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Figure 3. The phylogenetic relationship between G in The Complete Mitochondrial Genome of Glischropus bucephalus (Vespertilionidae; Chiroptera) Provides New Evidence for Pipistrellus Paraphyly
Figure 3. The phylogenetic relationship between G. bucephalus and the other Pipistrellini species is inferred by maximum likelihood analysis based on cytb sequences. The numbers in the branches show the bootstrap values. Vespertilio species are used as outgroups.
Figure 1 in The Complete Mitochondrial Genome of Glischropus bucephalus (Vespertilionidae; Chiroptera) Provides New Evidence for Pipistrellus Paraphyly
Figure 1. Map of the G. bucephalus mitogenome. Gray color indicates the PCG regions; red color— tRNAs; yellow color—rRNAs. The heavy strand in the outer circle encodes 28 genes, whereas 9 genes are encoded in the light strand in the inner circle.
Figure 2. The phylogenetic relationship between G in The Complete Mitochondrial Genome of Glischropus bucephalus (Vespertilionidae; Chiroptera) Provides New Evidence for Pipistrellus Paraphyly
Figure 2. The phylogenetic relationship between G. bucephalus and the other Vespertilioninae species is inferred by the maximum likelihood analysis based on the concatenated protein-coding gene sequences. The bootstrap values (indicated by the slashes on the branches) correspond to the trees constructed on full sequences (three codon positions), the first two codon positions (third positions omitted), and two positions with the exclusion of the Nd6 gene. The asterisks mark branches that in the second or third case have a different topology than shown. Myotis species are used as outgroups.
Table 2 in The Complete Mitochondrial Genome of Glischropus bucephalus (Vespertilionidae; Chiroptera) Provides New Evidence for Pipistrellus Paraphyly
<p><b>Table 2.</b> GenBank accession numbers for mitochondrion and <i>cytb</i> sequences used in analysis.</p><table><tbody><tr><th>Species</th><th>Mitochondrion</th><th>cytb</th></tr></tbody><tbody><tr><th><i>Glischropus aquilus</i></th><td></td><td>KR612333.1</td></tr><tr><th><i>G. bucephalus</i></th><td>OR667258</td><td>KR612331.1, KR612332.1, OR667259, OR667260, OR667261</td></tr><tr><th><i>G. tylopus</i></th><td></td><td>JX570898.1, EU521632.1, OR667262, OR667263</td></tr><tr><th><i>“</i> <i>Pipistrellus coromandra”</i></th><td>NC_029191.1</td><td>NC_029191.1</td></tr><tr><th><i>Nyctalus aviator</i></th><td>NC_060309.1</td><td>NC_060309.1, MK167360.1</td></tr><tr><th><i>N. labiata</i></th><td>NC_027237.1, NC_041160.1</td><td>NC_027237.1, NC_041160.1, KX467596.1</td></tr><tr><th><i>N. lasiopterus</i></th><td></td><td>DQ120867.1, EU360680.1, JX570900.1</td></tr><tr><th><i>N. leisleri</i></th><td></td><td>DQ120877.1, JX570901.1, EU360690.1</td></tr><tr><th><i>N. noctula</i></th><td>MN122876.1, MN122907.1</td><td>MN122907.1, MN122876.1, DQ120872.1</td></tr><tr><th><i>Pipistrellus abramus</i></th><td>KX355640.1, NC_005436.1</td><td>GQ332529.1, KX355640.1, NC_005436.1</td></tr><tr><th><i>P. deserti</i></th><td></td><td>KM252759.1</td></tr><tr><th><i>P. coromandra</i></th><td></td><td>OR667264, OR667265, OR667266, OR667267</td></tr><tr><th><i>P. dhofarensis</i></th><td></td><td>KX375145.1, KX375148.1</td></tr><tr><th><i>P. hesperidus</i></th><td></td><td>MN790830.1, MT778037.1, MN790820.1</td></tr><tr><th><i>P. javanicus</i></th><td></td><td>KX496357.1</td></tr><tr><th><i>P. kuhlii</i></th><td>KU058655.1</td><td>KU058655.1, DQ120845.1, EU360657.1</td></tr><tr><th><i>P. maderensis</i></th><td></td><td>KC520771.1, KC520774.1, MT374272.1</td></tr><tr><th><i>P. nanulus</i></th><td></td><td>MK188530.1</td></tr><tr><th><i>P. nathusii</i></th><td>MN122914.1</td><td>MN122914.1, AJ504446.1, DQ120849.1</td></tr><tr><th><i>P. paterculus</i></th><td></td><td>OR667268, OR667269, OR667270</td></tr><tr><th><i>P. pipistrellus</i></th><td>LR862378.1</td><td>KF874520.1, DQ120853.1, LR862378.1</td></tr><tr><th><i>P. pygmaeus</i></th><td>MN122927.1, OX465325.1</td><td>MN122927.1, OX465325.1, EU084882.1</td></tr><tr><th><i>P. raceyi</i></th><td></td><td>KM886094.1, KM886088.1</td></tr><tr><th><i>P. rusticus</i></th><td></td><td>KX375166.1, KX375167.1</td></tr><tr><th><i>P. stenopterus</i></th><td></td><td>MH540194.1</td></tr><tr><th><i>Plecotus auritus</i></th><td>MN122881.1, MT410875.1</td><td></td></tr><tr><th><i>P. macrobullaris</i></th><td>KR134372.1, KR134385.1</td><td></td></tr><tr><th><i>Hypsugo alaschanicus</i></th><td>MF459671.1, MK135784.1, NC_029939.1</td><td></td></tr><tr><th><i>Lasionycteris noctivagans</i></th><td>MT774150.1, MT774151.1, NC_050995.1</td><td></td></tr><tr><th><i>Chalinolobus tuberculatus</i></th><td>NC 002626.1</td><td></td></tr><tr><th><i>Eptesicus bottae</i></th><td>NC_070014.1, OP328299.1, OP328300.1</td><td></td></tr><tr><th><i>E. nilssonii</i></th><td>OX621305.1</td><td></td></tr><tr><th><i>Vespertilio murinus</i></th><td>NC_033347.1</td><td>NC_033347.1</td></tr><tr><th><i>V. sinensis</i></th><td>KJ081440.1, KM092493.1.</td><td>KJ081440.1, KM092493.1.</td></tr><tr><th><i>Myotis brandtii</i></th><td>NC_025308.1</td><td></td></tr><tr><th><i>M. horsfieldii</i></th><td>MF143494.1</td><td></td></tr><tr><th><i>M. muricola</i></th><td>KT213444.1</td><td></td></tr></tbody></table>
Table 3 in The Complete Mitochondrial Genome of Glischropus bucephalus (Vespertilionidae; Chiroptera) Provides New Evidence for Pipistrellus Paraphyly
<p><b>Table 3.</b> Gene organization and characterization of the <i>G. bucephalus</i> mitogenome.</p><table><tbody><tr><th></th><th><b>Start Position</b></th><th><b>Stop Position</b></th><th><b>Length (bp)</b></th><th><b>Anticodon</b></th><th><b>Start Codon</b></th><th><b>Stop Codon</b></th><th><b>Strand</b></th></tr></tbody><tbody><tr><th>tRNAPhe</th><td>1</td><td>73</td><td>73</td><td>GAA</td><td></td><td></td><td>+</td></tr><tr><th>12S rRNA</th><td>74</td><td>1010</td><td>937</td><td></td><td></td><td></td><td>+</td></tr><tr><th>tRNAVal</th><td>1011</td><td>1078</td><td>68</td><td>TAC</td><td></td><td></td><td>+</td></tr><tr><th>16S rRNA</th><td>1079</td><td>2644</td><td>1566</td><td></td><td></td><td></td><td>+</td></tr><tr><th>tRNALeu</th><td>2650</td><td>2725</td><td>76</td><td>TAA</td><td></td><td></td><td>+</td></tr><tr><th>Nd1</th><td>2731</td><td>3684</td><td>954</td><td></td><td>ATG</td><td>TA-</td><td>+</td></tr><tr><th>tRNAIle</th><td>3687</td><td>3755</td><td>69</td><td>GAT</td><td></td><td></td><td>+</td></tr><tr><th>tRNAGln</th><td>3753</td><td>3827</td><td>75</td><td>TTG</td><td></td><td></td><td>-</td></tr><tr><th>tRNAMet</th><td>3828</td><td>3896</td><td>69</td><td>CAT</td><td></td><td></td><td>+</td></tr><tr><th>Nd2</th><td>3897</td><td>4937</td><td>1041</td><td></td><td>ATT</td><td>T-</td><td>+</td></tr><tr><th>tRNATrp</th><td>4939</td><td>5005</td><td>67</td><td>TCA</td><td></td><td></td><td>+</td></tr><tr><th>tRNAAla</th><td>5013</td><td>5081</td><td>69</td><td>TGC</td><td></td><td></td><td>-</td></tr><tr><th>tRNAAsn</th><td>5082</td><td>5154</td><td>73</td><td>GTT</td><td></td><td></td><td>-</td></tr><tr><th>OR</th><td>5155</td><td>5189</td><td>35</td><td></td><td></td><td></td><td></td></tr><tr><th>tRNACys</th><td>5187</td><td>5252</td><td>66</td><td>GCA</td><td></td><td></td><td>-</td></tr><tr><th>tRNATyr</th><td>5253</td><td>5319</td><td>67</td><td>GTA</td><td></td><td></td><td>-</td></tr><tr><th>Cox1</th><td>5321</td><td>6862</td><td>1542</td><td></td><td>ATG</td><td>TAA</td><td>+</td></tr><tr><th>tRNASer</th><td>6869</td><td>6937</td><td>69</td><td>TGA</td><td></td><td></td><td>-</td></tr><tr><th>tRNAAsp</th><td>6945</td><td>7011</td><td>67</td><td>GTC</td><td></td><td></td><td>+</td></tr><tr><th>Cox2</th><td>7012</td><td>7692</td><td>681</td><td></td><td>ATG</td><td>TAA</td><td>+</td></tr><tr><th>tRNALys</th><td>7699</td><td>7765</td><td>67</td><td>TTT</td><td></td><td></td><td>+</td></tr><tr><th>ATP8</th><td>7767</td><td>7967</td><td>201</td><td></td><td>ATG</td><td>TAA</td><td>+</td></tr><tr><th>ATP6</th><td>7928</td><td>8605</td><td>678</td><td></td><td>ATG</td><td>TAA</td><td>+</td></tr><tr><th>Cox3</th><td>8608</td><td>9390</td><td>783</td><td></td><td>ATG</td><td>TA-</td><td>+</td></tr><tr><th>tRNAGly</th><td>9392</td><td>9460</td><td>69</td><td>TCC</td><td></td><td></td><td>+</td></tr><tr><th>Nd3</th><td>9461</td><td>9805</td><td>345</td><td></td><td>ATT</td><td>TA-</td><td>+</td></tr><tr><th>tRNAArg</th><td>9809</td><td>9878</td><td>70</td><td>TCG</td><td></td><td></td><td>+</td></tr><tr><th>Nd4L</th><td>9880</td><td>10,173</td><td>294</td><td></td><td>ATG</td><td>TAA</td><td>+</td></tr><tr><th>Nd4</th><td>10,170</td><td>11,546</td><td>1377</td><td></td><td>ATG</td><td>T-</td><td>+</td></tr><tr><th>tRNAHis</th><td>11,548</td><td>11,616</td><td>69</td><td>GTG</td><td></td><td></td><td>+</td></tr><tr><th>tRNASer</th><td>11,617</td><td>11,675</td><td>59</td><td>GCT</td><td></td><td></td><td>+</td></tr><tr><th>tRNALeu</th><td>11,676</td><td>11,745</td><td>70</td><td>TAG</td><td></td><td></td><td>+</td></tr><tr><th>Nd5</th><td>11,764</td><td>13,552</td><td>1789</td><td></td><td>ATA</td><td>TAA</td><td>+</td></tr><tr><th>Nd6</th><td>13,544</td><td>14,062</td><td>519</td><td></td><td>ATG</td><td>TAA</td><td>-</td></tr><tr><th>tRNAGlu</th><td>14,066</td><td>14,133</td><td>68</td><td>TTC</td><td></td><td></td><td>-</td></tr><tr><th>CytB</th><td>14,139</td><td>15,275</td><td>1137</td><td></td><td>ATG</td><td>AGA</td><td>+</td></tr><tr><th>tRNAThr</th><td>15,279</td><td>15,348</td><td>70</td><td>TGT</td><td></td><td></td><td>+</td></tr><tr><th>tRNAPro</th><td>15,348</td><td>15,416</td><td>69</td><td>TGG</td><td></td><td></td><td>-</td></tr><tr><th>D-loop</th><td>15,416</td><td>17,023</td><td>1608</td><td></td><td></td><td></td><td></td></tr></tbody></table>
Table 1 in The Complete Mitochondrial Genome of Glischropus bucephalus (Vespertilionidae; Chiroptera) Provides New Evidence for Pipistrellus Paraphyly
<p><b>Table 1.</b> Model types for protein-coding gene analysis configured by IQtree ModelFinder through ultrafast bootstrap (10,000 replicates) for the phylogenetic tree with 3 codons.</p><table><tbody><tr><th>Model Type</th><th></th><th></th><th></th><th></th><th></th><th></th><th>Gene</th><th></th><th></th><th></th><th></th><th></th><th></th></tr></tbody><tbody><tr><th></th><td>ND1</td><td>ND2</td><td>COX1</td><td>COX2</td><td>ATP8</td><td>ATP6</td><td>COX3</td><td>ND3</td><td>ND4L</td><td>ND4</td><td>ND5</td><td>ND6</td><td>CYTB</td></tr><tr><th>GTR+F+G4</th><td>1st pos</td><td></td><td></td><td>1st pos</td><td></td><td>1st pos</td><td></td><td>1st pos</td><td></td><td></td><td></td><td></td><td>1st pos</td></tr><tr><th>TPM3u+F+I+G4</th><td>2nd pos</td><td></td><td>2nd pos</td><td>2nd pos</td><td></td><td>2nd pos</td><td>2nd pos</td><td></td><td></td><td></td><td></td><td></td><td>2rd pos</td></tr><tr><th>TIM+F+I+G4</th><td>3rd pos</td><td>3rd pos</td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td>3rd pos</td></tr><tr><th>TIM2+F+I+G4</th><td></td><td>1st pos</td><td></td><td></td><td>1st pos, 2nd pos</td><td></td><td></td><td></td><td>1st pos</td><td>1st pos</td><td>1st pos</td><td></td><td></td></tr><tr><th>TPM3u+F+I+G4</th><td></td><td>2nd pos</td><td></td><td></td><td></td><td></td><td></td><td>2nd pos</td><td>2nd pos</td><td>2nd pos</td><td>2nd pos</td><td></td><td></td></tr><tr><th>TIM2e+I+G4</th><td></td><td></td><td>1st pos</td><td></td><td></td><td></td><td>1st pos</td><td></td><td></td><td></td><td></td><td></td><td></td></tr><tr><th>TIM2+F+I+G4</th><td></td><td></td><td>3rd pos</td><td>3rd pos</td><td>3rd pos</td><td>3rd pos</td><td></td><td></td><td></td><td></td><td></td><td></td><td></td></tr><tr><th>TN+F+I+G4</th><td></td><td></td><td></td><td></td><td></td><td></td><td>3rd pos</td><td>3rd pos</td><td>3rd pos</td><td>3rd pos</td><td>3rd pos</td><td></td><td></td></tr><tr><th>HKY+F+I+G4</th><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td>1st pos, 2nd pos</td><td></td></tr><tr><th>HKY+F+G4</th><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td>3rd pos</td><td></td></tr></tbody></table>
FIGURE 6 in Thumb-pads up—a new species of thick-thumbed bat from Sumatra (Chiroptera: Vespertilionidae: Glischropus)
FIGURE 6. Maximum likelihood tree based on 404 bp fragment of cytb gene of G. aquilus n. sp. and selected Glischropus, Pipistrellus and Nyctalus species. Tylonycteris robustula was used as an outgroup taxon.
FIGURE 5 in Thumb-pads up—a new species of thick-thumbed bat from Sumatra (Chiroptera: Vespertilionidae: Glischropus)
FIGURE 5. Principal Component Analysis based on one external and three craniodental measurements of G. bucephalus (white circles), G. aquilus n. sp. black squares (singular), G. javanus white squares (singular) and G. tylopus (black circles). Each symbol represents the position of an individual skull projected on the first two principal components, which together accounted for 91% of the total variation.
FIGURE 4. a in Thumb-pads up—a new species of thick-thumbed bat from Sumatra (Chiroptera: Vespertilionidae: Glischropus)
FIGURE 4. a) Lateral view of the mandible and occlusal view of b) left upper and c) right lower dentition of G. aquilus n. sp. holotype (MZB 35030). Scale bars represent 3 mm.
FIGURE 1 in Thumb-pads up—a new species of thick-thumbed bat from Sumatra (Chiroptera: Vespertilionidae: Glischropus)
FIGURE 1. Portraits of live specimens of a) G. aquilus n. sp. holotype from Sumatra (MZB 35030), b) G. bucephalus paratype from Cambodia (HNHM 2006.34.37.), c) G. tylopus from Thailand (HNHM 2009.52.1.). Not to scale.
FIGURE 3 in Thumb-pads up—a new species of thick-thumbed bat from Sumatra (Chiroptera: Vespertilionidae: Glischropus)
FIGURE 3. Lateral views of skulls of a) G. aquilus n. sp. holotype from Sumatra (MZB 35030), b) G. bucephalus holotype from Cambodia (HNHM 2006.94.49.), c) G. tylopus holotype from Borneo (BM(NH) 70.2.10.2), d) G. batjanus holotype from Bacan I. (ZMB 85513), e) G. javanus holotype from Java (RMNH 15323). Scale bar represents 5 mm.
FIGURE 6 in Out of Southeast Asia: A new species of thick-thumbed bat (Chiroptera: Vespertilionidae: Glischropus) from Meghalaya, north-eastern India
FIGURE 6. Dorsal and right lateral views of the baculum of (A) G. meghalayanus n. sp. (ZSIS V/M/ERS/682); (B) G. bucephalus (HNHM 2006.34.4.); and (C). G. tylopus (HNHM 2009.52.1.). Scale = 2 mm.
FIGURE 3 in Out of Southeast Asia: A new species of thick-thumbed bat (Chiroptera: Vespertilionidae: Glischropus) from Meghalaya, north-eastern India
FIGURE 3. Lateral view of skull of the holotypes of (A) G. meghalayanus n. sp. (ZSIS V/M/ERS/682); (B) G. bucephalus (HNHM 2006.34.49.); (C) Glischropus aquilus (MZB 35030); (D) G. tylopus (NHMUK 70.2.10.2); and (E) G. javanus (RMNH 15323). Scale= 5 mm.
FIGURE 2 in Out of Southeast Asia: A new species of thick-thumbed bat (Chiroptera: Vespertilionidae: Glischropus) from Meghalaya, north-eastern India
FIGURE 2. (A) lateral; (B) dorsal; (C) ventral view of cranium; (D) lateral; and (E) ventral view of mandible of the holotype of G. meghalayanus n. sp. (ZSIS V/M/ERS/682).
FIGURE 1 in Out of Southeast Asia: A new species of thick-thumbed bat (Chiroptera: Vespertilionidae: Glischropus) from Meghalaya, north-eastern India
FIGURE 1. External traits of Glischropus meghalayanus n. sp. from Meghalaya (A) habitus; (B) lateral aspect showing fur colouration of the holotype (ZSIS V/M/ERS/682); (C) thumb pad; (D) callosities on the sole; and (E) ventral view of the penis of the paratype (ZSIS V/M/ERS/683) (pictures not to scale).
FIGURE 5 in Out of Southeast Asia: A new species of thick-thumbed bat (Chiroptera: Vespertilionidae: Glischropus) from Meghalaya, north-eastern India
FIGURE 5. Occlusal view of the upper dentition of the holotypes of (A) G. meghalayanus n. sp. (ZSIS V/M/ERS/682); (B) G. bucephalus (HNHM 2006.34.49.); (C) Glischropus aquilus (MZB 35030); (D) G. tylopus (NHMUK 70.2.10.2); and (E) G. javanus (RMNH 15323). Scale= 5 mm.
FIGURE 4 in Out of Southeast Asia: A new species of thick-thumbed bat (Chiroptera: Vespertilionidae: Glischropus) from Meghalaya, north-eastern India
FIGURE 4. Frontal view of left upper incisors of (A) G. meghalayanus n. sp. (holotype, ZSIS V/M/ERS/682); G. bucephalus (holotype, HNHM 2006.34.49.); (B) G. tylopus (NHMUK 10.4.5.68 from Borneo). Scale = 1 mm.
FIGURE 7 in Out of Southeast Asia: A new species of thick-thumbed bat (Chiroptera: Vespertilionidae: Glischropus) from Meghalaya, north-eastern India
FIGURE 7. Records of Glischropus species from the Asian mainland supported by museum vouchers. Star = G. meghalayanus n. sp.; squares= G. bucephalus, triangles= G. tylopus.
FIGURE 3 in A new species of Glischropus from the Indochinese Subregion (Mammalia: Chiroptera: Vespertilionidae)
FIGURE 3. Holotype of Glischropus bucephalus n. sp. (HNHM 2006.34.49.); (A) lateral view of left mandible (B) occlusal view of left upper and (C) right lower toothrows. Scale = 5 mm.
FIGURE 2 in A new species of Glischropus from the Indochinese Subregion (Mammalia: Chiroptera: Vespertilionidae)
FIGURE 2. Lateral view of skulls of (A) Glischropus bucephalus n. sp. (holotype, HNHM 2006.34.49., from Cambodia) (B) G. tylopus (holotype, BM(NH) 70.2.10.2, from Borneo) (C) G. javanus (holotype, RMNH 15323, from Java). Scale = 5 mm.
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