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4 results for “Enzymology”
Optimized photochemistry and enzymology enable efficient analysis of RNA structures and interactions in cells
GEO Series GSE149493. Homo sapiens; Mus musculus. 21 samples. Type: Expression profiling by high throughput sequencing; Other.
Unusual enzymology and peptide natural products from novel Acidobacteriota spp. associated with reef-building corals
<h1>Unusual enzymology and peptide natural products from novel Acidobacteriota spp. associated with reef-building corals</h1> <p>Raw Data for characterisation of RiPP BGCs from Acidobacteriota:</p> <h2>Plasmids</h2> <p>Plasmid maps of constructs used for heterologous production of precursors and maturases in<em> E. coli</em> in .gb format.</p> <h2>Aci</h2> <p>.raw LC-MS files of proteolytic digests (GluC) of AciA1 and AciA2 produced with or without AciKC.</p> <h2>Tha</h2> <p>.raw LC-MS files of proteolytic digests (Try or AspN) of ThaA produced with or without ThaM and/or ThaO.<br>Subfolders include LC-MS files of 13C and 15N labelling data, derivatisation with IAA, RaneyNi, and Marfey's reagent, and point mutants.</p> <h2>The</h2> <p>.raw LC-MS files of proteolytic digests (AspN) of native TheA produced with or without TheO/ TheB/ TheM/ TheN, as well as LC-MS files of proteolytic digests (AspN or Try) of point mutants, truncations and cargo-fusions produced in the presence of TheO or without.<br>Additional subfolders include MS/MS data and plasmids as .gb files.</p> <h2>NMR</h2> <p>Raw data files for 1H (1), 1H-1H COSY (2), NOESY (3), HSQC (4), and HMBC (5) spectra of purified and modified tryptic fragment of ThaA.</p> <h2>MolecularNetworking</h2> <p>Output files generated from GNPS (one folder for the pellet network and one for the supernatant network).</p> <h2>CrudeExtracts</h2> <p>.raw LC-MS files of crude extracts from <em>S. corallicola</em> supernatant (SN) or pellet (P) cultured with and without coral-derived dissolved organic matter. Extracts from medium with or without DOM (but no <em>S. corallicola</em>) are labelled with "_neg".</p> <h2>RNAseq</h2> <p>R script and input files--including raw feature counts, plasmidsaurus feature annotations, antiSMASH feature annotations and DESeq2 results--used to analyse BGC transciption data from cultivating <em>S. corallicola</em> with and without coral-dervied dissolved organic matter.</p> <h2>CellCounts</h2> <p>Raw data files, metadata, and modified cell count data from cultivating <em>S. corallicola</em> with and without coral-dervied dissolved organic matter.</p>
Tracking replication enzymology in vivo by genome-wide mapping of ribonucleotide incorporation
GEO Series GSE62181. Saccharomyces cerevisiae. 29 samples. Type: Other.
Reduced cellular levels of DNA polymerase delta alter replication-fork dynamics and enzymology, and globally impair lagging-strand processing
GEO Series GSE141884. Saccharomyces cerevisiae. 54 samples. Type: Other.
ScienceDex guides
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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.