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6 results for “General Lake Model”
North Temperate Lakes LTER General Lake Model Parameter Set for Lake Mendota, Summer 2016 Calibration
The General Lake Model (GLM), an open source, one-dimensional hydrodynamic model, was used to simulate various physical, chemical, and biological variables on Lake Mendota between 15 April 2016 and 11 November 2016. GLM (v.2.1.8) was coupled to the Aquatic EcoDynamics (AED) module library via the Framework for Aquatic Biogeochemical Modeling (FABM). GLM-AED requires four major “scripts†to run the model. First, the glm2.nml file configures lake metadata, meteorological driver data, stream inflow and outflow driver data, and physical response variables. Second, the aed2.nml file configures various biogeochemical modules for the simulation of oxygen, carbon, phosphorus, and nitrogen, among others. Third, aed2_phyto_pars.nml configures all parameters pertaining to phytoplankton dynamics. And fourth, aed2_zoop_pars.nml configures all parameters pertaining to zooplankton dynamics. This dataset contains parameter descriptions and values as they were used to simulate organic carbon and greenhouse gas production on Lake Mendota in summer 2016. Meteorological data and stream files used in this calibration are also included in this dataset. Additional methods and model descriptions can be found in J.A. hart’s Masters Thesis, University of Wisconsin-Madison Center for Limnology, May 2017. Readers are referred to the GLM (Hipsey et al. 2014) and AED (Hipsey et al. 2013) science manuals for further details on model configuration.
General Lake Model-Aquatic EcoDynamics model parameter set for Falling Creek Reservoir, Vinton, Virginia, USA 2013-2019
The General Lake Model (GLM), an open-source, one-dimensional hydrodynamic model, was used to simulate physical, chemical, and biological variables in Falling Creek Reservoir, Vinton, Virginia, USA between 15 May 2013 and 31 December 2019. GLM (v.3.2.0a3) was coupled to the Aquatic EcoDynamics (AED) module library via the Framework for Aquatic Biogeochemical Modeling (FABM). GLM-AED requires three configuration files to run the model. First, the glm3.nml file configures lake metadata (including hypsometry), meteorological driver data, stream inflow and outflow driver data files, and physical response variables (mixing parameters and sediment heat zones). Second, the aed2_20220111_2DOCpools.nml file configures various biogeochemical modules for the simulation of oxygen, carbon, silica, nitrogen, phosphorus, organic matter, and phytoplankton. Third, the aed2_phyto_pars_4Jan2022.nml file configures all parameters pertaining to phytoplankton dynamics. Meteorological data, two surface stream inflow files, a submerged oxygenation inflow file, and outflow file used in this calibration are also included.
Lake Sunapee Parameter Set and Driver Files for the General Lake Model Aquatic EcoDynamics (GLM AED)
Base driver data and parameter sets required for the General Lake Model - Aquatic EcoDynamics (GLM-AED) model simulation of Lake Sunapee, NH, USA. Additional files needed to run the simulation are the downscaled hourly meteorological data (North American Land Data Assimilation System NLDAS-2, website: disc.gsfc.nasa.gov), observed water temperature profiles and dissolved oxygen at the deep site in the lake (edi.463.1; doi.org/10.6073/pasta/846a36bf6fd704e508511e5f8a2ab3b5), and stream water temperature (edi.466.1; doi.org/10.6073/pasta/12a18d9d178b17d2ac333930f3efca9f).
Data from: Some like it cold: A general habitat association model for smallmouth bass in stratified lakes
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Ensembled projection outputs of Lake Sunapee using multiple General Circulation models and Lake models
<p>This dataset contains the ensemble projection output of Lake Sunapee, NH. The conception and methods of the dataset is explained in the manuscript "Uncertainty in projections of future lake thermal dynamics is differentially driven by global climate models and lake models."</p>
Dataset to develop the Generalized Linear Models in "THE CRITICAL ROLE OF HYDROLOGICAL DISTANCE IN SHAPING NUTRIENT DYNAMICS ALONG THE WATERSHED-LAKE CONTINUUM"
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.