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8
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ShareScore release 0.9.0
Dataset results
8 results for “Grad-seq”
Analytical workflow for "Grad-seq shines light on unrecognized RNA and protein complexes in the model bacterium Escherichia coli", Hör et al. 2020
<p>Analytical workflow including scripts, data and Singularity image for "Grad-seq shines light on unrecognized RNA and protein complexes in the model bacterium Escherichia coli", Hör et al. 2020, (<a href="https://doi.org/10.1101/2020.06.29.177014">https://doi.org/10.1101/2020.06.29.177014</a>)</p>
Enterococcus Grad-seq and KhpB RIP-seq
GEO Series GSE196534. Enterococcus faecium Aus0004; Enterococcus faecalis V583. 46 samples. Type: Expression profiling by high throughput sequencing; Other.
Grad-seq identifies KhpB as a global RNA-binding protein in Clostridioides difficile that regulates toxin production
GEO Series GSE165672. Clostridioides difficile. 40 samples. Type: Expression profiling by high throughput sequencing; Other.
Partitioning of a RNA interactome by gradient profiling (Grad-seq)
GEO Series GSE62988. Salmonella enterica subsp. enterica serovar Typhimurium; Escherichia coli. 24 samples. Type: Expression profiling by high throughput sequencing; Other.
A Grad-seq resource of RNA and protein complexes of Pseudomonas aeruginosa including transcripts of phage ΦKZ
GEO Series GSE157708. Phikzvirus phiKZ; Pseudomonas aeruginosa PAO1. 44 samples. Type: Expression profiling by high throughput sequencing; Other.
Grad-seq shines light on unrecognized RNA and protein complexes in the model bacterium Escherichia coli
GEO Series GSE152974. Escherichia coli. 22 samples. Type: Expression profiling by high throughput sequencing.
Grad-seq in a Gram-positive bacterium reveals exonucleolytic sRNA activation in competence control
GEO Series GSE145604. Streptococcus pneumoniae. 6 samples. Type: Other.
Gradient Sequencing (Grad-Seq) of starved HEK293 cells
GEO Series GSE129911. Homo sapiens. 63 samples. Type: Other.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.