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Dataset results
14 results for “FDR”
Picked Protein Group FDR
<p>Accompanying MaxQuant, Percolator and Picked Protein Group FDR files to reproduce results in the publication "Re-analysis of ProteomicsDB using an accurate, sensitive and scalable false discovery rate estimation approach for protein groups". The code for reproducing Protein Group FDRs is available on GitHub at https://github.com/kusterlab/picked_group_fdr</p> <p>Use the unpack.sh bash script included here to unpack all archives, or adapt it to only unpack subsets of the data.</p>
Boardwalk Souvenir - Bust of FDR
A painted plaster bust of Franklin Delano Roosevelt from the Santa Cruz Beach Boardwalk. 1930s From the collections of the Santa Cruz Museum of Art and History. Source: Objaverse 1.0 / Sketchfab
Study of the Combination Therapy of Rt-PA and Eptifibatide to Treat Acute Ischemic Stroke (CLEAR-FDR)
ClinicalTrials.gov study NCT01977456. IPD Sharing: Not stated. Countries: 1. Publications: 1.
A Study of Neoadjuvant FOLFIRINOX and FDR-Gemcitabine With Concurrent IMRT in Patients
ClinicalTrials.gov study NCT01661088. IPD Sharing: Not stated. Countries: 1. Publications: 1.
Count RNA-seq data used for benchmarking FDR control methods
<p>This submission contains three DESeqDataSet objects with RNA-seq count data.<br> <br> The files "rnaseq-brain-counts.rds" and "gsea-human-counts.rds" contain subsets of the GTEx data. These samples were downloaded using the Short Read Archive Toolkit and mapped to the human reference genome version GRCh38 using STAR v2.4.2a. htseq-count was used to tabulate the number of uniquely mapping reads for each gene. We used the DESeq2 format the data into DESeqDataSet objects. File "rnaseq-brain-counts.rds" contains 20 samples from two regions of the human basal ganglia, the nucleus accumbens and the putamen. FIle "gsea-human-counts.rds" contains 10 samples (6 cerebellum and 4 cortex samples). <br> <br> The file "gsea-human-counts.rds" contains RNA-seq count data from mouse hematopoietic stem cells and multipotent progrenitors (Cabezas-Wallscheid et al. Cell Stem Cell, 2014). The raw fastq data is available through the ArrayExpress database (<a href="http://www.ebi.ac.uk/arrayexpress">http://www.ebi.ac.uk/arrayexpress</a>) under accession number E-MTAB-2262. These data were mapped to the mouse reference genome GRCm38 (ENSEMBL release 69) using the Genomic Short-Read Nucleotide Alignment program (version 2012-07-20). We used htseq-count to count the number of reads overlapping with each gene and used the DESeq2 package to format the data as a DESeqDataSet R object.</p>
Figures 8-15 from: Sousa FDR, Elmoor-Loureiro LMA, Santos S (2016) Position of the dentifera-group in the Coronatella-branch and its relocation to a new genus: Magnospina gen. n. (Crustacea, Chydoridae, Aloninae). ZooKeys 586: 95-119. https://doi.org/10.3897/zookeys.586.8209
Figures 8-15 - Magnospina dentifera comb. n., parthenogenetic females. 8 head shield 9 main head pores, female juvenile 10 labral kell 11 antennule 12 antenna 13 –14 postabdomen 15 postabdominal claw. Scale bars: 50 µm.
Figures 27-33 from: Sousa FDR, Elmoor-Loureiro LMA, Santos S (2016) Position of the dentifera-group in the Coronatella-branch and its relocation to a new genus: Magnospina gen. n. (Crustacea, Chydoridae, Aloninae). ZooKeys 586: 95-119. https://doi.org/10.3897/zookeys.586.8209
Figures 27-33 - Magnospina dentifera comb. n., adult male from Henrique Pond, Brasília National Park, Distrito Federal, Brazil. 27 habitus 28 antennule 29 antenna 30 postabdomen 31 postabdominal claw 32 limb I, IDL and ODL 33 limb I, copulatory hook. Scale bars: 50 µm (27–30); 25 µm (31–33).
Figures 1-7 from: Sousa FDR, Elmoor-Loureiro LMA, Santos S (2016) Position of the dentifera-group in the Coronatella-branch and its relocation to a new genus: Magnospina gen. n. (Crustacea, Chydoridae, Aloninae). ZooKeys 586: 95-119. https://doi.org/10.3897/zookeys.586.8209
Figures 1-7 - Magnospina dentifera comb. n., parthenogenetic female. 1 habitus from Pantanal, Mato Grosso do Sul, Brazil 2 habitus from São Paulo, Brazil 3–4 habitus from San Pedro, Argentina parthenogenetic female adult from 5 habitus, parthenogenetic female juvenile from San Pedro, Argentina 6 ventral margin of carapace from Distrito Federal, Brazil 7 denticles on the posteroventral margin of carapace. Scale bars: 50 µm.
Figures 16-26 from: Sousa FDR, Elmoor-Loureiro LMA, Santos S (2016) Position of the dentifera-group in the Coronatella-branch and its relocation to a new genus: Magnospina gen. n. (Crustacea, Chydoridae, Aloninae). ZooKeys 586: 95-119. https://doi.org/10.3897/zookeys.586.8209
Figures 16-26 - Magnospina dentifera comb. n., adult parthenogenetic females. 16 limb I 17 limb I, gnathobase 18–19 limb I, IDL and ODL 20 limb II 21 limb III, exopod 22 limb III, endites 23 limb IV, exopod 24 limb IV, endites 25 limb V 26 limb V, internal lobe. Scale bars: 50 µm.
Single cell analysis of senescent cells of old p16-FDR mice (lung)
GEO Series GSE162921. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing.
The FDR (Femoral Derotaton) Trail.
ClinicalTrials.gov study NCT04086368. IPD Sharing: Not stated. Countries: 1. Publications: 0.
Neoadjuvant FDR GX in Locally Advanced Pancreatic Cancer
ClinicalTrials.gov study NCT01268384. IPD Sharing: Not stated. Countries: 1. Publications: 0.
Single cell analysis of senescent cells of old p16-FDR mice (heart)
GEO Series GSE162922. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing.
Single cell analysis of senescent cells of old p16-FDR mice (kidney)
GEO Series GSE162923. Mus musculus. 1 samples. Type: Expression profiling by high throughput sequencing.
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International Brain Laboratory public data
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OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.