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datasets available to search
ShareScore release 0.9.0
Dataset results
19 results for “Filamentous fungi”
Figure 1 in A conspectus of the filamentous marine fungi of Sweden
Figure 1: Amylocarpus encephaloides. (A–B) Ascomata on the surface of wood. Scale bars = 500 µm. (C) Section of ascoma with centrum with ascospores. Scale bar = 130 µm. (D–E) Higher magnification of the ascoma wall. Scale bars = 30 µm (D) 20 µm (E). (F–I) Ascospores with radiating appendages. Rehydrated herbarium material (Santesson No. 11392, collected in 1956). Scale bars = 10 µm.
Figure 2 in A conspectus of the filamentous marine fungi of Sweden
Figure 2: Marine fungi of Sweden. (A) Remispora cucullata; (B) Corollospora angusta; (C) Corollospora filiformis; (D) Ocostaspora apilongissima; (E) Lulwoana uniseptata; (F) Argentinomyces sp.; (G) Remispora maritima; (H) Havispora longyearbyenensis; (I) Lautisporopsis circumvestita; (J) Remispora pilleata. Scale bars = 10 µm.
An Interpretable Framework to Characterize Compound Treatments on Filamentous Fungi using Cell Painting and Deep Metric Learning
<p>This deposit contains:</p> <ul> <li>{train,test,val}.csv: Meta-data files</li> <li>images.tar.gz: Archive of images</li> <li>checkpoint.pth.tar: Model weights</li> <li>code.tar.gz: Code necessary to reproduce our experiments.</li> </ul>
Multienzymatic biotransformation of flavokawain B by entomopathogenic filamentous fungi
<p>The record contains raw data regarding the publication: Chlipała P,* Tronina T, Dymarska M, Urbaniak M, Kozłowska E, Stępień Ł, Kostrzewa-Susłow E, Janeczko T.* "Multienzymatic biotransformation of flavokawain B by entomopathogenic filamentous fungi: structural modifications and pharmacological predictions." Microbial Cell Factories, 2024, 23:65. https://doi.org/10.1186/s12934-024-02338-9.</p> <p>In the "UPLC data" folder, chromatograms are available depicting substrate conversions in cultures of investigated microorganisms over time. In the "NMR data of isolated biotransformation products" folder, NMR spectra of substrates and isolated/purified biotransformation products are provided.</p>
Cresemba® in Treating Chinese Patients With IFD Caused by Aspergillus Species or Other Filamentous Fungi
ClinicalTrials.gov study NCT05630976. IPD Sharing: YES. Countries: 1. Publications: 0.
Data from: Biotransformation of labdane and halimane diterpenoids by two filamentous fungi strains
Open the record for dataset details and reuse information.
Identification of three enzymes of the vanillin and vanillic acid metabolic pathway in the filamentous fungi Aspergillus niger
GEO Series GSE154865. Aspergillus niger. 8 samples. Type: Expression profiling by high throughput sequencing.
Conservation and divergence in the asexual development gene regulatory network across a genus of filamentous fungi [RNA-seq]
GEO Series GSE114143. Aspergillus nidulans; Aspergillus fumigatus. 4 samples. Type: Expression profiling by high throughput sequencing.
Erythromycin mediates co-flocculation between cyanobacterium Synechocystis sp. PCC 6803 and filamentous fungi in liquid cultivation without organic compounds.
GEO Series GSE244152. Synechocystis sp. PCC 6803. 6 samples. Type: Expression profiling by high throughput sequencing.
A chromosome-scale assembly of the smallest Dothideomycete genome reveals a unique genome compaction mechanism in filamentous fungi
GEO Series GSE121872. Peltaster fructicola. 3 samples. Type: Expression profiling by high throughput sequencing.
Large-scale transcriptomic analyses reveal a global co-expression network of cellulase and xylanase genes in filamentous fungi
GEO Series GSE133258. Penicillium oxalicum. 72 samples. Type: Expression profiling by high throughput sequencing.
Cyclophilin acts as a ribosome biogenesis factor by chaperoning the ribosomal protein in filamentous fungi
GEO Series GSE179712. Purpureocillium lilacinum. 6 samples. Type: Expression profiling by high throughput sequencing.
Metabolic regulation of filamentous fungi is tailored for secondary secondary metabolite production
GEO Series GSE106983. Penicillium coprophilum; Penicillium decumbens; Penicillium flavigenum; Penicillium polonicum; Penicillium nalgiovense; Penicillium steckii. 36 samples. Type: Expression profiling by high throughput sequencing.
Retrospective Study of Invasive Fungal Infections With Filamentous Fungi in Heart Transplant Patients
ClinicalTrials.gov study NCT06498310. IPD Sharing: Not stated. Countries: 1. Publications: 0.
Erythromycin mediates co-flocculation between cyanobacterium Synechocystis sp. PCC 6803 and filamentous fungi in liquid cultivation without organic compounds [C and CE]
GEO Series GSE256451. Synechocystis sp. PCC 6803. 6 samples. Type: Expression profiling by high throughput sequencing.
Conservation and divergence in the asexual development gene regulatory network across a genus of filamentous fungi
GEO Series GSE114167. Aspergillus nidulans; Aspergillus fumigatus. 8 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
Erythromycin mediates co-flocculation between cyanobacterium Synechocystis sp. PCC 6803 and filamentous fungi in liquid cultivation without organic compounds [CE and CEF]
GEO Series GSE256452. Synechocystis sp. PCC 6803. 6 samples. Type: Expression profiling by high throughput sequencing.
Conservation and divergence in the asexual development gene regulatory network across a genus of filamentous fungi [ChIP-seq]
GEO Series GSE114141. Aspergillus nidulans. 4 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Fungal oxylipins direct programmed developmental switches in filamentous fungi
GEO Series GSE156537. Aspergillus fumigatus. 16 samples. Type: Expression profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.