020</td></tr><tr><th><i>Clitopilopsis hirneola</i> MEN 199956</th><td>KC710132</td><td>GQ289211</td><td>–</td><td>Morgado <i>et al.</i> 2013</td></tr><tr><th><i>Clitopilopsis hirneola</i> CBS 126.46</th><td>MH856141</td><td>AF223163</td><td>France</td><td>Vu <i>et al.</i> 2019</td></tr><tr><th><i>Clitopilus passeckerianus</i> CBS 299.35</th><td>MH855682</td><td>MH867198</td><td>Austria</td><td>Vu <i>et al.</i> 2019</td></tr><tr><th><i>Clitopilus scyphoides</i> KRAM5</th><td>MN744420</td><td>MN744422</td><td>India</td><td>-</td></tr><tr><th><i>Clitopilus scyphoides</i> CBS 127.47</th><td>MH856181</td><td>MH867707</td><td>France</td><td>Vu <i>et al.</i> 2019</td></tr><tr><th><i>Clitopilus sinoapalus</i> KUN-HKAS 77037 (Wu865)</th><td>MN061321</td><td>MN065713</td><td>China</td><td>Jian <i>et al.</i> 2020</td></tr><tr><th><i>Clitopilus sinoapalus</i> KUN-HKAS 101191</th><td>MN061322</td><td>MN065711</td><td>China</td><td>Jian <i>et al.</i> 2020</td></tr><tr><th>(Yang6002)</th><td></td><td></td><td></td><td></td></tr><tr><th><i>Clitopilus umbilicatus</i> KUN-HKAS 80310 (Han79)</th><td>MN061324</td><td>MN065716</td><td>China</td><td>Jian <i>et al.</i> 2020</td></tr><tr><th><i>Clitopilus umbilicatus</i> KUN-HKAS 104509</th><td>MN061327</td><td>MN065719</td><td>China</td><td>Jian <i>et al.</i> 2020</td></tr><tr><th>(Wu2506)</th><td></td><td></td><td></td><td></td></tr><tr><th><i>Entoloma caccabus</i> MEN 200324</th><td>KC710063</td><td>GQ289155</td><td>–</td><td>Morgado <i>et al.</i> 2013</td></tr><tr><th><i>Entoloma conferendum</i> MEN 200330</th><td>KC710055</td><td>KC710133</td><td>Slovakia</td><td>Morgado <i>et al.</i> 2013</td></tr><tr><th><i>Entoloma serrulatum</i> LE254361</th><td>KC898447</td><td>KC898501</td><td>Russia</td><td>Morozova <i>et al.</i> 2014</td></tr><tr><th><i>Entoloma</i> sp. Sulzbacher 433/1-D-1</th><td>LT594987</td><td>–</td><td>Brazil</td><td>-</td></tr><tr><th><i>Entoloma tjallingiorum</i> LE254318</th><td>KC898411</td><td>KC898510</td><td>Russia</td><td>Morozova <i>et al.</i> 2014</td></tr><tr><th><i>Lyophyllum decastes</i> (outgroup) JM87/16(T1)</th><td>AF357059</td><td>AF042583</td><td>–</td><td>Hofstetter <i>et al.</i> 2002</td></tr><tr><th><i>Rhodocybe asanii</i> KATO:Fungi:3657</th><td>KX834265</td><td>–</td><td>Türkiye</td><td>Sesli & Vizzini 2017</td></tr><tr><th><i>Rhodocybe asanii</i> KATO:Fungi:3659</th><td>NR_154442</td><td>NG060176</td><td>Türkiye</td><td>Sesli & Vizzini 2017</td></tr><tr><th><i>Rhodocybe asyae</i> KATO:Fungi:3653</th><td>KX834268</td><td>–</td><td>Türkiye</td><td>Sesli & Vizzini 2017</td></tr><tr><th><i>Rhodocybe asyae</i> KATO:Fungi:3640</th><td>NR_154443</td><td>NG060177</td><td>Türkiye</td><td>Sesli & Vizzini 2017</td></tr><tr><th><i>Rhodocybe brunneoaurantiaca</i> CUH AM720</th><td>MW023201</td><td>MW023223</td><td>India: West Bengal</td><td>Dutta <i>et al.</i> 2021</td></tr><tr><th><i>Rhodocybe brunneoaurantiaca</i> CAL 1825</th><td>MW031906</td><td>MW031916</td><td>India: West Bengal</td><td>Dutta <i>et al.</i> 2021</td></tr><tr><th><i>Rhodocybe caelata</i> JVG 1070904-2</th><td>KU862855</td><td>–</td><td>Spain</td><td>Vizzini <i>et al.</i> 2016</td></tr><tr><th><i>Rhodocybe formosa</i> Herb. B. Picillo 12/208</th><td>KU862858</td><td>–</td><td>Italy</td><td>Vizzini <i>et al.</i> 2016</td></tr><tr><th><i>Rhodocybe formosa</i> LIP JVG 1061015</th><td>KU862856</td><td>–</td><td>Spain</td><td>Vizzini <i>et al.</i> 2016</td></tr><tr><th><i>Rhodocybe fumanellii</i> MCVE:29550</th><td>NR_166243</td><td>NG068264</td><td>Italy</td><td>Vizzini <i>et al.</i> 2018</td></tr><tr><th><i>Rhodocybe fusipes</i> DLK 587</th><td>MN306210</td><td>–</td><td>Brazil</td><td>Silva-Filho <i>et al.</i> 2020</td></tr><tr><th><i>Rhodocybe fusipes</i> DLK 298</th><td>MN306209</td><td>–</td><td>Brazil</td><td>Silva-Filho <i>et al.</i> 2020</td></tr><tr><th><i>Rhodocybe incarnata</i> REH5369</th><td>MT254071</td><td>–</td><td>Venezuela</td><td>Silva-Filho <i>et al.</i> 2020</td></tr><tr><th><i>Rhodocybe luteobrunnea</i> CAL:1322</th><td>NR_154434</td><td>NG060167</td><td>India</td><td>–</td></tr><tr><th><i>Rhodocybe matesina</i> MCVE:29261</th><td>KY629962</td><td>KY629964</td><td>Italy</td><td>–</td></tr><tr><th><i>Rhodocybe matesina</i> MCVE:29262</th><td>NR_154455</td><td>NG060184</td><td>Italy</td><td>–</td></tr><tr><th><i>Rhodocybe mellea</i> JBSD127402</th><td>MN784993</td><td>–</td><td>Dominican Republic</td><td>Baroni <i>et al.</i> 2020</td></tr><tr><th><i>Rhodocybe mellea</i> CORT013885</th><td>MN784992</td><td>–</td><td>Dominican Republic</td><td>Baroni <i>et al.</i> 2020</td></tr><tr><th><i>Rhodocybe mellea</i> NYBG815044</th><td>MN784995</td><td>–</td><td>Costa Rica</td><td>Baroni <i>et al.</i> 2020</td></tr><tr><th><i>Rhodocybe mellea</i> CORT014470</th><td>MN784994</td><td>–</td><td>Belize</td><td>Baroni <i>et al.</i> 2020</td></tr><tr><th><i>Rhodocybe mellea</i> var. <i>depressa</i> F. Wartchow 08-2019</th><td>MT408926</td><td>OL687341</td><td>Brazil</td><td>Xavier <i>et al.</i> 2022</td></tr><tr><th><i>Rhodocybe minutispora</i> LIP JVG 1071101</th><td>KU862860</td><td>–</td><td>Spain</td><td>Vizzini <i>et al.</i> 2016</td></tr><tr><th><b><i>Rhodocybe pakistanica</i> sp. nov. LAH37948</b></th><td><b>OR606544</b></td><td><b>OR606542</b></td><td><b>Pakistan</b></td><td><b>This study</b></td></tr><tr><th><b><i>Rhodocybe pakistanica</i> sp. nov. LAH37949</b></th><td><b>OR606545</b></td><td><b>–</b></td><td><b>Pakistan</b></td><td><b>This study</b></td></tr><tr><th><b><i>Rhodocybe pakistanica</i> sp. nov. LAH37947</b></th><td><b>OR606543</b></td><td><b>OR606541</b></td><td><b>Pakistan</b></td><td><b>This study</b></td></tr><tr><th><b>(holotype)</b></th></tr><tr><th><i>Rhodocybe pallidogrisea</i> CORT 013944</th><td>KX271752</td><td>–</td><td>Australia</td><td>–</td></tr><tr><th><i>Rhodocybe roseiavellanea</i> PBM4056 (TENN)</th><td>MF686525</td><td>–</td><td>United States</td><td>–</td></tr><tr><th><i>Rhodocybe rubrobrunnea</i> CAL 1387</th><td>KX951452</td><td>–</td><td>India</td><td>–</td></tr><tr><th><i>Rhodocybe</i> sp. Sulzbacher 340</th><td>LT594979</td><td>–</td><td>Brazil</td><td>Sulzbacher <i>et al.</i> 2017</td></tr><tr><th>(UFRN-fungos 2557)</th><td></td><td></td><td></td><td></td></tr><tr><th><i>Rhodocybe</i> sp. Sulzbacher 413</th><td>LT594984</td><td>–</td><td>Brazil</td><td>Sulzbacher <i>et al.</i> 2017</td></tr><tr><th>(UFRN-fungos 2062)</th><td></td><td></td><td></td><td></td></tr><tr><th><i>Rhodocybe truncata</i> CBS482/50</th><td>EF421110</td><td>AF223167</td><td>–</td><td>–</td></tr><tr><th><i>Rhodocybe tugrulii</i> IMG-7316</th><td>MG050105</td><td>MG050111</td><td>United States</td><td>–</td></tr><tr><th><i>Rhodocybe tugrulii</i> KATO:Fungi:3340</th><td>NR_154436</td><td>NG060175</td><td>Türkiye</td><td>–</td></tr><tr><th><i>Rhodophana griseobrunnea</i> LUG 19799</th><td>MT580804</td><td>MT580803</td><td>France</td><td>–</td></tr><tr><th><i>Rhodophana nitellina</i> TU106939</th><td>UDB015654</td><td>–</td><td>Estonia</td><td>–</td></tr><tr><th><i>Rhodophana nitellina</i> TU106585</th><td>UDB011813</td><td>–</td><td>Estonia</td><td>–</td></tr><tr><th><i>Rhodophana squamulosa</i> CAL:1262</th><td>KT180329</td><td>NG060152</td><td>India</td><td>Raj <i>et al.</i> 2016</td></tr></tbody></table>
Fig. 2 in Clitopilus cretoalbus sp. nov. (Entolomataceae, Agaricales), a new species from Pakistan
Fig. 2. Phylogenetic tree of Clitopilus cretoalbus A.Izhar, Zaman, M.Asif, H.Bashir, Niazi & Khalid sp. nov. based on nrLSU sequences. Sequences generated from Pakistani collections are in bold.
Fig. 3. A–F in Clitopilus cretoalbus sp. nov. (Entolomataceae, Agaricales), a new species from Pakistan
Fig. 3. A–F. Morphology of Clitopilus cretoalbus A.Izhar, Zaman, M.Asif, H.Bashir, Niazi & Khalid sp. nov. A–B. Basidiomata of Skp102 (holotype, LAH35709). C–D. Basidiomata of Skp106 (LAH37112) in natural habitat. E–F. Basidiomata of MN16 (LAH37017). Photographs by Aiman Izhar, Muhammad Asif & Zaman Khan. Scale bars = 10 mm.
Fig. 1 in Clitopilus cretoalbus sp. nov. (Entolomataceae, Agaricales), a new species from Pakistan
Fig. 1. Phylogenetic tree of Clitopilus cretoalbus A.Izhar, Zaman, M.Asif, H.Bashir, Niazi & Khalid sp. nov. based on nrITS sequences. Sequences generated from Pakistani collections are in bold.
Fig. 4. A–F in Clitopilus cretoalbus sp. nov. (Entolomataceae, Agaricales), a new species from Pakistan
Fig. 4. A–F. Microscopic characters of Clitopilus cretoalbus A.Izhar, Zaman, M.Asif, H.Bashir, Niazi & Khalid sp. nov. (Skp102). A. Basidia. B. Basidiospores. C. Cheilocystidia. D. Pileipellis. E. Stipitipellis. Drawings by Aiman Izhar. Scale bars = 10 μm.
FIGURE 6 in Fine-scale diversity in Rhodocybe mellea (Entolomataceae, Basidiomycota), with a description of a new variety and notes on sclerotia formation in Rhodocybe
FIGURE 6. Genetic transitive graph based on a dataset of nrITS sequences from R. mellea complex using the Hamming distance (cutoff point = 100). Each point is labelled with the specimen voucher and its location, while the lines are numbered with Hamming distance values.
FIGURE 4 in Fine-scale diversity in Rhodocybe mellea (Entolomataceae, Basidiomycota), with a description of a new variety and notes on sclerotia formation in Rhodocybe
FIGURE 4. Rhodocybe mellea var. depressa microscopic features (holotype UFRN-Fungos 3386). a Basidiospores. b Basidia and sclerobasidia. c Pseudocystidia. d Pileipellis: suprapellis structure and terminal hyphae. Scale bars: 5 μm. Drawings by A.G.S. Silva-Filho.
FIGURE 5 in Fine-scale diversity in Rhodocybe mellea (Entolomataceae, Basidiomycota), with a description of a new variety and notes on sclerotia formation in Rhodocybe
FIGURE 5. Comparison of pairwise genetic distances within R. mellea complex (n = 5) and between other Rhodocybe s. str. species based on nrITS sequences (n = 7). In the first graph, sequences from the R. mellea complex are represented by the abbreviation of the name of its country of origin: Dom Rep = Dominican Republic, CR = Costa Rica, BR = Brazil, BLZ = Belize.
FIGURE 3 in Fine-scale diversity in Rhodocybe mellea (Entolomataceae, Basidiomycota), with a description of a new variety and notes on sclerotia formation in Rhodocybe
FIGURE 3. Rhodocybe mellea var. depressa microscopic features (holotype UFRN-Fungos 3386). a From L–R: Sclerobasidia, basidia and pseudocystidia. b Basidiospores. c Sclerobasidia. d Pileipellis. a, b and d: in KOH 5%; c: stained in Congo Red. Scale bars: 5 μm. Photos by M.D. Xavier.
FIGURE 2 in Fine-scale diversity in Rhodocybe mellea (Entolomataceae, Basidiomycota), with a description of a new variety and notes on sclerotia formation in Rhodocybe
FIGURE 2. Photographs of the habitat and fresh basidiomata of Rhodocybe mellea var. depressa (holotype UFRN-Fungos 3386). a Basidiomata. b Coastal Tableland, Savanna vegetation. Scale bars: 10 mm. Photos by J.O. Sousa and F. Wartchow.
FIGURE 1 in Fine-scale diversity in Rhodocybe mellea (Entolomataceae, Basidiomycota), with a description of a new variety and notes on sclerotia formation in Rhodocybe
FIGURE 1. ML phylogeny based on combined nrITS and nrLSU sequences of Entolomataceae. Rhodocybe mellea var. depressa is indicated in blue. The names in red are sequences from Central and South America. For each sequence the current name and specimen voucher are provided. Thickened branches indicate those with maximum ML bootstrap values and Bayesian posterior probability (100 % BS / 1.0 BPM). Bootstrap values and posterior probabilities are indicated only if they exceed 80 % BS / 0.95 BPM. The scale bar represents the expected number of nucleotide changes per site.
FIGURE. Entoloma argus: a. basidiospores; b, c. basidia; d. cheilocystidia (a, b, d, from LE F-312694, holotype; c, from LE F-315915). Scale bars 10 μm. Drawings by O. Morozova. in Four new species of Entoloma (Entolomataceae, Agaricomycetes) subgenera Cyanula and Claudopus from Vietnam and their phylogenetic position
FIGURE. Entoloma argus: a. basidiospores; b, c. basidia; d. cheilocystidia (a, b, d, from LE F-312694, holotype; c, from LE F-315915). Scale bars 10 μm. Drawings by O. Morozova.
FIGURE 0 in Four new species of Entoloma (Entolomataceae, Agaricomycetes) subgenera Cyanula and Claudopus from Vietnam and their phylogenetic position
FIGURE 0. Entoloma daphnis: a. basidiospores; b. basidium (all from LE F-262915, holotype). Scale 10 μm. Drawings by O. Morozova.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.